RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
RNF220-211ENST00000474956 ITPRIPQ8IWB1 547 aa15.88■□□□□ 0.13
RNF220-211ENST00000474956 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 RGPD8O14715 1765 aaPredicted RBP15.87■□□□□ 0.13
RNF220-211ENST00000474956 ITSN1Q15811 1721 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
RNF220-211ENST00000474956 AKAP12Q02952 1782 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
RNF220-211ENST00000474956 KRT24Q2M2I5 525 aa15.86■□□□□ 0.13
RNF220-211ENST00000474956 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
RNF220-211ENST00000474956 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
RNF220-211ENST00000474956 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
RNF220-211ENST00000474956 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
RNF220-211ENST00000474956 EID1Q9Y6B2 187 aa15.85■□□□□ 0.13
RNF220-211ENST00000474956 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
RNF220-211ENST00000474956 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
RNF220-211ENST00000474956 MBIPQ9NS73 344 aa15.84■□□□□ 0.13
RNF220-211ENST00000474956 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
RNF220-211ENST00000474956 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
RNF220-211ENST00000474956 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
RNF220-211ENST00000474956 KCNA6P17658 529 aa15.83■□□□□ 0.12
RNF220-211ENST00000474956 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
RNF220-211ENST00000474956 SIRT1Q96EB6 747 aa15.83■□□□□ 0.12
RNF220-211ENST00000474956 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
RNF220-211ENST00000474956 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
RNF220-211ENST00000474956 MCM10Q7L590 875 aa15.82■□□□□ 0.12
RNF220-211ENST00000474956 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
RNF220-211ENST00000474956 FOXO3O43524 673 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 USP6P35125 1406 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 IL16Q14005 1332 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 VAMP4O75379 141 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
RNF220-211ENST00000474956 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
RNF220-211ENST00000474956 NRKQ7Z2Y5 1582 aa15.8■□□□□ 0.12
RNF220-211ENST00000474956 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
RNF220-211ENST00000474956 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
RNF220-211ENST00000474956 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
RNF220-211ENST00000474956 TOPAZ1Q8N9V7 1692 aa15.8■□□□□ 0.12
RNF220-211ENST00000474956 USP19O94966 1318 aa15.8■□□□□ 0.12
RNF220-211ENST00000474956 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
RNF220-211ENST00000474956 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
RNF220-211ENST00000474956 OVOS2A0A0J9YW53 1432 aa15.79■□□□□ 0.12
RNF220-211ENST00000474956 OVOS2Q6IE36 1432 aa15.79■□□□□ 0.12
RNF220-211ENST00000474956 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
RNF220-211ENST00000474956 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
RNF220-211ENST00000474956 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
RNF220-211ENST00000474956 ZNF853P0CG23 659 aa15.77■□□□□ 0.11
RNF220-211ENST00000474956 ARHGAP23Q9P227 1491 aa15.77■□□□□ 0.11
RNF220-211ENST00000474956 SLIT1O75093 1534 aa15.76■□□□□ 0.11
RNF220-211ENST00000474956 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
RNF220-211ENST00000474956 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
RNF220-211ENST00000474956 RWDD1Q9H446 243 aaPredicted RBP15.76■□□□□ 0.11
RNF220-211ENST00000474956 TBX22Q9Y458 520 aa15.76■□□□□ 0.11
RNF220-211ENST00000474956 DIP2AQ14689 1571 aa15.76■□□□□ 0.11
RNF220-211ENST00000474956 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
RNF220-211ENST00000474956 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
RNF220-211ENST00000474956 ZBTB40Q9NUA8 1239 aa15.76■□□□□ 0.11
RNF220-211ENST00000474956 SSH2Q76I76 1423 aa15.74■□□□□ 0.11
RNF220-211ENST00000474956 IFT57Q9NWB7 429 aa15.74■□□□□ 0.11
RNF220-211ENST00000474956 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
RNF220-211ENST00000474956 LTV1Q96GA3 475 aaPredicted RBP15.74■□□□□ 0.11
RNF220-211ENST00000474956 GNAI1P63096 354 aa15.73■□□□□ 0.11
RNF220-211ENST00000474956 CFAP44Q96MT7 982 aa15.73■□□□□ 0.11
RNF220-211ENST00000474956 BECN1Q14457 450 aa15.73■□□□□ 0.11
RNF220-211ENST00000474956 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
RNF220-211ENST00000474956 KIF16BQ96L93 1317 aa15.73■□□□□ 0.11
RNF220-211ENST00000474956 NLRP6P59044 892 aa15.72■□□□□ 0.11
RNF220-211ENST00000474956 AAMPQ13685 434 aa15.72■□□□□ 0.11
RNF220-211ENST00000474956 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.11
RNF220-211ENST00000474956 ALDH1L2Q3SY69 923 aa15.71■□□□□ 0.11
RNF220-211ENST00000474956 LNPKQ9C0E8 428 aa15.71■□□□□ 0.11
RNF220-211ENST00000474956 MTHFSDQ2M296 383 aaKnown RBP15.71■□□□□ 0.1
RNF220-211ENST00000474956 USHBP1Q8N6Y0 703 aa15.71■□□□□ 0.1
RNF220-211ENST00000474956 PIK3C2AO00443 1686 aa15.71■□□□□ 0.1
RNF220-211ENST00000474956 NALCNQ8IZF0 1738 aa15.7■□□□□ 0.1
RNF220-211ENST00000474956 CEP170BQ9Y4F5 1589 aaPredicted RBP15.7■□□□□ 0.1
RNF220-211ENST00000474956 EYA1Q99502 592 aa15.7■□□□□ 0.1
RNF220-211ENST00000474956 AMPHP49418 695 aa15.7■□□□□ 0.1
RNF220-211ENST00000474956 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
RNF220-211ENST00000474956 ZBTB7BO15156 539 aaPredicted RBP15.7■□□□□ 0.1
RNF220-211ENST00000474956 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
RNF220-211ENST00000474956 USP31Q70CQ4 1352 aa15.69■□□□□ 0.1
RNF220-211ENST00000474956 PTCH1Q13635 1447 aa15.69■□□□□ 0.1
RNF220-211ENST00000474956 IPO8O15397 1037 aaKnown RBP15.69■□□□□ 0.1
RNF220-211ENST00000474956 ZBTB7CA1YPR0 619 aa15.69■□□□□ 0.1
RNF220-211ENST00000474956 HDAC1Q13547 482 aaPredicted RBP15.68■□□□□ 0.1
RNF220-211ENST00000474956 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
RNF220-211ENST00000474956 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
RNF220-211ENST00000474956 RGPD1P0DJD0 1748 aa15.67■□□□□ 0.1
RNF220-211ENST00000474956 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
RNF220-211ENST00000474956 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
RNF220-211ENST00000474956 SMC5Q8IY18 1101 aa15.66■□□□□ 0.1
RNF220-211ENST00000474956 CALD1Q05682 793 aaKnown RBP15.65■□□□□ 0.1
RNF220-211ENST00000474956 FMN2Q9NZ56 1722 aa15.65■□□□□ 0.1
RNF220-211ENST00000474956 LMOD3Q0VAK6 560 aa15.65■□□□□ 0.1
RNF220-211ENST00000474956 CHL1O00533 1208 aa15.65■□□□□ 0.1
RNF220-211ENST00000474956 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms