RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 DCCP43146 1447 aa15.46■□□□□ 0.07
PKP4-213ENST00000486254 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
PKP4-213ENST00000486254 MS4A1P11836 297 aa15.46■□□□□ 0.07
PKP4-213ENST00000486254 C20orf194Q5TEA3 1177 aa15.46■□□□□ 0.07
PKP4-213ENST00000486254 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
PKP4-213ENST00000486254 MST1RQ04912 1400 aa15.46■□□□□ 0.06
PKP4-213ENST00000486254 BCAR3O75815 825 aa15.45■□□□□ 0.06
PKP4-213ENST00000486254 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
PKP4-213ENST00000486254 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
PKP4-213ENST00000486254 FBLN1P23142 703 aa15.45■□□□□ 0.06
PKP4-213ENST00000486254 BRPF1P55201 1214 aaPredicted RBP15.45■□□□□ 0.06
PKP4-213ENST00000486254 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
PKP4-213ENST00000486254 MAP3K19Q56UN5 1328 aa15.44■□□□□ 0.06
PKP4-213ENST00000486254 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
PKP4-213ENST00000486254 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
PKP4-213ENST00000486254 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
PKP4-213ENST00000486254 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
PKP4-213ENST00000486254 ALDH1L2Q3SY69 923 aa15.43■□□□□ 0.06
PKP4-213ENST00000486254 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
PKP4-213ENST00000486254 GNAI1P63096 354 aa15.42■□□□□ 0.06
PKP4-213ENST00000486254 NFAT5O94916 1531 aa15.42■□□□□ 0.06
PKP4-213ENST00000486254 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
PKP4-213ENST00000486254 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
PKP4-213ENST00000486254 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
PKP4-213ENST00000486254 HMOX1P09601 288 aa15.41■□□□□ 0.06
PKP4-213ENST00000486254 SLIT3O75094 1523 aa15.4■□□□□ 0.06
PKP4-213ENST00000486254 CANXP27824 592 aaKnown RBP15.4■□□□□ 0.06
PKP4-213ENST00000486254 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
PKP4-213ENST00000486254 NLRP6P59044 892 aa15.39■□□□□ 0.05
PKP4-213ENST00000486254 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
PKP4-213ENST00000486254 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
PKP4-213ENST00000486254 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
PKP4-213ENST00000486254 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
PKP4-213ENST00000486254 CLUAP1Q96AJ1 413 aa15.38■□□□□ 0.05
PKP4-213ENST00000486254 LTN1O94822 1766 aa15.38■□□□□ 0.05
PKP4-213ENST00000486254 HAP1P54257 671 aaPredicted RBP15.37■□□□□ 0.05
PKP4-213ENST00000486254 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
PKP4-213ENST00000486254 LRRC37A3O60309 1634 aa15.37■□□□□ 0.05
PKP4-213ENST00000486254 SULT6B1Q6IMI4 303 aa15.36■□□□□ 0.05
PKP4-213ENST00000486254 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
PKP4-213ENST00000486254 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
PKP4-213ENST00000486254 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
PKP4-213ENST00000486254 KCNH5Q8NCM2 988 aa15.36■□□□□ 0.05
PKP4-213ENST00000486254 C19orf44Q9H6X5 657 aa15.36■□□□□ 0.05
PKP4-213ENST00000486254 KIAA0232Q92628 1395 aa15.35■□□□□ 0.05
PKP4-213ENST00000486254 AMPHP49418 695 aa15.35■□□□□ 0.05
PKP4-213ENST00000486254 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
PKP4-213ENST00000486254 SMC4Q9NTJ3 1288 aa15.35■□□□□ 0.05
PKP4-213ENST00000486254 HTATSF1O43719 755 aaKnown RBP15.34■□□□□ 0.05
PKP4-213ENST00000486254 HOXC9P31274 260 aa15.34■□□□□ 0.05
PKP4-213ENST00000486254 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
PKP4-213ENST00000486254 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
PKP4-213ENST00000486254 USP19O94966 1318 aa15.34■□□□□ 0.05
PKP4-213ENST00000486254 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 NCAPD2Q15021 1401 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 ATF7IPQ6VMQ6 1270 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 DZIP1LQ8IYY4 767 aaKnown RBP15.33■□□□□ 0.05
PKP4-213ENST00000486254 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 PANK1Q8TE04 598 aa15.33■□□□□ 0.05
PKP4-213ENST00000486254 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
PKP4-213ENST00000486254 CAMTA1Q9Y6Y1 1673 aa15.33■□□□□ 0.04
PKP4-213ENST00000486254 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
PKP4-213ENST00000486254 ABCC6O95255 1503 aa15.32■□□□□ 0.04
PKP4-213ENST00000486254 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
PKP4-213ENST00000486254 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
PKP4-213ENST00000486254 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
PKP4-213ENST00000486254 MBIPQ9NS73 344 aa15.32■□□□□ 0.04
PKP4-213ENST00000486254 COG6Q9Y2V7 657 aa15.32■□□□□ 0.04
PKP4-213ENST00000486254 VAMP4O75379 141 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 RLBP1P12271 317 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 TRIM27P14373 513 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 PSME1Q06323 249 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 IP6K1Q92551 441 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 EYA1Q99502 592 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
PKP4-213ENST00000486254 DDX19BQ9UMR2 479 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 PLEKHG2Q9H7P9 1386 aa15.31■□□□□ 0.04
PKP4-213ENST00000486254 CRB1P82279 1406 aa15.3■□□□□ 0.04
PKP4-213ENST00000486254 CHL1O00533 1208 aa15.3■□□□□ 0.04
PKP4-213ENST00000486254 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
PKP4-213ENST00000486254 FTSJ3Q8IY81 847 aaKnown RBP15.3■□□□□ 0.04
PKP4-213ENST00000486254 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
PKP4-213ENST00000486254 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
PKP4-213ENST00000486254 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
PKP4-213ENST00000486254 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
PKP4-213ENST00000486254 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
PKP4-213ENST00000486254 MED1Q15648 1581 aaPredicted RBP15.27■□□□□ 0.03
PKP4-213ENST00000486254 TWISTNBQ3B726 338 aaPredicted RBP15.27■□□□□ 0.03
PKP4-213ENST00000486254 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.03
PKP4-213ENST00000486254 CADPS2Q86UW7 1296 aa15.26■□□□□ 0.03
PKP4-213ENST00000486254 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
PKP4-213ENST00000486254 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
PKP4-213ENST00000486254 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 OVOS2A0A0G2JMS6 1433 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 STRCQ7RTU9 1775 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 ORAI2Q96SN7 254 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 BACH2Q9BYV9 841 aa15.25■□□□□ 0.03
PKP4-213ENST00000486254 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms