RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
RERE-213ENST00000480342 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
RERE-213ENST00000480342 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
RERE-213ENST00000480342 FSD2A1L4K1 749 aa12.49□□□□□ -0.41
RERE-213ENST00000480342 TRIM27P14373 513 aa12.49□□□□□ -0.41
RERE-213ENST00000480342 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
RERE-213ENST00000480342 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
RERE-213ENST00000480342 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 AAMPQ13685 434 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 LNPKQ9C0E8 428 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
RERE-213ENST00000480342 LTKP29376 864 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
RERE-213ENST00000480342 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
RERE-213ENST00000480342 SRPK2P78362 688 aaKnown RBP12.46□□□□□ -0.41
RERE-213ENST00000480342 CDK19Q9BWU1 502 aa12.46□□□□□ -0.41
RERE-213ENST00000480342 STK26Q9P289 416 aa12.46□□□□□ -0.41
RERE-213ENST00000480342 ROBO2Q9HCK4 1378 aa12.46□□□□□ -0.42
RERE-213ENST00000480342 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.42
RERE-213ENST00000480342 ANKLE2Q86XL3 938 aa12.46□□□□□ -0.42
RERE-213ENST00000480342 TMEM57Q8N5G2 664 aa12.46□□□□□ -0.42
RERE-213ENST00000480342 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.42
RERE-213ENST00000480342 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
RERE-213ENST00000480342 MRE11P49959 708 aa12.45□□□□□ -0.42
RERE-213ENST00000480342 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
RERE-213ENST00000480342 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
RERE-213ENST00000480342 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
RERE-213ENST00000480342 ATF7IPQ6VMQ6 1270 aa12.44□□□□□ -0.42
RERE-213ENST00000480342 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
RERE-213ENST00000480342 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
RERE-213ENST00000480342 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
RERE-213ENST00000480342 CLCN1P35523 988 aa12.44□□□□□ -0.42
RERE-213ENST00000480342 TNPO1Q92973 898 aaKnown RBP12.44□□□□□ -0.42
RERE-213ENST00000480342 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
RERE-213ENST00000480342 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
RERE-213ENST00000480342 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
RERE-213ENST00000480342 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
RERE-213ENST00000480342 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
RERE-213ENST00000480342 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
RERE-213ENST00000480342 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
RERE-213ENST00000480342 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
RERE-213ENST00000480342 IQSEC2Q5JU85 1478 aa12.42□□□□□ -0.42
RERE-213ENST00000480342 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
RERE-213ENST00000480342 GAS2L3Q86XJ1 694 aa12.42□□□□□ -0.42
RERE-213ENST00000480342 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
RERE-213ENST00000480342 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
RERE-213ENST00000480342 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
RERE-213ENST00000480342 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
RERE-213ENST00000480342 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
RERE-213ENST00000480342 ESPNB1AK53 854 aa12.41□□□□□ -0.42
RERE-213ENST00000480342 RIPK4P57078 832 aa12.41□□□□□ -0.42
RERE-213ENST00000480342 KIF1AQ12756 1690 aa12.41□□□□□ -0.42
RERE-213ENST00000480342 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
RERE-213ENST00000480342 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
RERE-213ENST00000480342 ANKRD45Q5TZF3 282 aa12.4□□□□□ -0.42
RERE-213ENST00000480342 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
RERE-213ENST00000480342 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
RERE-213ENST00000480342 HSP90AA2PQ14568 343 aaPredicted RBP12.4□□□□□ -0.42
RERE-213ENST00000480342 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
RERE-213ENST00000480342 ZBTB40Q9NUA8 1239 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 ADGRL3Q9HAR2 1447 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
RERE-213ENST00000480342 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
RERE-213ENST00000480342 NUCB1Q02818 461 aa12.38□□□□□ -0.43
RERE-213ENST00000480342 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
RERE-213ENST00000480342 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
RERE-213ENST00000480342 WAPLQ7Z5K2 1190 aa12.38□□□□□ -0.43
RERE-213ENST00000480342 GBP4Q96PP9 640 aa12.38□□□□□ -0.43
RERE-213ENST00000480342 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
RERE-213ENST00000480342 USP6P35125 1406 aa12.37□□□□□ -0.43
RERE-213ENST00000480342 DCCP43146 1447 aa12.37□□□□□ -0.43
RERE-213ENST00000480342 FBLN1P23142 703 aa12.37□□□□□ -0.43
RERE-213ENST00000480342 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
RERE-213ENST00000480342 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
RERE-213ENST00000480342 MAP2P11137 1827 aaKnown RBP12.36□□□□□ -0.43
RERE-213ENST00000480342 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
RERE-213ENST00000480342 SSFA2P28290 1259 aa12.36□□□□□ -0.43
RERE-213ENST00000480342 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
RERE-213ENST00000480342 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
RERE-213ENST00000480342 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
RERE-213ENST00000480342 DDIT3P35638 169 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 THUMPD2Q9BTF0 503 aaKnown RBP12.35□□□□□ -0.43
RERE-213ENST00000480342 CABP1Q9NZU7 370 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 PHRF1Q9P1Y6 1649 aaKnown RBP12.35□□□□□ -0.43
RERE-213ENST00000480342 FYB1O15117 783 aa12.35□□□□□ -0.43
RERE-213ENST00000480342 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
RERE-213ENST00000480342 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
RERE-213ENST00000480342 SNX21Q969T3 373 aa12.34□□□□□ -0.43
RERE-213ENST00000480342 KIF2CQ99661 725 aa12.34□□□□□ -0.43
RERE-213ENST00000480342 RGPD8O14715 1765 aaPredicted RBP12.34□□□□□ -0.43
RERE-213ENST00000480342 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
RERE-213ENST00000480342 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
RERE-213ENST00000480342 KCNA6P17658 529 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms