RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-208ENST00000471913 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
AMPH-208ENST00000471913 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
AMPH-208ENST00000471913 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
AMPH-208ENST00000471913 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
AMPH-208ENST00000471913 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
AMPH-208ENST00000471913 NME9Q86XW9 330 aa15.23■□□□□ 0.03
AMPH-208ENST00000471913 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
AMPH-208ENST00000471913 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
AMPH-208ENST00000471913 COL3A1P02461 1466 aaPredicted RBP15.22■□□□□ 0.03
AMPH-208ENST00000471913 LRRC7Q96NW7 1537 aa15.22■□□□□ 0.03
AMPH-208ENST00000471913 NEUROD2Q15784 382 aa15.22■□□□□ 0.03
AMPH-208ENST00000471913 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
AMPH-208ENST00000471913 ZNF335Q9H4Z2 1342 aaPredicted RBP15.22■□□□□ 0.03
AMPH-208ENST00000471913 RRP7AQ9Y3A4 280 aaKnown RBP15.21■□□□□ 0.03
AMPH-208ENST00000471913 ZKSCAN2Q63HK3 967 aa15.21■□□□□ 0.02
AMPH-208ENST00000471913 C1orf167Q5SNV9 1468 aa15.21■□□□□ 0.02
AMPH-208ENST00000471913 MST1RQ04912 1400 aa15.2■□□□□ 0.02
AMPH-208ENST00000471913 BECN1Q14457 450 aa15.2■□□□□ 0.02
AMPH-208ENST00000471913 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
AMPH-208ENST00000471913 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 ATF3P18847 181 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
AMPH-208ENST00000471913 NFKBIBQ15653 356 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 COG3Q96JB2 828 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
AMPH-208ENST00000471913 OVOS2A0A0J9YW53 1432 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 OVOS2Q6IE36 1432 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 USP31Q70CQ4 1352 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
AMPH-208ENST00000471913 MSH6P52701 1360 aa15.18■□□□□ 0.02
AMPH-208ENST00000471913 ORAI2Q96SN7 254 aa15.18■□□□□ 0.02
AMPH-208ENST00000471913 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
AMPH-208ENST00000471913 KIF1AQ12756 1690 aa15.17■□□□□ 0.02
AMPH-208ENST00000471913 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
AMPH-208ENST00000471913 USP19O94966 1318 aa15.17■□□□□ 0.02
AMPH-208ENST00000471913 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
AMPH-208ENST00000471913 FTSJ3Q8IY81 847 aaKnown RBP15.16■□□□□ 0.02
AMPH-208ENST00000471913 ZNF428Q96B54 188 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 PIK3C2AO00443 1686 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 RLBP1P12271 317 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 GSE1Q14687 1217 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 POLKQ9UBT6 870 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 PCDHB15Q9Y5E8 787 aa15.16■□□□□ 0.02
AMPH-208ENST00000471913 MAP2P11137 1827 aaKnown RBP15.16■□□□□ 0.02
AMPH-208ENST00000471913 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
AMPH-208ENST00000471913 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
AMPH-208ENST00000471913 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
AMPH-208ENST00000471913 PSME1Q06323 249 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
AMPH-208ENST00000471913 IPO8O15397 1037 aaKnown RBP15.13■□□□□ 0.01
AMPH-208ENST00000471913 FCHSD2O94868 740 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 FBLN1P23142 703 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 SMC4Q9NTJ3 1288 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
AMPH-208ENST00000471913 MARF1Q9Y4F3 1742 aaKnown RBP15.13■□□□□ 0.01
AMPH-208ENST00000471913 FOXO3O43524 673 aa15.12■□□□□ 0.01
AMPH-208ENST00000471913 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
AMPH-208ENST00000471913 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
AMPH-208ENST00000471913 SLC4A3P48751 1232 aa15.11■□□□□ 0.01
AMPH-208ENST00000471913 ATF7IPQ6VMQ6 1270 aa15.11■□□□□ 0.01
AMPH-208ENST00000471913 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
AMPH-208ENST00000471913 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
AMPH-208ENST00000471913 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
AMPH-208ENST00000471913 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
AMPH-208ENST00000471913 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
AMPH-208ENST00000471913 NLRP6P59044 892 aa15.1■□□□□ 0.01
AMPH-208ENST00000471913 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
AMPH-208ENST00000471913 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
AMPH-208ENST00000471913 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
AMPH-208ENST00000471913 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
AMPH-208ENST00000471913 LTBP4Q8N2S1 1624 aa15.09■□□□□ 0.01
AMPH-208ENST00000471913 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
AMPH-208ENST00000471913 TRIM27P14373 513 aa15.08■□□□□ 0.01
AMPH-208ENST00000471913 RIPK4P57078 832 aa15.08■□□□□ 0.01
AMPH-208ENST00000471913 RRS1Q15050 365 aaKnown RBP15.08■□□□□ 0
AMPH-208ENST00000471913 SSH1Q8WYL5 1049 aa15.08■□□□□ 0
AMPH-208ENST00000471913 SLAIN2Q9P270 581 aa15.08■□□□□ 0
AMPH-208ENST00000471913 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
AMPH-208ENST00000471913 TNNQ9UQP3 1299 aa15.07■□□□□ 0
AMPH-208ENST00000471913 SMC5Q8IY18 1101 aa15.06■□□□□ 0
AMPH-208ENST00000471913 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
AMPH-208ENST00000471913 SBNO1A3KN83 1393 aa15.06■□□□□ 0
AMPH-208ENST00000471913 ALS2Q96Q42 1657 aa15.06■□□□□ 0
AMPH-208ENST00000471913 PEAK1Q9H792 1746 aa15.06■□□□□ 0
AMPH-208ENST00000471913 SEC24BO95487 1268 aa15.06■□□□□ 0
AMPH-208ENST00000471913 BRINP3Q76B58 766 aa15.06■□□□□ 0
AMPH-208ENST00000471913 IL13P35225 146 aa15.05■□□□□ -0
AMPH-208ENST00000471913 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
AMPH-208ENST00000471913 NUTM2GQ5VZR2 741 aa15.05■□□□□ -0
AMPH-208ENST00000471913 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
AMPH-208ENST00000471913 PXDNQ92626 1479 aa15.04■□□□□ -0
AMPH-208ENST00000471913 ITPRIPQ8IWB1 547 aa15.04■□□□□ -0
AMPH-208ENST00000471913 ARHGAP45Q92619 1136 aa15.04■□□□□ -0
AMPH-208ENST00000471913 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
AMPH-208ENST00000471913 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms