RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 RRS1Q15050 365 aaKnown RBP15.62■□□□□ 0.09
PTCD2-204ENST00000486995 IFT57Q9NWB7 429 aa15.62■□□□□ 0.09
PTCD2-204ENST00000486995 FRAT2O75474 233 aaPredicted RBP15.62■□□□□ 0.09
PTCD2-204ENST00000486995 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
PTCD2-204ENST00000486995 GNAI1P63096 354 aa15.61■□□□□ 0.09
PTCD2-204ENST00000486995 MRPL50Q8N5N7 158 aaKnown RBP15.61■□□□□ 0.09
PTCD2-204ENST00000486995 PRR36Q9H6K5 1346 aa15.61■□□□□ 0.09
PTCD2-204ENST00000486995 KNDC1Q76NI1 1749 aa15.61■□□□□ 0.09
PTCD2-204ENST00000486995 TNRQ92752 1358 aa15.6■□□□□ 0.09
PTCD2-204ENST00000486995 GSE1Q14687 1217 aa15.6■□□□□ 0.09
PTCD2-204ENST00000486995 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-204ENST00000486995 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
PTCD2-204ENST00000486995 TMEM2Q9UHN6 1383 aa15.6■□□□□ 0.09
PTCD2-204ENST00000486995 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
PTCD2-204ENST00000486995 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
PTCD2-204ENST00000486995 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
PTCD2-204ENST00000486995 ROBO2Q9HCK4 1378 aa15.58■□□□□ 0.09
PTCD2-204ENST00000486995 NUCB1Q02818 461 aa15.58■□□□□ 0.08
PTCD2-204ENST00000486995 CFAP44Q96MT7 982 aa15.58■□□□□ 0.08
PTCD2-204ENST00000486995 PIK3R4Q99570 1358 aa15.57■□□□□ 0.08
PTCD2-204ENST00000486995 C3P01024 1663 aa15.57■□□□□ 0.08
PTCD2-204ENST00000486995 ELL2O00472 640 aaPredicted RBP15.57■□□□□ 0.08
PTCD2-204ENST00000486995 TBC1D2Q9BYX2 928 aa15.57■□□□□ 0.08
PTCD2-204ENST00000486995 PTCH1Q13635 1447 aa15.57■□□□□ 0.08
PTCD2-204ENST00000486995 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
PTCD2-204ENST00000486995 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
PTCD2-204ENST00000486995 LMOD3Q0VAK6 560 aa15.56■□□□□ 0.08
PTCD2-204ENST00000486995 AKAP12Q02952 1782 aa15.56■□□□□ 0.08
PTCD2-204ENST00000486995 C8orf58Q8NAV2 365 aa15.56■□□□□ 0.08
PTCD2-204ENST00000486995 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
PTCD2-204ENST00000486995 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
PTCD2-204ENST00000486995 KIF13AQ9H1H9 1805 aa15.55■□□□□ 0.08
PTCD2-204ENST00000486995 SLKQ9H2G2 1235 aaPredicted RBP15.55■□□□□ 0.08
PTCD2-204ENST00000486995 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 UBR1Q8IWV7 1749 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 ABCC4O15439 1325 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 TTC21BQ7Z4L5 1316 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 LTKP29376 864 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
PTCD2-204ENST00000486995 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 CHD1LQ86WJ1 897 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
PTCD2-204ENST00000486995 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
PTCD2-204ENST00000486995 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
PTCD2-204ENST00000486995 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
PTCD2-204ENST00000486995 ACEP12821 1306 aa15.53■□□□□ 0.08
PTCD2-204ENST00000486995 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
PTCD2-204ENST00000486995 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
PTCD2-204ENST00000486995 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.08
PTCD2-204ENST00000486995 C1orf115Q9H7X2 142 aa15.52■□□□□ 0.07
PTCD2-204ENST00000486995 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.52■□□□□ 0.07
PTCD2-204ENST00000486995 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
PTCD2-204ENST00000486995 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
PTCD2-204ENST00000486995 GCC1Q96CN9 775 aa15.51■□□□□ 0.07
PTCD2-204ENST00000486995 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
PTCD2-204ENST00000486995 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
PTCD2-204ENST00000486995 OVOS2A0A0J9YW53 1432 aa15.5■□□□□ 0.07
PTCD2-204ENST00000486995 OVOS2Q6IE36 1432 aa15.5■□□□□ 0.07
PTCD2-204ENST00000486995 NRKQ7Z2Y5 1582 aa15.5■□□□□ 0.07
PTCD2-204ENST00000486995 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
PTCD2-204ENST00000486995 API5Q9BZZ5 524 aaKnown RBP15.49■□□□□ 0.07
PTCD2-204ENST00000486995 USP6P35125 1406 aa15.48■□□□□ 0.07
PTCD2-204ENST00000486995 PTPRUQ92729 1446 aa15.48■□□□□ 0.07
PTCD2-204ENST00000486995 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
PTCD2-204ENST00000486995 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
PTCD2-204ENST00000486995 TOPAZ1Q8N9V7 1692 aa15.48■□□□□ 0.07
PTCD2-204ENST00000486995 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
PTCD2-204ENST00000486995 USP31Q70CQ4 1352 aa15.47■□□□□ 0.07
PTCD2-204ENST00000486995 CHL1O00533 1208 aa15.47■□□□□ 0.07
PTCD2-204ENST00000486995 CEBPAP49715 358 aaPredicted RBP15.47■□□□□ 0.07
PTCD2-204ENST00000486995 IL27Q8NEV9 243 aa15.47■□□□□ 0.07
PTCD2-204ENST00000486995 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
PTCD2-204ENST00000486995 RBM25P49756 843 aaKnown RBP15.46■□□□□ 0.07
PTCD2-204ENST00000486995 KIF24Q5T7B8 1368 aa15.46■□□□□ 0.07
PTCD2-204ENST00000486995 KRT24Q2M2I5 525 aa15.46■□□□□ 0.06
PTCD2-204ENST00000486995 MCM10Q7L590 875 aa15.46■□□□□ 0.06
PTCD2-204ENST00000486995 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
PTCD2-204ENST00000486995 PEAK1Q9H792 1746 aa15.45■□□□□ 0.06
PTCD2-204ENST00000486995 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
PTCD2-204ENST00000486995 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
PTCD2-204ENST00000486995 EID1Q9Y6B2 187 aa15.43■□□□□ 0.06
PTCD2-204ENST00000486995 NALCNQ8IZF0 1738 aa15.43■□□□□ 0.06
PTCD2-204ENST00000486995 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
PTCD2-204ENST00000486995 RGPD1P0DJD0 1748 aa15.42■□□□□ 0.06
PTCD2-204ENST00000486995 SOX12O15370 315 aa15.42■□□□□ 0.06
PTCD2-204ENST00000486995 RGS12O14924 1447 aa15.42■□□□□ 0.06
PTCD2-204ENST00000486995 HAP1P54257 671 aaPredicted RBP15.42■□□□□ 0.06
PTCD2-204ENST00000486995 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 BRPF3Q9ULD4 1205 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 CRB1P82279 1406 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 TTC21AQ8NDW8 1320 aa15.41■□□□□ 0.06
PTCD2-204ENST00000486995 HSCBQ8IWL3 235 aa15.4■□□□□ 0.06
PTCD2-204ENST00000486995 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
PTCD2-204ENST00000486995 TBC1D9Q6ZT07 1266 aa15.4■□□□□ 0.06
PTCD2-204ENST00000486995 SNX21Q969T3 373 aa15.4■□□□□ 0.06
PTCD2-204ENST00000486995 CHMP5Q9NZZ3 219 aa15.4■□□□□ 0.06
PTCD2-204ENST00000486995 KIF2CQ99661 725 aa15.39■□□□□ 0.05
PTCD2-204ENST00000486995 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms