RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
CMC1-209ENST00000477739 F6X3S4 739 aa12.12□□□□□ -0.47
CMC1-209ENST00000477739 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
CMC1-209ENST00000477739 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
CMC1-209ENST00000477739 ADGRB1O14514 1584 aa12.11□□□□□ -0.47
CMC1-209ENST00000477739 SETBP1Q9Y6X0 1596 aa12.11□□□□□ -0.47
CMC1-209ENST00000477739 ABCC11Q96J66 1382 aa12.11□□□□□ -0.47
CMC1-209ENST00000477739 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
CMC1-209ENST00000477739 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
CMC1-209ENST00000477739 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
CMC1-209ENST00000477739 GLI2P10070 1586 aa12.1□□□□□ -0.47
CMC1-209ENST00000477739 GDPD2Q9HCC8 539 aa12.1□□□□□ -0.47
CMC1-209ENST00000477739 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
CMC1-209ENST00000477739 FCHSD2O94868 740 aa12.1□□□□□ -0.47
CMC1-209ENST00000477739 HSP90AA2PQ14568 343 aaPredicted RBP12.1□□□□□ -0.47
CMC1-209ENST00000477739 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
CMC1-209ENST00000477739 PRPF40AO75400 957 aaKnown RBP12.09□□□□□ -0.47
CMC1-209ENST00000477739 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
CMC1-209ENST00000477739 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
CMC1-209ENST00000477739 FAM13BQ9NYF5 915 aa12.09□□□□□ -0.47
CMC1-209ENST00000477739 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
CMC1-209ENST00000477739 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
CMC1-209ENST00000477739 AAMPQ13685 434 aa12.09□□□□□ -0.47
CMC1-209ENST00000477739 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
CMC1-209ENST00000477739 NEURL4Q96JN8 1562 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
CMC1-209ENST00000477739 MSNP26038 577 aaKnown RBP12.08□□□□□ -0.48
CMC1-209ENST00000477739 TBC1D9Q6ZT07 1266 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 TULP4Q9NRJ4 1543 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.48
CMC1-209ENST00000477739 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
CMC1-209ENST00000477739 PKP1Q13835 747 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
CMC1-209ENST00000477739 SULT6B1Q6IMI4 303 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 PHF23Q9BUL5 403 aaPredicted RBP12.07□□□□□ -0.48
CMC1-209ENST00000477739 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
CMC1-209ENST00000477739 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
CMC1-209ENST00000477739 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
CMC1-209ENST00000477739 RIMS2Q9UQ26 1411 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 ANO2Q9NQ90 1003 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 DDX11L8A8MPP1 907 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
CMC1-209ENST00000477739 NFE2L2Q16236 605 aa12.06□□□□□ -0.48
CMC1-209ENST00000477739 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
CMC1-209ENST00000477739 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
CMC1-209ENST00000477739 GNAI1P63096 354 aa12.05□□□□□ -0.48
CMC1-209ENST00000477739 IL1RAPL2Q9NP60 686 aa12.05□□□□□ -0.48
CMC1-209ENST00000477739 ESPNB1AK53 854 aa12.04□□□□□ -0.48
CMC1-209ENST00000477739 PPLO60437 1756 aa12.04□□□□□ -0.48
CMC1-209ENST00000477739 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
CMC1-209ENST00000477739 NEK4P51957 841 aa12.04□□□□□ -0.48
CMC1-209ENST00000477739 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
CMC1-209ENST00000477739 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 MRE11P49959 708 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 ANTXR1Q9H6X2 564 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 NGDNQ8NEJ9 315 aaKnown RBP12.03□□□□□ -0.48
CMC1-209ENST00000477739 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
CMC1-209ENST00000477739 FOXO3O43524 673 aa12.02□□□□□ -0.48
CMC1-209ENST00000477739 XPCQ01831 940 aaPredicted RBP12.02□□□□□ -0.48
CMC1-209ENST00000477739 CASC1Q6TDU7 716 aa12.02□□□□□ -0.48
CMC1-209ENST00000477739 ZFYVE9O95405 1425 aa12.02□□□□□ -0.48
CMC1-209ENST00000477739 PPIP5K1Q6PFW1 1433 aa12.02□□□□□ -0.48
CMC1-209ENST00000477739 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
CMC1-209ENST00000477739 CHMP4BQ9H444 224 aaKnown RBP12.02□□□□□ -0.49
CMC1-209ENST00000477739 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
CMC1-209ENST00000477739 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
CMC1-209ENST00000477739 IL16Q14005 1332 aa12.02□□□□□ -0.49
CMC1-209ENST00000477739 FOSBP53539 338 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 FKBP5Q13451 457 aaPredicted RBP12.01□□□□□ -0.49
CMC1-209ENST00000477739 GLIPR1L2Q4G1C9 344 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 IFT172Q9UG01 1749 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 MEIS3Q99687 375 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 ZBTB40Q9NUA8 1239 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 PIK3C2BO00750 1634 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 SYCE3A1L190 88 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 NAP1L2Q9ULW6 460 aaPredicted RBP12.01□□□□□ -0.49
CMC1-209ENST00000477739 TSPOAP1O95153 1857 aa12.01□□□□□ -0.49
CMC1-209ENST00000477739 PPFIA3O75145 1194 aa12□□□□□ -0.49
CMC1-209ENST00000477739 ZMYM3Q14202 1370 aa12□□□□□ -0.49
CMC1-209ENST00000477739 METP08581 1390 aa12□□□□□ -0.49
CMC1-209ENST00000477739 ANXA1P04083 346 aa12□□□□□ -0.49
CMC1-209ENST00000477739 PTPRMP28827 1452 aa12□□□□□ -0.49
CMC1-209ENST00000477739 CDC45O75419 566 aa12□□□□□ -0.49
CMC1-209ENST00000477739 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
CMC1-209ENST00000477739 SIGLEC1Q9BZZ2 1709 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms