RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 RIPK4P57078 832 aa26.74■■□□□ 1.87
ITGA4-207ENST00000476089 MST1RQ04912 1400 aa26.74■■□□□ 1.87
ITGA4-207ENST00000476089 MARF1Q9Y4F3 1742 aaKnown RBP26.74■■□□□ 1.87
ITGA4-207ENST00000476089 KIF24Q5T7B8 1368 aa26.74■■□□□ 1.87
ITGA4-207ENST00000476089 PELP1Q8IZL8 1130 aaKnown RBP26.72■■□□□ 1.87
ITGA4-207ENST00000476089 PPP4R2Q9NY27 417 aa26.72■■□□□ 1.87
ITGA4-207ENST00000476089 KRT28Q7Z3Y7 464 aa26.72■■□□□ 1.87
ITGA4-207ENST00000476089 KCNH5Q8NCM2 988 aa26.71■■□□□ 1.87
ITGA4-207ENST00000476089 MYH16Q9H6N6 1097 aa26.71■■□□□ 1.87
ITGA4-207ENST00000476089 XPCQ01831 940 aaPredicted RBP26.7■■□□□ 1.87
ITGA4-207ENST00000476089 TRIM35Q9UPQ4 493 aa26.69■■□□□ 1.86
ITGA4-207ENST00000476089 NFE2L2Q16236 605 aa26.69■■□□□ 1.86
ITGA4-207ENST00000476089 SULT6B1Q6IMI4 303 aa26.68■■□□□ 1.86
ITGA4-207ENST00000476089 ZNF335Q9H4Z2 1342 aaPredicted RBP26.68■■□□□ 1.86
ITGA4-207ENST00000476089 PHACTR3Q96KR7 559 aa26.67■■□□□ 1.86
ITGA4-207ENST00000476089 LMOD2Q6P5Q4 547 aa26.67■■□□□ 1.86
ITGA4-207ENST00000476089 HOXC9P31274 260 aa26.66■■□□□ 1.86
ITGA4-207ENST00000476089 IL16Q14005 1332 aa26.66■■□□□ 1.86
ITGA4-207ENST00000476089 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.65■■□□□ 1.86
ITGA4-207ENST00000476089 RTL1A6NKG5 1358 aa26.65■■□□□ 1.86
ITGA4-207ENST00000476089 XIRP1Q702N8 1843 aaKnown RBP26.65■■□□□ 1.86
ITGA4-207ENST00000476089 TRPM3Q9HCF6 1732 aaPredicted RBP26.65■■□□□ 1.86
ITGA4-207ENST00000476089 ARHGEF10O15013 1369 aa26.64■■□□□ 1.86
ITGA4-207ENST00000476089 RGPD1P0DJD0 1748 aa26.63■■□□□ 1.85
ITGA4-207ENST00000476089 LMOD3Q0VAK6 560 aa26.63■■□□□ 1.85
ITGA4-207ENST00000476089 NPHP3Q7Z494 1330 aa26.62■■□□□ 1.85
ITGA4-207ENST00000476089 CALD1Q05682 793 aaKnown RBP26.62■■□□□ 1.85
ITGA4-207ENST00000476089 AEBP1Q8IUX7 1158 aa26.62■■□□□ 1.85
ITGA4-207ENST00000476089 NFAT5O94916 1531 aa26.61■■□□□ 1.85
ITGA4-207ENST00000476089 LTN1O94822 1766 aa26.61■■□□□ 1.85
ITGA4-207ENST00000476089 PLIN1O60240 522 aa26.59■■□□□ 1.85
ITGA4-207ENST00000476089 GCP02774 474 aa26.59■■□□□ 1.85
ITGA4-207ENST00000476089 IP6K1Q92551 441 aa26.59■■□□□ 1.85
ITGA4-207ENST00000476089 SLIT3O75094 1523 aa26.58■■□□□ 1.85
ITGA4-207ENST00000476089 EYA1Q99502 592 aa26.58■■□□□ 1.84
ITGA4-207ENST00000476089 IGSF1Q8N6C5 1336 aa26.57■■□□□ 1.84
ITGA4-207ENST00000476089 USP19O94966 1318 aa26.57■■□□□ 1.84
ITGA4-207ENST00000476089 FANCIQ9NVI1 1328 aa26.56■■□□□ 1.84
ITGA4-207ENST00000476089 ZBTB7CA1YPR0 619 aa26.55■■□□□ 1.84
ITGA4-207ENST00000476089 LTV1Q96GA3 475 aaPredicted RBP26.55■■□□□ 1.84
ITGA4-207ENST00000476089 ALS2Q96Q42 1657 aa26.54■■□□□ 1.84
ITGA4-207ENST00000476089 KDRP35968 1356 aa26.54■■□□□ 1.84
ITGA4-207ENST00000476089 PLEKHG5O94827 1062 aa26.54■■□□□ 1.84
ITGA4-207ENST00000476089 CT47B1P0C2W7 299 aaPredicted RBP26.54■■□□□ 1.84
ITGA4-207ENST00000476089 TSR2Q969E8 191 aaKnown RBP26.54■■□□□ 1.84
ITGA4-207ENST00000476089 DDX17Q92841 729 aaKnown RBP26.53■■□□□ 1.84
ITGA4-207ENST00000476089 DLG5Q8TDM6 1919 aa26.53■■□□□ 1.84
ITGA4-207ENST00000476089 SLAIN2Q9P270 581 aa26.53■■□□□ 1.84
ITGA4-207ENST00000476089 PHRF1Q9P1Y6 1649 aaKnown RBP26.53■■□□□ 1.84
ITGA4-207ENST00000476089 BCAR3O75815 825 aa26.52■■□□□ 1.84
ITGA4-207ENST00000476089 ARHGEF25Q86VW2 580 aa26.52■■□□□ 1.84
ITGA4-207ENST00000476089 B4GALNT3Q6L9W6 998 aa26.51■■□□□ 1.83
ITGA4-207ENST00000476089 BRINP3Q76B58 766 aa26.51■■□□□ 1.83
ITGA4-207ENST00000476089 EXOC6Q8TAG9 804 aa26.51■■□□□ 1.83
ITGA4-207ENST00000476089 CCDC136Q96JN2 1154 aa26.5■■□□□ 1.83
ITGA4-207ENST00000476089 LAS1LQ9Y4W2 734 aaKnown RBP26.5■■□□□ 1.83
ITGA4-207ENST00000476089 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
ITGA4-207ENST00000476089 GNAI1P63096 354 aa26.49■■□□□ 1.83
ITGA4-207ENST00000476089 EXOSC9Q06265 439 aaKnown RBP26.49■■□□□ 1.83
ITGA4-207ENST00000476089 TNS3Q68CZ2 1445 aa26.49■■□□□ 1.83
ITGA4-207ENST00000476089 IFT57Q9NWB7 429 aa26.49■■□□□ 1.83
ITGA4-207ENST00000476089 PXDNQ92626 1479 aa26.48■■□□□ 1.83
ITGA4-207ENST00000476089 THUMPD2Q9BTF0 503 aaKnown RBP26.48■■□□□ 1.83
ITGA4-207ENST00000476089 CANXP27824 592 aaKnown RBP26.47■■□□□ 1.83
ITGA4-207ENST00000476089 GAS2L2Q8NHY3 880 aa26.46■■□□□ 1.83
ITGA4-207ENST00000476089 CRBNQ96SW2 442 aa26.46■■□□□ 1.83
ITGA4-207ENST00000476089 SPATA31A3Q5VYP0 1347 aa26.45■■□□□ 1.83
ITGA4-207ENST00000476089 FAM83GA6ND36 823 aa26.44■■□□□ 1.82
ITGA4-207ENST00000476089 C20orf194Q5TEA3 1177 aa26.44■■□□□ 1.82
ITGA4-207ENST00000476089 MTHFSDQ2M296 383 aaKnown RBP26.44■■□□□ 1.82
ITGA4-207ENST00000476089 CFAP44Q96MT7 982 aa26.44■■□□□ 1.82
ITGA4-207ENST00000476089 MED1Q15648 1581 aaPredicted RBP26.43■■□□□ 1.82
ITGA4-207ENST00000476089 RTF1Q92541 710 aaKnown RBP26.43■■□□□ 1.82
ITGA4-207ENST00000476089 ZNF853P0CG23 659 aa26.42■■□□□ 1.82
ITGA4-207ENST00000476089 ZC3H6P61129 1189 aaKnown RBP26.42■■□□□ 1.82
ITGA4-207ENST00000476089 DCTN1Q14203 1278 aa26.42■■□□□ 1.82
ITGA4-207ENST00000476089 PDE3AQ14432 1141 aa26.4■■□□□ 1.82
ITGA4-207ENST00000476089 NBPF6Q5VWK0 638 aa26.4■■□□□ 1.82
ITGA4-207ENST00000476089 FRAT1Q92837 279 aaPredicted RBP26.4■■□□□ 1.82
ITGA4-207ENST00000476089 NBPF4Q96M43 638 aa26.4■■□□□ 1.82
ITGA4-207ENST00000476089 USHBP1Q8N6Y0 703 aa26.39■■□□□ 1.82
ITGA4-207ENST00000476089 ANKRD24Q8TF21 1146 aa26.39■■□□□ 1.81
ITGA4-207ENST00000476089 MBIPQ9NS73 344 aa26.39■■□□□ 1.81
ITGA4-207ENST00000476089 MCM10Q7L590 875 aa26.38■■□□□ 1.81
ITGA4-207ENST00000476089 ZNF428Q96B54 188 aa26.38■■□□□ 1.81
ITGA4-207ENST00000476089 BCL2L13Q9BXK5 485 aa26.38■■□□□ 1.81
ITGA4-207ENST00000476089 HTATSF1O43719 755 aaKnown RBP26.37■■□□□ 1.81
ITGA4-207ENST00000476089 SOS2Q07890 1332 aaPredicted RBP26.37■■□□□ 1.81
ITGA4-207ENST00000476089 SMC4Q9NTJ3 1288 aa26.37■■□□□ 1.81
ITGA4-207ENST00000476089 CABLES1Q8TDN4 633 aa26.36■■□□□ 1.81
ITGA4-207ENST00000476089 LRRC59Q96AG4 307 aaKnown RBP26.35■■□□□ 1.81
ITGA4-207ENST00000476089 AXIN2Q9Y2T1 843 aa26.35■■□□□ 1.81
ITGA4-207ENST00000476089 GNAT3A8MTJ3 354 aa26.35■■□□□ 1.81
ITGA4-207ENST00000476089 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
ITGA4-207ENST00000476089 RGPD2P0DJD1 1756 aa26.33■■□□□ 1.8
ITGA4-207ENST00000476089 SSH1Q8WYL5 1049 aa26.32■■□□□ 1.8
ITGA4-207ENST00000476089 CHL1O00533 1208 aa26.31■■□□□ 1.8
ITGA4-207ENST00000476089 MS4A1P11836 297 aa26.31■■□□□ 1.8
ITGA4-207ENST00000476089 ZKSCAN2Q63HK3 967 aa26.31■■□□□ 1.8
ITGA4-207ENST00000476089 MAP3K5Q99683 1374 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms