RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 FAM135AQ9P2D6 1515 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 VWDEQ8N2E2 1590 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 ANKLE2Q86XL3 938 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 RDH13Q8NBN7 331 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 DAXXQ9UER7 740 aaPredicted RBP9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
SEMA3D-204ENST00000484038 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
SEMA3D-204ENST00000484038 UGGT1Q9NYU2 1555 aa9.6□□□□□ -0.87
SEMA3D-204ENST00000484038 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
SEMA3D-204ENST00000484038 IQGAP1P46940 1657 aa9.59□□□□□ -0.87
SEMA3D-204ENST00000484038 DEPDC5O75140 1603 aa9.59□□□□□ -0.87
SEMA3D-204ENST00000484038 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
SEMA3D-204ENST00000484038 NPHP4O75161 1426 aaPredicted RBP9.59□□□□□ -0.87
SEMA3D-204ENST00000484038 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
SEMA3D-204ENST00000484038 MIA2Q96PC5 1412 aa9.58□□□□□ -0.88
SEMA3D-204ENST00000484038 CLCN1P35523 988 aa9.58□□□□□ -0.88
SEMA3D-204ENST00000484038 THEMISQ8N1K5 641 aaPredicted RBP9.58□□□□□ -0.88
SEMA3D-204ENST00000484038 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
SEMA3D-204ENST00000484038 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
SEMA3D-204ENST00000484038 SULF1Q8IWU6 871 aa9.57□□□□□ -0.88
SEMA3D-204ENST00000484038 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
SEMA3D-204ENST00000484038 ALKQ9UM73 1620 aa9.57□□□□□ -0.88
SEMA3D-204ENST00000484038 MED14O60244 1454 aa9.57□□□□□ -0.88
SEMA3D-204ENST00000484038 RNF17Q9BXT8 1623 aaKnown RBP9.56□□□□□ -0.88
SEMA3D-204ENST00000484038 SYNMO15061 1565 aa9.56□□□□□ -0.88
SEMA3D-204ENST00000484038 ZC3H13Q5T200 1668 aaKnown RBP9.56□□□□□ -0.88
SEMA3D-204ENST00000484038 TRIM66O15016 1216 aa9.56□□□□□ -0.88
SEMA3D-204ENST00000484038 CFHP08603 1231 aa9.56□□□□□ -0.88
SEMA3D-204ENST00000484038 STRCP1A6NGW2 1772 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 ARHGEF5Q12774 1597 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 ABCC3O15438 1527 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
SEMA3D-204ENST00000484038 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
SEMA3D-204ENST00000484038 SLC10A3P09131 477 aa9.54□□□□□ -0.88
SEMA3D-204ENST00000484038 APLP1P51693 650 aa9.54□□□□□ -0.88
SEMA3D-204ENST00000484038 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
SEMA3D-204ENST00000484038 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
SEMA3D-204ENST00000484038 AMHR2Q16671 573 aa9.53□□□□□ -0.88
SEMA3D-204ENST00000484038 CEP152O94986 1710 aa9.53□□□□□ -0.88
SEMA3D-204ENST00000484038 EIF2AK4Q9P2K8 1649 aaKnown RBP9.52□□□□□ -0.89
SEMA3D-204ENST00000484038 UBR1Q8IWV7 1749 aa9.52□□□□□ -0.89
SEMA3D-204ENST00000484038 SCAF11Q99590 1463 aaKnown RBP9.51□□□□□ -0.89
SEMA3D-204ENST00000484038 MAST1Q9Y2H9 1570 aa9.51□□□□□ -0.89
SEMA3D-204ENST00000484038 PDE4DQ08499 809 aa9.51□□□□□ -0.89
SEMA3D-204ENST00000484038 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
SEMA3D-204ENST00000484038 MROH1Q8NDA8 1641 aa9.51□□□□□ -0.89
SEMA3D-204ENST00000484038 PARP9Q8IXQ6 854 aa9.5□□□□□ -0.89
SEMA3D-204ENST00000484038 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
SEMA3D-204ENST00000484038 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
SEMA3D-204ENST00000484038 CFAP65Q6ZU64 1925 aaKnown RBP9.49□□□□□ -0.89
SEMA3D-204ENST00000484038 COPS2P61201 443 aa9.49□□□□□ -0.89
SEMA3D-204ENST00000484038 FAM217BQ9NTX9 383 aaPredicted RBP9.49□□□□□ -0.89
SEMA3D-204ENST00000484038 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
SEMA3D-204ENST00000484038 LRRC9Q6ZRR7 1453 aa9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 XIRP1Q702N8 1843 aaKnown RBP9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 CD46P15529 392 aa9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 SSTR3P32745 418 aaPredicted RBP9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 SLIT1O75093 1534 aa9.47□□□□□ -0.89
SEMA3D-204ENST00000484038 DUOX2Q9NRD8 1548 aa9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 LTKP29376 864 aa9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 GCGRP47871 477 aa9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 MTRQ99707 1265 aa9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.89
SEMA3D-204ENST00000484038 ARHGAP23Q9P227 1491 aa9.46□□□□□ -0.9
SEMA3D-204ENST00000484038 PRDM15P57071 1507 aaPredicted RBP9.46□□□□□ -0.9
SEMA3D-204ENST00000484038 EID1Q9Y6B2 187 aa9.46□□□□□ -0.9
SEMA3D-204ENST00000484038 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
SEMA3D-204ENST00000484038 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
SEMA3D-204ENST00000484038 FUT2Q10981 343 aa9.45□□□□□ -0.9
SEMA3D-204ENST00000484038 RGS17Q9UGC6 210 aaPredicted RBP9.45□□□□□ -0.9
SEMA3D-204ENST00000484038 KIF15Q9NS87 1388 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 VPS8Q8N3P4 1428 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 KCNC4Q03721 635 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 PUS10Q3MIT2 529 aaKnown RBP9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 BLOC1S3Q6QNY0 202 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 IL21Q9HBE4 155 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 CROCC2H7BZ55 1655 aa9.44□□□□□ -0.9
SEMA3D-204ENST00000484038 ARHGAP31Q2M1Z3 1444 aa9.43□□□□□ -0.9
SEMA3D-204ENST00000484038 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
SEMA3D-204ENST00000484038 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
SEMA3D-204ENST00000484038 ERBINQ96RT1 1412 aa9.43□□□□□ -0.9
SEMA3D-204ENST00000484038 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 KDM4AO75164 1064 aa9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 RRP7BPQ9NSQ0 103 aa9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 TMEM94Q12767 1356 aa9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 FAM135BQ49AJ0 1406 aa9.42□□□□□ -0.9
SEMA3D-204ENST00000484038 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 MS4A1P11836 297 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms