RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CHMP4BQ9H444 224 aaKnown RBP28.17■■■□□ 2.1
CLN5-202ENST00000485938 ANKRD45Q5TZF3 282 aa28.17■■■□□ 2.1
CLN5-202ENST00000485938 FBLN1P23142 703 aa28.16■■■□□ 2.1
CLN5-202ENST00000485938 KIF2CQ99661 725 aa28.16■■■□□ 2.1
CLN5-202ENST00000485938 CIZ1Q9ULV3 898 aaPredicted RBP28.15■■■□□ 2.1
CLN5-202ENST00000485938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.15■■■□□ 2.1
CLN5-202ENST00000485938 THUMPD2Q9BTF0 503 aaKnown RBP28.14■■■□□ 2.1
CLN5-202ENST00000485938 ATP7BP35670 1465 aa28.14■■■□□ 2.1
CLN5-202ENST00000485938 CALD1Q05682 793 aaKnown RBP28.14■■■□□ 2.09
CLN5-202ENST00000485938 TSPYL6Q8N831 410 aa28.14■■■□□ 2.09
CLN5-202ENST00000485938 C1orf115Q9H7X2 142 aa28.14■■■□□ 2.09
CLN5-202ENST00000485938 MRE11P49959 708 aa28.13■■■□□ 2.09
CLN5-202ENST00000485938 EIF5BO60841 1220 aaKnown RBP28.13■■■□□ 2.09
CLN5-202ENST00000485938 MAP2P11137 1827 aaKnown RBP28.12■■■□□ 2.09
CLN5-202ENST00000485938 HSP90AB1P08238 724 aaKnown RBP28.12■■■□□ 2.09
CLN5-202ENST00000485938 HMOX1P09601 288 aa28.12■■■□□ 2.09
CLN5-202ENST00000485938 TNPO1Q92973 898 aaKnown RBP28.12■■■□□ 2.09
CLN5-202ENST00000485938 IFT57Q9NWB7 429 aa28.12■■■□□ 2.09
CLN5-202ENST00000485938 ABCC4O15439 1325 aa28.12■■■□□ 2.09
CLN5-202ENST00000485938 SIRT2Q8IXJ6 389 aa28.12■■■□□ 2.09
CLN5-202ENST00000485938 ZNF853P0CG23 659 aa28.11■■■□□ 2.09
CLN5-202ENST00000485938 GNAI1P63096 354 aa28.11■■■□□ 2.09
CLN5-202ENST00000485938 TBC1D9Q6ZT07 1266 aa28.1■■■□□ 2.09
CLN5-202ENST00000485938 RAB3GAP1Q15042 981 aa28.09■■■□□ 2.09
CLN5-202ENST00000485938 FBXO31Q5XUX0 539 aaPredicted RBP28.09■■■□□ 2.09
CLN5-202ENST00000485938 MBIPQ9NS73 344 aa28.09■■■□□ 2.09
CLN5-202ENST00000485938 ISY1Q9ULR0 285 aaKnown RBP28.08■■■□□ 2.09
CLN5-202ENST00000485938 DLC1Q96QB1 1528 aa28.08■■■□□ 2.09
CLN5-202ENST00000485938 IL13P35225 146 aa28.07■■■□□ 2.08
CLN5-202ENST00000485938 REREQ9P2R6 1566 aa28.07■■■□□ 2.08
CLN5-202ENST00000485938 CD2BP2O95400 341 aaKnown RBP28.07■■■□□ 2.08
CLN5-202ENST00000485938 GRPEL1Q9HAV7 217 aa28.06■■■□□ 2.08
CLN5-202ENST00000485938 EMILIN1Q9Y6C2 1016 aa28.06■■■□□ 2.08
CLN5-202ENST00000485938 GBP4Q96PP9 640 aa28.06■■■□□ 2.08
CLN5-202ENST00000485938 ELL2O00472 640 aaPredicted RBP28.05■■■□□ 2.08
CLN5-202ENST00000485938 CDK12Q9NYV4 1490 aaPredicted RBP28.04■■■□□ 2.08
CLN5-202ENST00000485938 TWISTNBQ3B726 338 aaPredicted RBP28.04■■■□□ 2.08
CLN5-202ENST00000485938 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
CLN5-202ENST00000485938 K7ELQ4 463 aaPredicted RBP28.03■■■□□ 2.08
CLN5-202ENST00000485938 CFAP44Q96MT7 982 aa28.02■■■□□ 2.08
CLN5-202ENST00000485938 CPSF1Q10570 1443 aaKnown RBP28.02■■■□□ 2.08
CLN5-202ENST00000485938 EDC4Q6P2E9 1401 aaKnown RBP28.01■■■□□ 2.07
CLN5-202ENST00000485938 C8orf58Q8NAV2 365 aa28.01■■■□□ 2.07
CLN5-202ENST00000485938 DLG5Q8TDM6 1919 aa28.01■■■□□ 2.07
CLN5-202ENST00000485938 API5Q9BZZ5 524 aaKnown RBP28.01■■■□□ 2.07
CLN5-202ENST00000485938 CDC45O75419 566 aa28■■■□□ 2.07
CLN5-202ENST00000485938 CLCN1P35523 988 aa28■■■□□ 2.07
CLN5-202ENST00000485938 RBM42Q9BTD8 480 aaKnown RBP28■■■□□ 2.07
CLN5-202ENST00000485938 STAG3Q9UJ98 1225 aa28■■■□□ 2.07
CLN5-202ENST00000485938 HSP90AA1P07900 732 aaKnown RBP27.99■■■□□ 2.07
CLN5-202ENST00000485938 LMOD3Q0VAK6 560 aa27.99■■■□□ 2.07
CLN5-202ENST00000485938 SKOR2Q2VWA4 1001 aaPredicted RBP27.99■■■□□ 2.07
CLN5-202ENST00000485938 AATKQ6ZMQ8 1374 aa27.99■■■□□ 2.07
CLN5-202ENST00000485938 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
CLN5-202ENST00000485938 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
CLN5-202ENST00000485938 PTMSP20962 102 aa27.98■■■□□ 2.07
CLN5-202ENST00000485938 NME9Q86XW9 330 aa27.98■■■□□ 2.07
CLN5-202ENST00000485938 KIF24Q5T7B8 1368 aa27.98■■■□□ 2.07
CLN5-202ENST00000485938 FOXD4L1Q9NU39 408 aa27.97■■■□□ 2.07
CLN5-202ENST00000485938 RIMS2Q9UQ26 1411 aa27.97■■■□□ 2.07
CLN5-202ENST00000485938 GSPT1P15170 499 aaKnown RBP27.96■■■□□ 2.07
CLN5-202ENST00000485938 ZRANB1Q9UGI0 708 aa27.96■■■□□ 2.07
CLN5-202ENST00000485938 GAS2L3Q86XJ1 694 aa27.95■■■□□ 2.07
CLN5-202ENST00000485938 PLEKHM2Q8IWE5 1019 aa27.95■■■□□ 2.07
CLN5-202ENST00000485938 GAS2L2Q8NHY3 880 aa27.95■■■□□ 2.07
CLN5-202ENST00000485938 DCTPP1Q9H773 170 aa27.93■■■□□ 2.06
CLN5-202ENST00000485938 A2ML1A8K2U0 1454 aa27.93■■■□□ 2.06
CLN5-202ENST00000485938 FAM83GA6ND36 823 aa27.93■■■□□ 2.06
CLN5-202ENST00000485938 WASLO00401 505 aaPredicted RBP27.92■■■□□ 2.06
CLN5-202ENST00000485938 CLEC17AQ6ZS10 378 aa27.92■■■□□ 2.06
CLN5-202ENST00000485938 SSFA2P28290 1259 aa27.91■■■□□ 2.06
CLN5-202ENST00000485938 KIF13AQ9H1H9 1805 aa27.9■■■□□ 2.06
CLN5-202ENST00000485938 INTS3Q68E01 1043 aaKnown RBP27.9■■■□□ 2.06
CLN5-202ENST00000485938 TTC22Q5TAA0 569 aa27.89■■■□□ 2.06
CLN5-202ENST00000485938 CPS1P31327 1500 aa27.89■■■□□ 2.06
CLN5-202ENST00000485938 DCTN1Q14203 1278 aa27.89■■■□□ 2.05
CLN5-202ENST00000485938 RRS1Q15050 365 aaKnown RBP27.89■■■□□ 2.05
CLN5-202ENST00000485938 COG3Q96JB2 828 aa27.89■■■□□ 2.05
CLN5-202ENST00000485938 RABEP1Q15276 862 aa27.87■■■□□ 2.05
CLN5-202ENST00000485938 MON2Q7Z3U7 1717 aa27.87■■■□□ 2.05
CLN5-202ENST00000485938 ATP10DQ9P241 1426 aa27.87■■■□□ 2.05
CLN5-202ENST00000485938 MLECQ14165 292 aa27.87■■■□□ 2.05
CLN5-202ENST00000485938 ANKRD44Q8N8A2 993 aa27.86■■■□□ 2.05
CLN5-202ENST00000485938 RGS12O14924 1447 aa27.85■■■□□ 2.05
CLN5-202ENST00000485938 ESPNB1AK53 854 aa27.85■■■□□ 2.05
CLN5-202ENST00000485938 C16orf71Q8IYS4 520 aaPredicted RBP27.84■■■□□ 2.05
CLN5-202ENST00000485938 NUDT16Q96DE0 195 aaKnown RBP27.84■■■□□ 2.05
CLN5-202ENST00000485938 ERBB4Q15303 1308 aa27.84■■■□□ 2.05
CLN5-202ENST00000485938 GOLGA6L22H0YM25 854 aa27.84■■■□□ 2.05
CLN5-202ENST00000485938 USP26Q9BXU7 913 aa27.84■■■□□ 2.05
CLN5-202ENST00000485938 BAG4O95429 457 aaKnown RBP27.83■■■□□ 2.05
CLN5-202ENST00000485938 SPATA31D1Q6ZQQ2 1576 aa27.83■■■□□ 2.05
CLN5-202ENST00000485938 NRXN3Q9Y4C0 1643 aa27.83■■■□□ 2.05
CLN5-202ENST00000485938 C3P01024 1663 aa27.82■■■□□ 2.04
CLN5-202ENST00000485938 NCKAP5LQ9HCH0 1330 aa27.82■■■□□ 2.04
CLN5-202ENST00000485938 NRKQ7Z2Y5 1582 aa27.82■■■□□ 2.04
CLN5-202ENST00000485938 RPAP2Q8IXW5 612 aaPredicted RBP27.81■■■□□ 2.04
CLN5-202ENST00000485938 NAP1L5Q96NT1 182 aaPredicted RBP27.81■■■□□ 2.04
CLN5-202ENST00000485938 KLHL40Q2TBA0 621 aa27.81■■■□□ 2.04
CLN5-202ENST00000485938 CEP85Q6P2H3 762 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms