RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 SLIT1O75093 1534 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 ARHGAP23Q9P227 1491 aa11.39□□□□□ -0.59
CDHR3-211ENST00000478080 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
CDHR3-211ENST00000478080 CT47B1P0C2W7 299 aaPredicted RBP11.38□□□□□ -0.59
CDHR3-211ENST00000478080 EIF4A2Q14240 407 aaKnown RBP11.38□□□□□ -0.59
CDHR3-211ENST00000478080 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
CDHR3-211ENST00000478080 HSP90AB2PQ58FF8 381 aa11.38□□□□□ -0.59
CDHR3-211ENST00000478080 TSPYL6Q8N831 410 aa11.38□□□□□ -0.59
CDHR3-211ENST00000478080 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
CDHR3-211ENST00000478080 USP6P35125 1406 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 KCNA6P17658 529 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 ATF7IPQ6VMQ6 1270 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 ITPRIPQ8IWB1 547 aa11.37□□□□□ -0.59
CDHR3-211ENST00000478080 RGPD8O14715 1765 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-211ENST00000478080 NRKQ7Z2Y5 1582 aa11.36□□□□□ -0.59
CDHR3-211ENST00000478080 TMEM57Q8N5G2 664 aa11.36□□□□□ -0.59
CDHR3-211ENST00000478080 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
CDHR3-211ENST00000478080 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
CDHR3-211ENST00000478080 OVOS2A0A0J9YW53 1432 aa11.35□□□□□ -0.59
CDHR3-211ENST00000478080 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
CDHR3-211ENST00000478080 NUTM2GQ5VZR2 741 aa11.35□□□□□ -0.59
CDHR3-211ENST00000478080 DLG5Q8TDM6 1919 aa11.34□□□□□ -0.59
CDHR3-211ENST00000478080 VAMP4O75379 141 aa11.34□□□□□ -0.59
CDHR3-211ENST00000478080 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
CDHR3-211ENST00000478080 PEAK1Q9H792 1746 aa11.34□□□□□ -0.59
CDHR3-211ENST00000478080 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 C8orf58Q8NAV2 365 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 RWDD1Q9H446 243 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-211ENST00000478080 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
CDHR3-211ENST00000478080 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 SEC24BO95487 1268 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 GNAI1P63096 354 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 MCM10Q7L590 875 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 AAMPQ13685 434 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
CDHR3-211ENST00000478080 KRT24Q2M2I5 525 aa11.31□□□□□ -0.6
CDHR3-211ENST00000478080 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
CDHR3-211ENST00000478080 DDX19BQ9UMR2 479 aa11.31□□□□□ -0.6
CDHR3-211ENST00000478080 KIF16BQ96L93 1317 aa11.31□□□□□ -0.6
CDHR3-211ENST00000478080 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
CDHR3-211ENST00000478080 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
CDHR3-211ENST00000478080 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
CDHR3-211ENST00000478080 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
CDHR3-211ENST00000478080 IPO8O15397 1037 aaKnown RBP11.3□□□□□ -0.6
CDHR3-211ENST00000478080 FOXO3O43524 673 aa11.3□□□□□ -0.6
CDHR3-211ENST00000478080 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
CDHR3-211ENST00000478080 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
CDHR3-211ENST00000478080 CEP170BQ9Y4F5 1589 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-211ENST00000478080 NLRP6P59044 892 aa11.3□□□□□ -0.6
CDHR3-211ENST00000478080 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
CDHR3-211ENST00000478080 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
CDHR3-211ENST00000478080 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
CDHR3-211ENST00000478080 LMOD3Q0VAK6 560 aa11.29□□□□□ -0.6
CDHR3-211ENST00000478080 TTC21AQ8NDW8 1320 aa11.29□□□□□ -0.6
CDHR3-211ENST00000478080 AMPHP49418 695 aa11.29□□□□□ -0.6
CDHR3-211ENST00000478080 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
CDHR3-211ENST00000478080 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
CDHR3-211ENST00000478080 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
CDHR3-211ENST00000478080 ANKLE2Q86XL3 938 aa11.27□□□□□ -0.6
CDHR3-211ENST00000478080 EYA1Q99502 592 aa11.27□□□□□ -0.6
CDHR3-211ENST00000478080 PIK3C2AO00443 1686 aa11.27□□□□□ -0.6
CDHR3-211ENST00000478080 USP19O94966 1318 aa11.27□□□□□ -0.61
CDHR3-211ENST00000478080 HDAC1Q13547 482 aaPredicted RBP11.27□□□□□ -0.61
CDHR3-211ENST00000478080 MTHFSDQ2M296 383 aaKnown RBP11.27□□□□□ -0.61
CDHR3-211ENST00000478080 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-211ENST00000478080 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 LTV1Q96GA3 475 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-211ENST00000478080 ZBTB7BO15156 539 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-211ENST00000478080 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 FLT4P35916 1363 aa11.26□□□□□ -0.61
CDHR3-211ENST00000478080 CHL1O00533 1208 aa11.24□□□□□ -0.61
CDHR3-211ENST00000478080 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
CDHR3-211ENST00000478080 FMN2Q9NZ56 1722 aa11.24□□□□□ -0.61
CDHR3-211ENST00000478080 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
CDHR3-211ENST00000478080 HOXC9P31274 260 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 SMC5Q8IY18 1101 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 PHF8Q9UPP1 1060 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 ABCC4O15439 1325 aa11.23□□□□□ -0.61
CDHR3-211ENST00000478080 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 CHD2O14647 1828 aaKnown RBP11.22□□□□□ -0.61
CDHR3-211ENST00000478080 CRB1P82279 1406 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
CDHR3-211ENST00000478080 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms