RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
MINDY3-206ENST00000477891 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
MINDY3-206ENST00000477891 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
MINDY3-206ENST00000477891 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
MINDY3-206ENST00000477891 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
MINDY3-206ENST00000477891 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
MINDY3-206ENST00000477891 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
MINDY3-206ENST00000477891 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
MINDY3-206ENST00000477891 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
MINDY3-206ENST00000477891 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
MINDY3-206ENST00000477891 AEBP1Q8IUX7 1158 aa13.39□□□□□ -0.27
MINDY3-206ENST00000477891 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
MINDY3-206ENST00000477891 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.38□□□□□ -0.27
MINDY3-206ENST00000477891 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
MINDY3-206ENST00000477891 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
MINDY3-206ENST00000477891 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
MINDY3-206ENST00000477891 MON2Q7Z3U7 1717 aa13.38□□□□□ -0.27
MINDY3-206ENST00000477891 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
MINDY3-206ENST00000477891 GNAI1P63096 354 aa13.38□□□□□ -0.27
MINDY3-206ENST00000477891 EIF4A2Q14240 407 aaKnown RBP13.38□□□□□ -0.27
MINDY3-206ENST00000477891 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
MINDY3-206ENST00000477891 C3P01024 1663 aa13.37□□□□□ -0.27
MINDY3-206ENST00000477891 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
MINDY3-206ENST00000477891 C8orf58Q8NAV2 365 aa13.37□□□□□ -0.27
MINDY3-206ENST00000477891 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 CFAP44Q96MT7 982 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 SOX12O15370 315 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
MINDY3-206ENST00000477891 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
MINDY3-206ENST00000477891 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
MINDY3-206ENST00000477891 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
MINDY3-206ENST00000477891 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
MINDY3-206ENST00000477891 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
MINDY3-206ENST00000477891 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
MINDY3-206ENST00000477891 USP6P35125 1406 aa13.34□□□□□ -0.27
MINDY3-206ENST00000477891 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 VIRMAQ69YN4 1812 aaKnown RBP13.33□□□□□ -0.28
MINDY3-206ENST00000477891 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 OVOS2A0A0J9YW53 1432 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 OVOS2Q6IE36 1432 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 LMOD3Q0VAK6 560 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
MINDY3-206ENST00000477891 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
MINDY3-206ENST00000477891 KRT24Q2M2I5 525 aa13.32□□□□□ -0.28
MINDY3-206ENST00000477891 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
MINDY3-206ENST00000477891 MCM10Q7L590 875 aa13.31□□□□□ -0.28
MINDY3-206ENST00000477891 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
MINDY3-206ENST00000477891 TBC1D32Q96NH3 1257 aa13.31□□□□□ -0.28
MINDY3-206ENST00000477891 NUCB1Q02818 461 aa13.3□□□□□ -0.28
MINDY3-206ENST00000477891 LNPKQ9C0E8 428 aa13.3□□□□□ -0.28
MINDY3-206ENST00000477891 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
MINDY3-206ENST00000477891 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
MINDY3-206ENST00000477891 SIRT2Q8IXJ6 389 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
MINDY3-206ENST00000477891 NRKQ7Z2Y5 1582 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 NGDNQ8NEJ9 315 aaKnown RBP13.29□□□□□ -0.28
MINDY3-206ENST00000477891 ABCC4O15439 1325 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 PTCH1Q13635 1447 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
MINDY3-206ENST00000477891 SLIT1O75093 1534 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 CHL1O00533 1208 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
MINDY3-206ENST00000477891 PEAK1Q9H792 1746 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 FOXO3O43524 673 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
MINDY3-206ENST00000477891 KCNA6P17658 529 aa13.27□□□□□ -0.28
MINDY3-206ENST00000477891 MIS18AQ9NYP9 233 aa13.27□□□□□ -0.28
MINDY3-206ENST00000477891 FRAT2O75474 233 aaPredicted RBP13.26□□□□□ -0.29
MINDY3-206ENST00000477891 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
MINDY3-206ENST00000477891 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
MINDY3-206ENST00000477891 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
MINDY3-206ENST00000477891 MTHFSDQ2M296 383 aaKnown RBP13.25□□□□□ -0.29
MINDY3-206ENST00000477891 NUTM2GQ5VZR2 741 aa13.25□□□□□ -0.29
MINDY3-206ENST00000477891 EYA1Q99502 592 aa13.25□□□□□ -0.29
MINDY3-206ENST00000477891 TBC1D2Q9BYX2 928 aa13.25□□□□□ -0.29
MINDY3-206ENST00000477891 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
MINDY3-206ENST00000477891 BECN1Q14457 450 aa13.24□□□□□ -0.29
MINDY3-206ENST00000477891 RGPD8O14715 1765 aaPredicted RBP13.24□□□□□ -0.29
MINDY3-206ENST00000477891 NLRP6P59044 892 aa13.24□□□□□ -0.29
MINDY3-206ENST00000477891 C22orf23Q9BZE7 217 aa13.24□□□□□ -0.29
MINDY3-206ENST00000477891 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
MINDY3-206ENST00000477891 AMPHP49418 695 aa13.23□□□□□ -0.29
MINDY3-206ENST00000477891 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
MINDY3-206ENST00000477891 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
MINDY3-206ENST00000477891 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
MINDY3-206ENST00000477891 CRB1P82279 1406 aa13.23□□□□□ -0.29
MINDY3-206ENST00000477891 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
MINDY3-206ENST00000477891 DIP2AQ14689 1571 aa13.22□□□□□ -0.29
MINDY3-206ENST00000477891 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
MINDY3-206ENST00000477891 FLT4P35916 1363 aa13.22□□□□□ -0.29
MINDY3-206ENST00000477891 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
MINDY3-206ENST00000477891 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
MINDY3-206ENST00000477891 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
MINDY3-206ENST00000477891 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms