RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 PTCH1Q13635 1447 aa26.69■■□□□ 1.86
LIMS2-214ENST00000476932 TOPAZ1Q8N9V7 1692 aa26.69■■□□□ 1.86
LIMS2-214ENST00000476932 BECN1Q14457 450 aa26.68■■□□□ 1.86
LIMS2-214ENST00000476932 UPF2Q9HAU5 1272 aaKnown RBP26.68■■□□□ 1.86
LIMS2-214ENST00000476932 ZNF853P0CG23 659 aa26.68■■□□□ 1.86
LIMS2-214ENST00000476932 PIK3R4Q99570 1358 aa26.68■■□□□ 1.86
LIMS2-214ENST00000476932 PRR36Q9H6K5 1346 aa26.67■■□□□ 1.86
LIMS2-214ENST00000476932 GSE1Q14687 1217 aa26.67■■□□□ 1.86
LIMS2-214ENST00000476932 CCDC61Q9Y6R9 512 aa26.67■■□□□ 1.86
LIMS2-214ENST00000476932 VAMP4O75379 141 aa26.67■■□□□ 1.86
LIMS2-214ENST00000476932 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.66■■□□□ 1.86
LIMS2-214ENST00000476932 IFT57Q9NWB7 429 aa26.66■■□□□ 1.86
LIMS2-214ENST00000476932 TNRQ92752 1358 aa26.65■■□□□ 1.86
LIMS2-214ENST00000476932 MRPL50Q8N5N7 158 aaKnown RBP26.65■■□□□ 1.86
LIMS2-214ENST00000476932 TSPYL6Q8N831 410 aa26.65■■□□□ 1.86
LIMS2-214ENST00000476932 CALD1Q05682 793 aaKnown RBP26.64■■□□□ 1.86
LIMS2-214ENST00000476932 COG3Q96JB2 828 aa26.64■■□□□ 1.86
LIMS2-214ENST00000476932 RRS1Q15050 365 aaKnown RBP26.64■■□□□ 1.85
LIMS2-214ENST00000476932 ROBO2Q9HCK4 1378 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 TMEM2Q9UHN6 1383 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 MBIPQ9NS73 344 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 ADAMTS13Q76LX8 1427 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 GNAI1P63096 354 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 ANTXR1Q9H6X2 564 aa26.63■■□□□ 1.85
LIMS2-214ENST00000476932 TBC1D2Q9BYX2 928 aa26.62■■□□□ 1.85
LIMS2-214ENST00000476932 NALCNQ8IZF0 1738 aa26.62■■□□□ 1.85
LIMS2-214ENST00000476932 NUCB1Q02818 461 aa26.61■■□□□ 1.85
LIMS2-214ENST00000476932 ARHGAP45Q92619 1136 aa26.6■■□□□ 1.85
LIMS2-214ENST00000476932 ZBTB7BO15156 539 aaPredicted RBP26.59■■□□□ 1.85
LIMS2-214ENST00000476932 ESF1Q9H501 851 aaKnown RBP26.59■■□□□ 1.85
LIMS2-214ENST00000476932 ABCC4O15439 1325 aa26.58■■□□□ 1.85
LIMS2-214ENST00000476932 PEAK1Q9H792 1746 aa26.58■■□□□ 1.85
LIMS2-214ENST00000476932 SLKQ9H2G2 1235 aaPredicted RBP26.58■■□□□ 1.84
LIMS2-214ENST00000476932 RGPD1P0DJD0 1748 aa26.57■■□□□ 1.84
LIMS2-214ENST00000476932 OVOS2A0A0J9YW53 1432 aa26.57■■□□□ 1.84
LIMS2-214ENST00000476932 OVOS2Q6IE36 1432 aa26.57■■□□□ 1.84
LIMS2-214ENST00000476932 HDGFP51858 240 aaKnown RBP26.56■■□□□ 1.84
LIMS2-214ENST00000476932 CFAP44Q96MT7 982 aa26.56■■□□□ 1.84
LIMS2-214ENST00000476932 ZNF692Q9BU19 519 aaPredicted RBP26.56■■□□□ 1.84
LIMS2-214ENST00000476932 FAM83GA6ND36 823 aa26.55■■□□□ 1.84
LIMS2-214ENST00000476932 LMOD3Q0VAK6 560 aa26.55■■□□□ 1.84
LIMS2-214ENST00000476932 C22orf23Q9BZE7 217 aa26.55■■□□□ 1.84
LIMS2-214ENST00000476932 MFAP1P55081 439 aaKnown RBP26.55■■□□□ 1.84
LIMS2-214ENST00000476932 C8orf58Q8NAV2 365 aa26.55■■□□□ 1.84
LIMS2-214ENST00000476932 ELL2O00472 640 aaPredicted RBP26.54■■□□□ 1.84
LIMS2-214ENST00000476932 TWISTNBQ3B726 338 aaPredicted RBP26.54■■□□□ 1.84
LIMS2-214ENST00000476932 LNPKQ9C0E8 428 aa26.54■■□□□ 1.84
LIMS2-214ENST00000476932 CHD1LQ86WJ1 897 aa26.53■■□□□ 1.84
LIMS2-214ENST00000476932 TTC21BQ7Z4L5 1316 aa26.52■■□□□ 1.84
LIMS2-214ENST00000476932 C1orf115Q9H7X2 142 aa26.51■■□□□ 1.84
LIMS2-214ENST00000476932 PLEKHG1Q9ULL1 1385 aa26.51■■□□□ 1.83
LIMS2-214ENST00000476932 DCTN1Q14203 1278 aa26.51■■□□□ 1.83
LIMS2-214ENST00000476932 AEBP1Q8IUX7 1158 aa26.51■■□□□ 1.83
LIMS2-214ENST00000476932 IL27Q8NEV9 243 aa26.51■■□□□ 1.83
LIMS2-214ENST00000476932 EIF4A2Q14240 407 aaKnown RBP26.5■■□□□ 1.83
LIMS2-214ENST00000476932 USP6P35125 1406 aa26.5■■□□□ 1.83
LIMS2-214ENST00000476932 SIRT2Q8IXJ6 389 aa26.49■■□□□ 1.83
LIMS2-214ENST00000476932 FMN2Q9NZ56 1722 aa26.49■■□□□ 1.83
LIMS2-214ENST00000476932 ACEP12821 1306 aa26.48■■□□□ 1.83
LIMS2-214ENST00000476932 CHMP4BQ9H444 224 aaKnown RBP26.48■■□□□ 1.83
LIMS2-214ENST00000476932 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
LIMS2-214ENST00000476932 LTKP29376 864 aa26.48■■□□□ 1.83
LIMS2-214ENST00000476932 GCC1Q96CN9 775 aa26.47■■□□□ 1.83
LIMS2-214ENST00000476932 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
LIMS2-214ENST00000476932 SSH2Q76I76 1423 aa26.46■■□□□ 1.83
LIMS2-214ENST00000476932 BMP2KLQ5H9B9 411 aa26.45■■□□□ 1.82
LIMS2-214ENST00000476932 SULT6B1Q6IMI4 303 aa26.45■■□□□ 1.82
LIMS2-214ENST00000476932 USP31Q70CQ4 1352 aa26.45■■□□□ 1.82
LIMS2-214ENST00000476932 API5Q9BZZ5 524 aaKnown RBP26.44■■□□□ 1.82
LIMS2-214ENST00000476932 RGS12O14924 1447 aa26.44■■□□□ 1.82
LIMS2-214ENST00000476932 ANKRD45Q5TZF3 282 aa26.43■■□□□ 1.82
LIMS2-214ENST00000476932 KIF24Q5T7B8 1368 aa26.43■■□□□ 1.82
LIMS2-214ENST00000476932 RBM25P49756 843 aaKnown RBP26.42■■□□□ 1.82
LIMS2-214ENST00000476932 RGPD8O14715 1765 aaPredicted RBP26.41■■□□□ 1.82
LIMS2-214ENST00000476932 RIMS1Q86UR5 1692 aaKnown RBP26.41■■□□□ 1.82
LIMS2-214ENST00000476932 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
LIMS2-214ENST00000476932 BRPF3Q9ULD4 1205 aa26.4■■□□□ 1.82
LIMS2-214ENST00000476932 HSP90AB2PQ58FF8 381 aa26.39■■□□□ 1.82
LIMS2-214ENST00000476932 NCOA3Q9Y6Q9 1424 aa26.39■■□□□ 1.82
LIMS2-214ENST00000476932 CHL1O00533 1208 aa26.39■■□□□ 1.81
LIMS2-214ENST00000476932 KRT24Q2M2I5 525 aa26.39■■□□□ 1.81
LIMS2-214ENST00000476932 SPRYD3Q8NCJ5 442 aa26.38■■□□□ 1.81
LIMS2-214ENST00000476932 SLIT1O75093 1534 aa26.38■■□□□ 1.81
LIMS2-214ENST00000476932 KIAA0232Q92628 1395 aa26.37■■□□□ 1.81
LIMS2-214ENST00000476932 ARHGAP23Q9P227 1491 aa26.37■■□□□ 1.81
LIMS2-214ENST00000476932 CRB1P82279 1406 aa26.37■■□□□ 1.81
LIMS2-214ENST00000476932 ATP10DQ9P241 1426 aa26.37■■□□□ 1.81
LIMS2-214ENST00000476932 MCM10Q7L590 875 aa26.36■■□□□ 1.81
LIMS2-214ENST00000476932 INTS3Q68E01 1043 aaKnown RBP26.36■■□□□ 1.81
LIMS2-214ENST00000476932 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
LIMS2-214ENST00000476932 DIP2AQ14689 1571 aa26.35■■□□□ 1.81
LIMS2-214ENST00000476932 PIK3C2AO00443 1686 aa26.35■■□□□ 1.81
LIMS2-214ENST00000476932 ARHGEF10O15013 1369 aa26.34■■□□□ 1.81
LIMS2-214ENST00000476932 HSCBQ8IWL3 235 aa26.32■■□□□ 1.8
LIMS2-214ENST00000476932 SNX21Q969T3 373 aa26.32■■□□□ 1.8
LIMS2-214ENST00000476932 KIF2CQ99661 725 aa26.32■■□□□ 1.8
LIMS2-214ENST00000476932 CHMP5Q9NZZ3 219 aa26.32■■□□□ 1.8
LIMS2-214ENST00000476932 CEBPAP49715 358 aaPredicted RBP26.31■■□□□ 1.8
LIMS2-214ENST00000476932 TBC1D9Q6ZT07 1266 aa26.31■■□□□ 1.8
LIMS2-214ENST00000476932 MAP3K19Q56UN5 1328 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms