RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
LINC00996-201ENST00000477392 NEFMP07197 916 aa20.15■□□□□ 0.82
LINC00996-201ENST00000477392 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
LINC00996-201ENST00000477392 RGPD1P0DJD0 1748 aa20.14■□□□□ 0.81
LINC00996-201ENST00000477392 MVPQ14764 893 aaKnown RBP20.14■□□□□ 0.81
LINC00996-201ENST00000477392 NPM2Q86SE8 214 aaKnown RBP20.14■□□□□ 0.81
LINC00996-201ENST00000477392 PCDHB15Q9Y5E8 787 aa20.14■□□□□ 0.81
LINC00996-201ENST00000477392 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
LINC00996-201ENST00000477392 RGS3P49796 1198 aa20.13■□□□□ 0.81
LINC00996-201ENST00000477392 C8orf34Q49A92 452 aa20.12■□□□□ 0.81
LINC00996-201ENST00000477392 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
LINC00996-201ENST00000477392 FMN2Q9NZ56 1722 aa20.12■□□□□ 0.81
LINC00996-201ENST00000477392 TRIM27P14373 513 aa20.11■□□□□ 0.81
LINC00996-201ENST00000477392 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
LINC00996-201ENST00000477392 FAM161AQ3B820 660 aa20.1■□□□□ 0.81
LINC00996-201ENST00000477392 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
LINC00996-201ENST00000477392 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
LINC00996-201ENST00000477392 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
LINC00996-201ENST00000477392 EIF4A2Q14240 407 aaKnown RBP20.09■□□□□ 0.81
LINC00996-201ENST00000477392 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
LINC00996-201ENST00000477392 ATF7IPQ6VMQ6 1270 aa20.09■□□□□ 0.81
LINC00996-201ENST00000477392 ZNF853P0CG23 659 aa20.08■□□□□ 0.8
LINC00996-201ENST00000477392 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.8
LINC00996-201ENST00000477392 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.8
LINC00996-201ENST00000477392 TTC21AQ8NDW8 1320 aa20.08■□□□□ 0.8
LINC00996-201ENST00000477392 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
LINC00996-201ENST00000477392 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
LINC00996-201ENST00000477392 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
LINC00996-201ENST00000477392 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
LINC00996-201ENST00000477392 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
LINC00996-201ENST00000477392 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
LINC00996-201ENST00000477392 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
LINC00996-201ENST00000477392 ZBTB47Q9UFB7 747 aaPredicted RBP20.06■□□□□ 0.8
LINC00996-201ENST00000477392 LAS1LQ9Y4W2 734 aaKnown RBP20.06■□□□□ 0.8
LINC00996-201ENST00000477392 CHD2O14647 1828 aaKnown RBP20.06■□□□□ 0.8
LINC00996-201ENST00000477392 KCNA6P17658 529 aa20.05■□□□□ 0.8
LINC00996-201ENST00000477392 USP54Q70EL1 1684 aa20.05■□□□□ 0.8
LINC00996-201ENST00000477392 GNAI1P63096 354 aa20.05■□□□□ 0.8
LINC00996-201ENST00000477392 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
LINC00996-201ENST00000477392 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
LINC00996-201ENST00000477392 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
LINC00996-201ENST00000477392 ZNF428Q96B54 188 aa20.03■□□□□ 0.8
LINC00996-201ENST00000477392 MBIPQ9NS73 344 aa20.03■□□□□ 0.8
LINC00996-201ENST00000477392 VAMP4O75379 141 aa20.02■□□□□ 0.8
LINC00996-201ENST00000477392 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.8
LINC00996-201ENST00000477392 SULT6B1Q6IMI4 303 aa20.02■□□□□ 0.8
LINC00996-201ENST00000477392 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
LINC00996-201ENST00000477392 FAM83GA6ND36 823 aa20.02■□□□□ 0.79
LINC00996-201ENST00000477392 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.79
LINC00996-201ENST00000477392 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.79
LINC00996-201ENST00000477392 TSPYL6Q8N831 410 aa20.02■□□□□ 0.79
LINC00996-201ENST00000477392 NGDNQ8NEJ9 315 aaKnown RBP20.02■□□□□ 0.79
LINC00996-201ENST00000477392 RWDD1Q9H446 243 aaPredicted RBP20.02■□□□□ 0.79
LINC00996-201ENST00000477392 MAP3K19Q56UN5 1328 aa20.01■□□□□ 0.79
LINC00996-201ENST00000477392 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
LINC00996-201ENST00000477392 IPO8O15397 1037 aaKnown RBP20■□□□□ 0.79
LINC00996-201ENST00000477392 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
LINC00996-201ENST00000477392 SBNO1A3KN83 1393 aa20■□□□□ 0.79
LINC00996-201ENST00000477392 ARHGEF10O15013 1369 aa20■□□□□ 0.79
LINC00996-201ENST00000477392 MRPL50Q8N5N7 158 aaKnown RBP19.99■□□□□ 0.79
LINC00996-201ENST00000477392 FLT4P35916 1363 aa19.98■□□□□ 0.79
LINC00996-201ENST00000477392 SOX12O15370 315 aa19.98■□□□□ 0.79
LINC00996-201ENST00000477392 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
LINC00996-201ENST00000477392 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
LINC00996-201ENST00000477392 HDAC1Q13547 482 aaPredicted RBP19.97■□□□□ 0.79
LINC00996-201ENST00000477392 C8orf58Q8NAV2 365 aa19.96■□□□□ 0.79
LINC00996-201ENST00000477392 TWISTNBQ3B726 338 aaPredicted RBP19.95■□□□□ 0.78
LINC00996-201ENST00000477392 ANKLE2Q86XL3 938 aa19.95■□□□□ 0.78
LINC00996-201ENST00000477392 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
LINC00996-201ENST00000477392 SETD1BQ9UPS6 1966 aaKnown RBP19.95■□□□□ 0.78
LINC00996-201ENST00000477392 KDRP35968 1356 aa19.94■□□□□ 0.78
LINC00996-201ENST00000477392 ARHGAP45Q92619 1136 aa19.94■□□□□ 0.78
LINC00996-201ENST00000477392 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
LINC00996-201ENST00000477392 ABCC4O15439 1325 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 USP19O94966 1318 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 NLRP6P59044 892 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 CRB1P82279 1406 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
LINC00996-201ENST00000477392 MCM10Q7L590 875 aa19.9■□□□□ 0.78
LINC00996-201ENST00000477392 CHL1O00533 1208 aa19.9■□□□□ 0.78
LINC00996-201ENST00000477392 SMC5Q8IY18 1101 aa19.9■□□□□ 0.78
LINC00996-201ENST00000477392 ADGRL3Q9HAR2 1447 aa19.89■□□□□ 0.77
LINC00996-201ENST00000477392 KIF24Q5T7B8 1368 aa19.89■□□□□ 0.77
LINC00996-201ENST00000477392 AMPHP49418 695 aa19.89■□□□□ 0.77
LINC00996-201ENST00000477392 LRRC37A3O60309 1634 aa19.89■□□□□ 0.77
LINC00996-201ENST00000477392 EYA1Q99502 592 aa19.88■□□□□ 0.77
LINC00996-201ENST00000477392 LTN1O94822 1766 aa19.88■□□□□ 0.77
LINC00996-201ENST00000477392 SEC24BO95487 1268 aa19.88■□□□□ 0.77
LINC00996-201ENST00000477392 KIAA0232Q92628 1395 aa19.87■□□□□ 0.77
LINC00996-201ENST00000477392 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
LINC00996-201ENST00000477392 NUTM2GQ5VZR2 741 aa19.87■□□□□ 0.77
LINC00996-201ENST00000477392 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
LINC00996-201ENST00000477392 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
LINC00996-201ENST00000477392 FOXO3O43524 673 aa19.86■□□□□ 0.77
LINC00996-201ENST00000477392 HOXC9P31274 260 aa19.86■□□□□ 0.77
LINC00996-201ENST00000477392 KRT24Q2M2I5 525 aa19.86■□□□□ 0.77
LINC00996-201ENST00000477392 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
LINC00996-201ENST00000477392 NBR1Q14596 966 aa19.85■□□□□ 0.77
LINC00996-201ENST00000477392 RGS12O14924 1447 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms