RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SLC6A16Q9GZN6 736 aa6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 FAM217BQ9NTX9 383 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 SLC27A5Q9Y2P5 690 aa6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 PDS5BQ9NTI5 1447 aa6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 RAPGEF6Q8TEU7 1601 aa6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 FMNL1O95466 1100 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 ANP32AP39687 249 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 FAM9BQ8IZU0 186 aa6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 AK7Q96M32 723 aa6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 IPO9Q96P70 1041 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 BRD4O60885 1362 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-206ENST00000485737 CAMSAP2Q08AD1 1489 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 CEP170Q5SW79 1584 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 SSTR3P32745 418 aaPredicted RBP6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 AMHR2Q16671 573 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 GIGYF2Q6Y7W6 1299 aaKnown RBP6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 SLC24A3Q9HC58 644 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 DISP1Q96F81 1524 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 KIF15Q9NS87 1388 aa6.28□□□□□ -1.4
SMARCC1-206ENST00000485737 TROQ12816 1431 aaPredicted RBP6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 KIAA0586Q9BVV6 1533 aa6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 TRIM66O15016 1216 aa6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 PNISRQ8TF01 805 aaKnown RBP6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 HLA-CQ95604 372 aa6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 LAMC1P11047 1609 aa6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 PLEKHH2Q8IVE3 1493 aa6.27□□□□□ -1.41
SMARCC1-206ENST00000485737 PTPRGP23470 1445 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 MS4A1P11836 297 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 USP46P62068 366 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 GUCA2AQ02747 115 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 Q3C1V9 767 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 RNF19BQ6ZMZ0 732 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 CCDC136Q96JN2 1154 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 CHIC2Q9UKJ5 165 aa6.26□□□□□ -1.41
SMARCC1-206ENST00000485737 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 HOXA2O43364 376 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 RRP1P56182 461 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 RTL5Q5HYW3 569 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 ZNF787Q6DD87 383 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 PARP9Q8IXQ6 854 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 ANKLE1Q8NAG6 615 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 THAP11Q96EK4 314 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 PRDM9Q9NQV7 894 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 USP35Q9P2H5 1018 aa6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 MYBBP1AQ9BQG0 1328 aaKnown RBP6.25□□□□□ -1.41
SMARCC1-206ENST00000485737 PARD3Q8TEW0 1356 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 SLC19A1P41440 591 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 PDE3BQ13370 1112 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 RALBP1Q15311 655 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 BRICD5Q6PL45 260 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 BEGAINQ9BUH8 593 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 CDC42BPAQ5VT25 1732 aa6.24□□□□□ -1.41
SMARCC1-206ENST00000485737 EIF4G3O43432 1585 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 ARHGEF5Q12774 1597 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 MRC2Q9UBG0 1479 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 ANKRD30AQ9BXX3 1397 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 PDE4DQ08499 809 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 FAM160A2Q8N612 972 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 PDZRN3Q9UPQ7 1066 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 FCF1Q9Y324 198 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 SALL2Q9Y467 1007 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 ZNF608Q9ULD9 1512 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 ANKRD50Q9ULJ7 1429 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 WASHC2CQ9Y4E1 1318 aa6.23□□□□□ -1.41
SMARCC1-206ENST00000485737 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 COL17A1Q9UMD9 1497 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 GPRASP1Q5JY77 1395 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 TRPM1Q7Z4N2 1603 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 PLA2G2CQ5R387 149 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 SPIRE2Q8WWL2 714 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 SYMPKQ92797 1274 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 USB1Q9BQ65 265 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 GRIN2AQ12879 1464 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 ABCC10Q5T3U5 1492 aa6.22□□□□□ -1.41
SMARCC1-206ENST00000485737 PRDM15P57071 1507 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 C6orf229H3BNL8 230 aa6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 FDX1P10109 184 aa6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 NDUFV2P19404 249 aa6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 MSS51Q4VC12 460 aa6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 LIAT1Q6ZQX7 453 aa6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 EIF2AK4Q9P2K8 1649 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-206ENST00000485737 CLASP1Q7Z460 1538 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 UNC13BO14795 1591 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 ABCA8O94911 1581 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 C9orf84Q5VXU9 1444 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 PRG4Q92954 1404 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 MOXD2PA6NHM9 499 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 PPM1GO15355 546 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 DGAT1O75907 488 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 TMC1Q8TDI8 760 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 EMID1Q96A84 441 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 BACH2Q9BYV9 841 aa6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 RNF17Q9BXT8 1623 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 ZNF644Q9H582 1327 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-206ENST00000485737 MAST1Q9Y2H9 1570 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms