RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	NUTM2G	Q5VZR2	741 aa		11.93	□□□□□ -0.5
KIFC1-213	ENST00000486695	KCNH5	Q8NCM2	988 aa		11.93	□□□□□ -0.5
KIFC1-213	ENST00000486695	GTF3C3	Q9Y5Q9	886 aa		11.93	□□□□□ -0.5
KIFC1-213	ENST00000486695	NPHP3	Q7Z494	1330 aa		11.92	□□□□□ -0.5
KIFC1-213	ENST00000486695	AMPH	P49418	695 aa		11.92	□□□□□ -0.5
KIFC1-213	ENST00000486695	XPC	Q01831	940 aa	Predicted RBP	11.92	□□□□□ -0.5
KIFC1-213	ENST00000486695	LMOD2	Q6P5Q4	547 aa		11.92	□□□□□ -0.5
KIFC1-213	ENST00000486695	COL16A1	Q07092	1604 aa	Predicted RBP	11.92	□□□□□ -0.5
KIFC1-213	ENST00000486695	MAPK8IP3	Q9UPT6	1336 aa		11.91	□□□□□ -0.5
KIFC1-213	ENST00000486695	FCHSD2	O94868	740 aa		11.91	□□□□□ -0.5
KIFC1-213	ENST00000486695	IL13	P35225	146 aa		11.91	□□□□□ -0.5
KIFC1-213	ENST00000486695	SBNO1	A3KN83	1393 aa		11.91	□□□□□ -0.5
KIFC1-213	ENST00000486695	KIF24	Q5T7B8	1368 aa		11.91	□□□□□ -0.5
KIFC1-213	ENST00000486695	MAP3K19	Q56UN5	1328 aa		11.9	□□□□□ -0.5
KIFC1-213	ENST00000486695	TCP11L2	Q8N4U5	519 aa		11.9	□□□□□ -0.5
KIFC1-213	ENST00000486695	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.9	□□□□□ -0.5
KIFC1-213	ENST00000486695	MARF1	Q9Y4F3	1742 aa	Known RBP	11.9	□□□□□ -0.5
KIFC1-213	ENST00000486695	FLT4	P35916	1363 aa		11.9	□□□□□ -0.5
KIFC1-213	ENST00000486695	SPATA31A6	Q5VVP1	1343 aa		11.89	□□□□□ -0.51
KIFC1-213	ENST00000486695	NEFL	P07196	543 aa		11.89	□□□□□ -0.51
KIFC1-213	ENST00000486695	GOLGA2	Q08379	1002 aa		11.89	□□□□□ -0.51
KIFC1-213	ENST00000486695	EIF4A2	Q14240	407 aa	Known RBP	11.88	□□□□□ -0.51
KIFC1-213	ENST00000486695	HSP90AB2P	Q58FF8	381 aa		11.88	□□□□□ -0.51
KIFC1-213	ENST00000486695	BRINP3	Q76B58	766 aa		11.88	□□□□□ -0.51
KIFC1-213	ENST00000486695	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.88	□□□□□ -0.51
KIFC1-213	ENST00000486695	PEAK1	Q9H792	1746 aa		11.88	□□□□□ -0.51
KIFC1-213	ENST00000486695	LRP6	O75581	1613 aa		11.87	□□□□□ -0.51
KIFC1-213	ENST00000486695	NEUROD2	Q15784	382 aa		11.87	□□□□□ -0.51
KIFC1-213	ENST00000486695	CCDC27	Q2M243	656 aa		11.87	□□□□□ -0.51
KIFC1-213	ENST00000486695	MEX3C	Q5U5Q3	659 aa	Known RBP	11.87	□□□□□ -0.51
KIFC1-213	ENST00000486695	PLEKHF1	Q96S99	279 aa		11.87	□□□□□ -0.51
KIFC1-213	ENST00000486695	ZNF521	Q96K83	1311 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	GC	P02774	474 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	HMOX1	P09601	288 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	HOXC9	P31274	260 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	PRKAR2B	P31323	418 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	ZNF772	Q68DY9	489 aa	Predicted RBP	11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	CDCA7L	Q96GN5	454 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	RSPH6A	Q9H0K4	717 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	RRP7A	Q9Y3A4	280 aa	Known RBP	11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	RTL1	A6NKG5	1358 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	ALS2	Q96Q42	1657 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	LTN1	O94822	1766 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	SLIT3	O75094	1523 aa		11.86	□□□□□ -0.51
KIFC1-213	ENST00000486695	ARHGEF10	O15013	1369 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	ZBTB7C	A1YPR0	619 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	PLEKHG5	O94827	1062 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	TMPO	P42166	694 aa	Known RBP	11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	WDR63	Q8IWG1	891 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	WWC1	Q8IX03	1113 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	IP6K1	Q92551	441 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	DDX17	Q92841	729 aa	Known RBP	11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	TNS3	Q68CZ2	1445 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	USP19	O94966	1318 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	SPATA31A3	Q5VYP0	1347 aa		11.85	□□□□□ -0.51
KIFC1-213	ENST00000486695	PXDN	Q92626	1479 aa		11.84	□□□□□ -0.51
KIFC1-213	ENST00000486695		E9PSI1	815 aa		11.84	□□□□□ -0.51
KIFC1-213	ENST00000486695	SLFN5	Q08AF3	891 aa		11.84	□□□□□ -0.51
KIFC1-213	ENST00000486695	SULT6B1	Q6IMI4	303 aa		11.84	□□□□□ -0.51
KIFC1-213	ENST00000486695	NFAT5	O94916	1531 aa		11.84	□□□□□ -0.51
KIFC1-213	ENST00000486695	RIPK4	P57078	832 aa		11.83	□□□□□ -0.52
KIFC1-213	ENST00000486695	SOS2	Q07890	1332 aa	Predicted RBP	11.83	□□□□□ -0.52
KIFC1-213	ENST00000486695	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	NUTM2E	B1AL46	878 aa	Predicted RBP	11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	NFE2L2	Q16236	605 aa		11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	ARHGEF25	Q86VW2	580 aa		11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	RGPD1	P0DJD0	1748 aa		11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.82	□□□□□ -0.52
KIFC1-213	ENST00000486695	LMOD3	Q0VAK6	560 aa		11.81	□□□□□ -0.52
KIFC1-213	ENST00000486695	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
KIFC1-213	ENST00000486695	LTV1	Q96GA3	475 aa	Predicted RBP	11.81	□□□□□ -0.52
KIFC1-213	ENST00000486695	MYH16	Q9H6N6	1097 aa		11.81	□□□□□ -0.52
KIFC1-213	ENST00000486695	RCAN3	Q9UKA8	241 aa		11.81	□□□□□ -0.52
KIFC1-213	ENST00000486695	NHSL1	Q5SYE7	1610 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	RXRB	P28702	533 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	CALD1	Q05682	793 aa	Known RBP	11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	DUSP27	Q5VZP5	1158 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	TRMT2A	Q8IZ69	625 aa	Known RBP	11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	LRRC59	Q96AG4	307 aa	Known RBP	11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	PHACTR3	Q96KR7	559 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	EYA1	Q99502	592 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	IGSF1	Q8N6C5	1336 aa		11.8	□□□□□ -0.52
KIFC1-213	ENST00000486695	HAP1	P54257	671 aa	Predicted RBP	11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	ZC3H6	P61129	1189 aa	Known RBP	11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	AEBP1	Q8IUX7	1158 aa		11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	TRIM35	Q9UPQ4	493 aa		11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	AFF2	P51816	1311 aa		11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	IL16	Q14005	1332 aa		11.79	□□□□□ -0.52
KIFC1-213	ENST00000486695	CABLES1	Q8TDN4	633 aa		11.78	□□□□□ -0.52
KIFC1-213	ENST00000486695	KDR	P35968	1356 aa		11.78	□□□□□ -0.52
KIFC1-213	ENST00000486695	ANKRD24	Q8TF21	1146 aa		11.77	□□□□□ -0.53
KIFC1-213	ENST00000486695	GAS2L2	Q8NHY3	880 aa		11.76	□□□□□ -0.53
KIFC1-213	ENST00000486695	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.76	□□□□□ -0.53
KIFC1-213	ENST00000486695	CRYBG1	Q9Y4K1	1723 aa		11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	ERICH6B	Q5W0A0	696 aa		11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	QTRT2	Q9H974	415 aa	Known RBP	11.75	□□□□□ -0.53
KIFC1-213	ENST00000486695	DLG5	Q8TDM6	1919 aa		11.75	□□□□□ -0.53

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