RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
C9orf3-218ENST00000482056 VAMP4O75379 141 aa19.32■□□□□ 0.68
C9orf3-218ENST00000482056 NME9Q86XW9 330 aa19.32■□□□□ 0.68
C9orf3-218ENST00000482056 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
C9orf3-218ENST00000482056 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
C9orf3-218ENST00000482056 NUDT16Q96DE0 195 aaKnown RBP19.32■□□□□ 0.68
C9orf3-218ENST00000482056 PHACTR3Q96KR7 559 aa19.32■□□□□ 0.68
C9orf3-218ENST00000482056 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
C9orf3-218ENST00000482056 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
C9orf3-218ENST00000482056 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
C9orf3-218ENST00000482056 FBLN1P23142 703 aa19.3■□□□□ 0.68
C9orf3-218ENST00000482056 CCDC61Q9Y6R9 512 aa19.3■□□□□ 0.68
C9orf3-218ENST00000482056 AKAP12Q02952 1782 aa19.3■□□□□ 0.68
C9orf3-218ENST00000482056 TECPR2O15040 1411 aa19.3■□□□□ 0.68
C9orf3-218ENST00000482056 MLECQ14165 292 aa19.3■□□□□ 0.68
C9orf3-218ENST00000482056 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
C9orf3-218ENST00000482056 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
C9orf3-218ENST00000482056 METP08581 1390 aa19.29■□□□□ 0.68
C9orf3-218ENST00000482056 CPS1P31327 1500 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 DLG5Q8TDM6 1919 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-218ENST00000482056 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 HSCBQ8IWL3 235 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
C9orf3-218ENST00000482056 C3P01024 1663 aa19.27■□□□□ 0.68
C9orf3-218ENST00000482056 API5Q9BZZ5 524 aaKnown RBP19.27■□□□□ 0.68
C9orf3-218ENST00000482056 LNPKQ9C0E8 428 aa19.27■□□□□ 0.68
C9orf3-218ENST00000482056 TWISTNBQ3B726 338 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-218ENST00000482056 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
C9orf3-218ENST00000482056 ABCC4O15439 1325 aa19.26■□□□□ 0.67
C9orf3-218ENST00000482056 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-218ENST00000482056 BMP2KLQ5H9B9 411 aa19.26■□□□□ 0.67
C9orf3-218ENST00000482056 CHMP5Q9NZZ3 219 aa19.25■□□□□ 0.67
C9orf3-218ENST00000482056 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
C9orf3-218ENST00000482056 KIF24Q5T7B8 1368 aa19.24■□□□□ 0.67
C9orf3-218ENST00000482056 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
C9orf3-218ENST00000482056 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
C9orf3-218ENST00000482056 EIF5BO60841 1220 aaKnown RBP19.23■□□□□ 0.67
C9orf3-218ENST00000482056 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
C9orf3-218ENST00000482056 ANKRD45Q5TZF3 282 aa19.23■□□□□ 0.67
C9orf3-218ENST00000482056 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
C9orf3-218ENST00000482056 RRS1Q15050 365 aaKnown RBP19.22■□□□□ 0.67
C9orf3-218ENST00000482056 ELL2O00472 640 aaPredicted RBP19.21■□□□□ 0.67
C9orf3-218ENST00000482056 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
C9orf3-218ENST00000482056 TNRQ92752 1358 aa19.21■□□□□ 0.67
C9orf3-218ENST00000482056 SNX21Q969T3 373 aa19.2■□□□□ 0.66
C9orf3-218ENST00000482056 C8orf58Q8NAV2 365 aa19.19■□□□□ 0.66
C9orf3-218ENST00000482056 SPRYD3Q8NCJ5 442 aa19.19■□□□□ 0.66
C9orf3-218ENST00000482056 MCM4P33991 863 aa19.18■□□□□ 0.66
C9orf3-218ENST00000482056 C1orf115Q9H7X2 142 aa19.18■□□□□ 0.66
C9orf3-218ENST00000482056 RTN4Q9NQC3 1192 aaKnown RBP19.18■□□□□ 0.66
C9orf3-218ENST00000482056 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
C9orf3-218ENST00000482056 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
C9orf3-218ENST00000482056 NCKAP5LQ9HCH0 1330 aa19.17■□□□□ 0.66
C9orf3-218ENST00000482056 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
C9orf3-218ENST00000482056 PRR36Q9H6K5 1346 aa19.16■□□□□ 0.66
C9orf3-218ENST00000482056 TOPAZ1Q8N9V7 1692 aa19.15■□□□□ 0.66
C9orf3-218ENST00000482056 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
C9orf3-218ENST00000482056 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
C9orf3-218ENST00000482056 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
C9orf3-218ENST00000482056 SULT6B1Q6IMI4 303 aa19.14■□□□□ 0.65
C9orf3-218ENST00000482056 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.65
C9orf3-218ENST00000482056 ROBO2Q9HCK4 1378 aa19.14■□□□□ 0.65
C9orf3-218ENST00000482056 DDX11L8A8MPP1 907 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
C9orf3-218ENST00000482056 INTS3Q68E01 1043 aaKnown RBP19.13■□□□□ 0.65
C9orf3-218ENST00000482056 KIAA0232Q92628 1395 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 OVOS2A0A0J9YW53 1432 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 OVOS2Q6IE36 1432 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 PLEKHG3A1L390 1219 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 DCTN1Q14203 1278 aa19.13■□□□□ 0.65
C9orf3-218ENST00000482056 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-218ENST00000482056 CDC45O75419 566 aa19.12■□□□□ 0.65
C9orf3-218ENST00000482056 ACEP12821 1306 aa19.12■□□□□ 0.65
C9orf3-218ENST00000482056 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
C9orf3-218ENST00000482056 TBC1D9Q6ZT07 1266 aa19.12■□□□□ 0.65
C9orf3-218ENST00000482056 PLEKHG1Q9ULL1 1385 aa19.11■□□□□ 0.65
C9orf3-218ENST00000482056 CHL1O00533 1208 aa19.11■□□□□ 0.65
C9orf3-218ENST00000482056 PTPRCP08575 1304 aa19.11■□□□□ 0.65
C9orf3-218ENST00000482056 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
C9orf3-218ENST00000482056 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-218ENST00000482056 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
C9orf3-218ENST00000482056 USP6P35125 1406 aa19.1■□□□□ 0.65
C9orf3-218ENST00000482056 AEBP1Q8IUX7 1158 aa19.1■□□□□ 0.65
C9orf3-218ENST00000482056 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-218ENST00000482056 KIF13AQ9H1H9 1805 aa19.09■□□□□ 0.65
C9orf3-218ENST00000482056 RGPD1P0DJD0 1748 aa19.09■□□□□ 0.65
C9orf3-218ENST00000482056 USP31Q70CQ4 1352 aa19.08■□□□□ 0.65
C9orf3-218ENST00000482056 GOLGA6L3A6NEY3 463 aa19.08■□□□□ 0.65
C9orf3-218ENST00000482056 PTMSP20962 102 aa19.08■□□□□ 0.65
C9orf3-218ENST00000482056 TRAK2O60296 914 aa19.08■□□□□ 0.64
C9orf3-218ENST00000482056 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.64
C9orf3-218ENST00000482056 DDIT3P35638 169 aa19.08■□□□□ 0.64
C9orf3-218ENST00000482056 ANKRD44Q8N8A2 993 aa19.08■□□□□ 0.64
C9orf3-218ENST00000482056 ARHGEF10O15013 1369 aa19.07■□□□□ 0.64
C9orf3-218ENST00000482056 TTC21AQ8NDW8 1320 aa19.07■□□□□ 0.64
C9orf3-218ENST00000482056 FAM43AQ8N2R8 423 aa19.07■□□□□ 0.64
C9orf3-218ENST00000482056 GBP4Q96PP9 640 aa19.06■□□□□ 0.64
C9orf3-218ENST00000482056 PEAK1Q9H792 1746 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 667 ms