RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
CHD3-211ENST00000481999 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
CHD3-211ENST00000481999 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
CHD3-211ENST00000481999 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
CHD3-211ENST00000481999 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
CHD3-211ENST00000481999 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
CHD3-211ENST00000481999 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
CHD3-211ENST00000481999 RLBP1P12271 317 aa18.68■□□□□ 0.58
CHD3-211ENST00000481999 XPCQ01831 940 aaPredicted RBP18.68■□□□□ 0.58
CHD3-211ENST00000481999 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
CHD3-211ENST00000481999 NLRP6P59044 892 aa18.67■□□□□ 0.58
CHD3-211ENST00000481999 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
CHD3-211ENST00000481999 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
CHD3-211ENST00000481999 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
CHD3-211ENST00000481999 MS4A1P11836 297 aa18.67■□□□□ 0.58
CHD3-211ENST00000481999 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
CHD3-211ENST00000481999 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
CHD3-211ENST00000481999 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
CHD3-211ENST00000481999 FMN2Q9NZ56 1722 aa18.65■□□□□ 0.58
CHD3-211ENST00000481999 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
CHD3-211ENST00000481999 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
CHD3-211ENST00000481999 ORAI2Q96SN7 254 aa18.64■□□□□ 0.57
CHD3-211ENST00000481999 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
CHD3-211ENST00000481999 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
CHD3-211ENST00000481999 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
CHD3-211ENST00000481999 NEFMP07197 916 aa18.62■□□□□ 0.57
CHD3-211ENST00000481999 TTC21AQ8NDW8 1320 aa18.61■□□□□ 0.57
CHD3-211ENST00000481999 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
CHD3-211ENST00000481999 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
CHD3-211ENST00000481999 PDE4AP27815 886 aa18.61■□□□□ 0.57
CHD3-211ENST00000481999 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
CHD3-211ENST00000481999 FOXO3O43524 673 aa18.6■□□□□ 0.57
CHD3-211ENST00000481999 ANKARQ7Z5J8 1434 aa18.6■□□□□ 0.57
CHD3-211ENST00000481999 AMPHP49418 695 aa18.6■□□□□ 0.57
CHD3-211ENST00000481999 TSPYL6Q8N831 410 aa18.6■□□□□ 0.57
CHD3-211ENST00000481999 LTV1Q96GA3 475 aaPredicted RBP18.6■□□□□ 0.57
CHD3-211ENST00000481999 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
CHD3-211ENST00000481999 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
CHD3-211ENST00000481999 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
CHD3-211ENST00000481999 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
CHD3-211ENST00000481999 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.57
CHD3-211ENST00000481999 BACH2Q9BYV9 841 aa18.58■□□□□ 0.57
CHD3-211ENST00000481999 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
CHD3-211ENST00000481999 MCM10Q7L590 875 aa18.58■□□□□ 0.56
CHD3-211ENST00000481999 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.56
CHD3-211ENST00000481999 IGHDP01880 384 aa18.57■□□□□ 0.56
CHD3-211ENST00000481999 PROSER2Q86WR7 435 aaPredicted RBP18.57■□□□□ 0.56
CHD3-211ENST00000481999 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
CHD3-211ENST00000481999 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
CHD3-211ENST00000481999 PSME1Q06323 249 aa18.56■□□□□ 0.56
CHD3-211ENST00000481999 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
CHD3-211ENST00000481999 EYA1Q99502 592 aa18.56■□□□□ 0.56
CHD3-211ENST00000481999 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
CHD3-211ENST00000481999 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
CHD3-211ENST00000481999 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
CHD3-211ENST00000481999 IL16Q14005 1332 aa18.55■□□□□ 0.56
CHD3-211ENST00000481999 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
CHD3-211ENST00000481999 FLT4P35916 1363 aa18.55■□□□□ 0.56
CHD3-211ENST00000481999 TRIM27P14373 513 aa18.54■□□□□ 0.56
CHD3-211ENST00000481999 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
CHD3-211ENST00000481999 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
CHD3-211ENST00000481999 HOXC9P31274 260 aa18.53■□□□□ 0.56
CHD3-211ENST00000481999 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
CHD3-211ENST00000481999 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
CHD3-211ENST00000481999 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.56
CHD3-211ENST00000481999 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.55
CHD3-211ENST00000481999 PCDHB15Q9Y5E8 787 aa18.52■□□□□ 0.55
CHD3-211ENST00000481999 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
CHD3-211ENST00000481999 RGS3P49796 1198 aa18.51■□□□□ 0.55
CHD3-211ENST00000481999 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
CHD3-211ENST00000481999 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
CHD3-211ENST00000481999 FTSJ3Q8IY81 847 aaKnown RBP18.5■□□□□ 0.55
CHD3-211ENST00000481999 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
CHD3-211ENST00000481999 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
CHD3-211ENST00000481999 VAMP4O75379 141 aa18.49■□□□□ 0.55
CHD3-211ENST00000481999 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
CHD3-211ENST00000481999 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
CHD3-211ENST00000481999 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
CHD3-211ENST00000481999 GNAI1P63096 354 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 TMEM94Q12767 1356 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 NBR1Q14596 966 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
CHD3-211ENST00000481999 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
CHD3-211ENST00000481999 TMEM57Q8N5G2 664 aa18.46■□□□□ 0.55
CHD3-211ENST00000481999 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
CHD3-211ENST00000481999 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
CHD3-211ENST00000481999 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
CHD3-211ENST00000481999 LTN1O94822 1766 aa18.45■□□□□ 0.54
CHD3-211ENST00000481999 CT47B1P0C2W7 299 aaPredicted RBP18.45■□□□□ 0.54
CHD3-211ENST00000481999 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
CHD3-211ENST00000481999 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
CHD3-211ENST00000481999 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
CHD3-211ENST00000481999 C19orf44Q9H6X5 657 aa18.44■□□□□ 0.54
CHD3-211ENST00000481999 KDRP35968 1356 aa18.44■□□□□ 0.54
CHD3-211ENST00000481999 NBPF6Q5VWK0 638 aa18.43■□□□□ 0.54
CHD3-211ENST00000481999 NBPF4Q96M43 638 aa18.43■□□□□ 0.54
CHD3-211ENST00000481999 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
CHD3-211ENST00000481999 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms