RNA–Protein interactions for RNA: ENST00000473377.5

CGN-206, Transcript of cingulin, humanhuman

TSL 1 (best)

Gene CGN, Length 2,956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGN-206ENST00000473377 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
CGN-206ENST00000473377 MAP3K19Q56UN5 1328 aa11.84□□□□□ -0.51
CGN-206ENST00000473377 NEFMP07197 916 aa11.84□□□□□ -0.51
CGN-206ENST00000473377 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
CGN-206ENST00000473377 RGS3P49796 1198 aa11.84□□□□□ -0.51
CGN-206ENST00000473377 NLRP6P59044 892 aa11.84□□□□□ -0.51
CGN-206ENST00000473377 PEAK1Q9H792 1746 aa11.83□□□□□ -0.51
CGN-206ENST00000473377 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
CGN-206ENST00000473377 ADAMTSL3P82987 1691 aa11.83□□□□□ -0.52
CGN-206ENST00000473377 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
CGN-206ENST00000473377 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
CGN-206ENST00000473377 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
CGN-206ENST00000473377 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
CGN-206ENST00000473377 CENPQQ7L2Z9 268 aaPredicted RBP11.82□□□□□ -0.52
CGN-206ENST00000473377 FOXO3O43524 673 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 PDE4AP27815 886 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
CGN-206ENST00000473377 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
CGN-206ENST00000473377 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 TRIM27P14373 513 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 MCM10Q7L590 875 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 ABTB2Q8N961 1025 aa11.81□□□□□ -0.52
CGN-206ENST00000473377 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
CGN-206ENST00000473377 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
CGN-206ENST00000473377 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
CGN-206ENST00000473377 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
CGN-206ENST00000473377 AMPHP49418 695 aa11.8□□□□□ -0.52
CGN-206ENST00000473377 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
CGN-206ENST00000473377 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 FTSJ3Q8IY81 847 aaKnown RBP11.79□□□□□ -0.52
CGN-206ENST00000473377 NALCNQ8IZF0 1738 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 IL16Q14005 1332 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 ORAI2Q96SN7 254 aa11.79□□□□□ -0.52
CGN-206ENST00000473377 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 DZIP1LQ8IYY4 767 aaKnown RBP11.78□□□□□ -0.52
CGN-206ENST00000473377 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 MIS18AQ9NYP9 233 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
CGN-206ENST00000473377 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 PIK3R4Q99570 1358 aa11.78□□□□□ -0.52
CGN-206ENST00000473377 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
CGN-206ENST00000473377 BACH2Q9BYV9 841 aa11.77□□□□□ -0.52
CGN-206ENST00000473377 SETD1BQ9UPS6 1966 aaKnown RBP11.77□□□□□ -0.52
CGN-206ENST00000473377 EYA1Q99502 592 aa11.77□□□□□ -0.53
CGN-206ENST00000473377 FMN2Q9NZ56 1722 aa11.77□□□□□ -0.53
CGN-206ENST00000473377 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
CGN-206ENST00000473377 MVPQ14764 893 aaKnown RBP11.76□□□□□ -0.53
CGN-206ENST00000473377 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 HSPA2P54652 639 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 ATF7IPQ6VMQ6 1270 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 VAMP4O75379 141 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 FLT4P35916 1363 aa11.76□□□□□ -0.53
CGN-206ENST00000473377 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
CGN-206ENST00000473377 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 GNAI1P63096 354 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 PSME1Q06323 249 aa11.75□□□□□ -0.53
CGN-206ENST00000473377 HOXC9P31274 260 aa11.74□□□□□ -0.53
CGN-206ENST00000473377 CT47B1P0C2W7 299 aaPredicted RBP11.74□□□□□ -0.53
CGN-206ENST00000473377 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
CGN-206ENST00000473377 DDX17Q92841 729 aaKnown RBP11.74□□□□□ -0.53
CGN-206ENST00000473377 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
CGN-206ENST00000473377 MS4A1P11836 297 aa11.73□□□□□ -0.53
CGN-206ENST00000473377 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
CGN-206ENST00000473377 ADGRL3Q9HAR2 1447 aa11.73□□□□□ -0.53
CGN-206ENST00000473377 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
CGN-206ENST00000473377 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
CGN-206ENST00000473377 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
CGN-206ENST00000473377 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
CGN-206ENST00000473377 RGPD1P0DJD0 1748 aa11.71□□□□□ -0.53
CGN-206ENST00000473377 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.53
CGN-206ENST00000473377 CALD1Q05682 793 aaKnown RBP11.71□□□□□ -0.54
CGN-206ENST00000473377 C8orf34Q49A92 452 aa11.71□□□□□ -0.54
CGN-206ENST00000473377 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
CGN-206ENST00000473377 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
CGN-206ENST00000473377 CHL1O00533 1208 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 DDX19BQ9UMR2 479 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
CGN-206ENST00000473377 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 KDRP35968 1356 aa11.68□□□□□ -0.54
CGN-206ENST00000473377 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
CGN-206ENST00000473377 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
CGN-206ENST00000473377 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
CGN-206ENST00000473377 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms