RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
UBXN11-213ENST00000472155 HSP90AB2PQ58FF8 381 aa19.23■□□□□ 0.67
UBXN11-213ENST00000472155 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
UBXN11-213ENST00000472155 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
UBXN11-213ENST00000472155 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
UBXN11-213ENST00000472155 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
UBXN11-213ENST00000472155 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
UBXN11-213ENST00000472155 MBIPQ9NS73 344 aa19.22■□□□□ 0.67
UBXN11-213ENST00000472155 DLG5Q8TDM6 1919 aa19.22■□□□□ 0.67
UBXN11-213ENST00000472155 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
UBXN11-213ENST00000472155 NEFMP07197 916 aa19.21■□□□□ 0.67
UBXN11-213ENST00000472155 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
UBXN11-213ENST00000472155 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
UBXN11-213ENST00000472155 USP19O94966 1318 aa19.2■□□□□ 0.66
UBXN11-213ENST00000472155 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
UBXN11-213ENST00000472155 USP6P35125 1406 aa19.2■□□□□ 0.66
UBXN11-213ENST00000472155 VAMP4O75379 141 aa19.2■□□□□ 0.66
UBXN11-213ENST00000472155 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
UBXN11-213ENST00000472155 C8orf58Q8NAV2 365 aa19.19■□□□□ 0.66
UBXN11-213ENST00000472155 NRKQ7Z2Y5 1582 aa19.19■□□□□ 0.66
UBXN11-213ENST00000472155 KRT24Q2M2I5 525 aa19.19■□□□□ 0.66
UBXN11-213ENST00000472155 TOPAZ1Q8N9V7 1692 aa19.18■□□□□ 0.66
UBXN11-213ENST00000472155 OVOS2A0A0J9YW53 1432 aa19.18■□□□□ 0.66
UBXN11-213ENST00000472155 OVOS2Q6IE36 1432 aa19.18■□□□□ 0.66
UBXN11-213ENST00000472155 PEAK1Q9H792 1746 aa19.18■□□□□ 0.66
UBXN11-213ENST00000472155 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
UBXN11-213ENST00000472155 FER1L4A9Z1Z3 1794 aa19.17■□□□□ 0.66
UBXN11-213ENST00000472155 ZNF853P0CG23 659 aa19.17■□□□□ 0.66
UBXN11-213ENST00000472155 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
UBXN11-213ENST00000472155 NUTM2GQ5VZR2 741 aa19.16■□□□□ 0.66
UBXN11-213ENST00000472155 KCNA6P17658 529 aa19.16■□□□□ 0.66
UBXN11-213ENST00000472155 MCM10Q7L590 875 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 C1orf115Q9H7X2 142 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 TBX22Q9Y458 520 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 SLIT1O75093 1534 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
UBXN11-213ENST00000472155 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
UBXN11-213ENST00000472155 IFT57Q9NWB7 429 aa19.14■□□□□ 0.65
UBXN11-213ENST00000472155 SSH2Q76I76 1423 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 FOXO3O43524 673 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 ALDH1L2Q3SY69 923 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 KIF16BQ96L93 1317 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 GNAI1P63096 354 aa19.13■□□□□ 0.65
UBXN11-213ENST00000472155 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
UBXN11-213ENST00000472155 NGDNQ8NEJ9 315 aaKnown RBP19.13■□□□□ 0.65
UBXN11-213ENST00000472155 AAMPQ13685 434 aa19.12■□□□□ 0.65
UBXN11-213ENST00000472155 TWISTNBQ3B726 338 aaPredicted RBP19.12■□□□□ 0.65
UBXN11-213ENST00000472155 CFAP44Q96MT7 982 aa19.12■□□□□ 0.65
UBXN11-213ENST00000472155 VIRMAQ69YN4 1812 aaKnown RBP19.11■□□□□ 0.65
UBXN11-213ENST00000472155 MIS18AQ9NYP9 233 aa19.11■□□□□ 0.65
UBXN11-213ENST00000472155 DIP2AQ14689 1571 aa19.11■□□□□ 0.65
UBXN11-213ENST00000472155 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
UBXN11-213ENST00000472155 IPO8O15397 1037 aaKnown RBP19.1■□□□□ 0.65
UBXN11-213ENST00000472155 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
UBXN11-213ENST00000472155 HDAC1Q13547 482 aaPredicted RBP19.09■□□□□ 0.65
UBXN11-213ENST00000472155 USP31Q70CQ4 1352 aa19.08■□□□□ 0.65
UBXN11-213ENST00000472155 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
UBXN11-213ENST00000472155 DEKP35659 375 aaKnown RBP19.07■□□□□ 0.64
UBXN11-213ENST00000472155 PTCH1Q13635 1447 aa19.07■□□□□ 0.64
UBXN11-213ENST00000472155 ZBTB7BO15156 539 aaPredicted RBP19.07■□□□□ 0.64
UBXN11-213ENST00000472155 CALD1Q05682 793 aaKnown RBP19.06■□□□□ 0.64
UBXN11-213ENST00000472155 SMC5Q8IY18 1101 aa19.05■□□□□ 0.64
UBXN11-213ENST00000472155 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
UBXN11-213ENST00000472155 NLRP6P59044 892 aa19.05■□□□□ 0.64
UBXN11-213ENST00000472155 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
UBXN11-213ENST00000472155 PIK3C2AO00443 1686 aa19.04■□□□□ 0.64
UBXN11-213ENST00000472155 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
UBXN11-213ENST00000472155 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
UBXN11-213ENST00000472155 SIRT2Q8IXJ6 389 aa19.04■□□□□ 0.64
UBXN11-213ENST00000472155 EYA1Q99502 592 aa19.04■□□□□ 0.64
UBXN11-213ENST00000472155 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
UBXN11-213ENST00000472155 XRN1Q8IZH2 1706 aaKnown RBP19.03■□□□□ 0.64
UBXN11-213ENST00000472155 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
UBXN11-213ENST00000472155 AMPHP49418 695 aa19.02■□□□□ 0.64
UBXN11-213ENST00000472155 ABCC4O15439 1325 aa19.02■□□□□ 0.64
UBXN11-213ENST00000472155 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.63
UBXN11-213ENST00000472155 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
UBXN11-213ENST00000472155 CHL1O00533 1208 aa19.01■□□□□ 0.63
UBXN11-213ENST00000472155 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
UBXN11-213ENST00000472155 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
UBXN11-213ENST00000472155 ZNF428Q96B54 188 aa19.01■□□□□ 0.63
UBXN11-213ENST00000472155 DAXXQ9UER7 740 aaPredicted RBP19.01■□□□□ 0.63
UBXN11-213ENST00000472155 C14orf37Q86TY3 774 aa19■□□□□ 0.63
UBXN11-213ENST00000472155 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
UBXN11-213ENST00000472155 ARHGAP45Q92619 1136 aa18.99■□□□□ 0.63
UBXN11-213ENST00000472155 SBNO1A3KN83 1393 aa18.99■□□□□ 0.63
UBXN11-213ENST00000472155 FLT4P35916 1363 aa18.99■□□□□ 0.63
UBXN11-213ENST00000472155 NUCB1Q02818 461 aa18.99■□□□□ 0.63
UBXN11-213ENST00000472155 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
UBXN11-213ENST00000472155 CRB1P82279 1406 aa18.98■□□□□ 0.63
UBXN11-213ENST00000472155 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
UBXN11-213ENST00000472155 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
UBXN11-213ENST00000472155 TBC1D32Q96NH3 1257 aa18.97■□□□□ 0.63
UBXN11-213ENST00000472155 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
UBXN11-213ENST00000472155 ANKRD45Q5TZF3 282 aa18.97■□□□□ 0.63
UBXN11-213ENST00000472155 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
UBXN11-213ENST00000472155 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
UBXN11-213ENST00000472155 SETD1BQ9UPS6 1966 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms