RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
SEMA3A-206ENST00000471474 MPNDQ8N594 471 aa10.1□□□□□ -0.79
SEMA3A-206ENST00000471474 KCTD15Q96SI1 283 aaPredicted RBP10.1□□□□□ -0.79
SEMA3A-206ENST00000471474 C1QTNF2Q9BXJ5 285 aa10.09□□□□□ -0.79
SEMA3A-206ENST00000471474 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
SEMA3A-206ENST00000471474 SOX11P35716 441 aa10.08□□□□□ -0.8
SEMA3A-206ENST00000471474 NNTQ13423 1086 aa10.08□□□□□ -0.8
SEMA3A-206ENST00000471474 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
SEMA3A-206ENST00000471474 SLFNL1Q499Z3 407 aa10.07□□□□□ -0.8
SEMA3A-206ENST00000471474 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
SEMA3A-206ENST00000471474 SMPD1P17405 629 aa10.06□□□□□ -0.8
SEMA3A-206ENST00000471474 IRF5Q13568 498 aa10.06□□□□□ -0.8
SEMA3A-206ENST00000471474 CCDC116Q8IYX3 515 aa10.06□□□□□ -0.8
SEMA3A-206ENST00000471474 A6NJR5 290 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 AXIN1O15169 862 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 OCSTAMPQ9BR26 566 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
SEMA3A-206ENST00000471474 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
SEMA3A-206ENST00000471474 UPP2O95045 317 aa10.03□□□□□ -0.8
SEMA3A-206ENST00000471474 HPS1Q92902 700 aa10.03□□□□□ -0.8
SEMA3A-206ENST00000471474 GIGYF1O75420 1035 aaPredicted RBP10.02□□□□□ -0.81
SEMA3A-206ENST00000471474 CTC1Q2NKJ3 1217 aa10.02□□□□□ -0.81
SEMA3A-206ENST00000471474 SEPT12Q8IYM1 358 aa10.02□□□□□ -0.81
SEMA3A-206ENST00000471474 ZIC2O95409 532 aaPredicted RBP10.01□□□□□ -0.81
SEMA3A-206ENST00000471474 GRM5P41594 1212 aa10.01□□□□□ -0.81
SEMA3A-206ENST00000471474 INTS6LQ5JSJ4 861 aaKnown RBP10□□□□□ -0.81
SEMA3A-206ENST00000471474 TRAF7Q6Q0C0 670 aa10□□□□□ -0.81
SEMA3A-206ENST00000471474 RNF135Q8IUD6 432 aa10□□□□□ -0.81
SEMA3A-206ENST00000471474 CALR3Q96L12 384 aaKnown RBP10□□□□□ -0.81
SEMA3A-206ENST00000471474 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
SEMA3A-206ENST00000471474 MYT1Q01538 1121 aa9.99□□□□□ -0.81
SEMA3A-206ENST00000471474 PPP1R26Q5T8A7 1209 aaPredicted RBP9.99□□□□□ -0.81
SEMA3A-206ENST00000471474 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
SEMA3A-206ENST00000471474 GPR37L1O60883 481 aa9.98□□□□□ -0.81
SEMA3A-206ENST00000471474 MYCP01106 439 aaPredicted RBP9.98□□□□□ -0.81
SEMA3A-206ENST00000471474 HDGFL1Q5TGJ6 251 aa9.98□□□□□ -0.81
SEMA3A-206ENST00000471474 TRAK2O60296 914 aa9.97□□□□□ -0.81
SEMA3A-206ENST00000471474 NR3C2P08235 984 aa9.97□□□□□ -0.81
SEMA3A-206ENST00000471474 SCARF1Q14162 830 aa9.97□□□□□ -0.81
SEMA3A-206ENST00000471474 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SEMA3A-206ENST00000471474 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.82
SEMA3A-206ENST00000471474 AVPP01185 164 aa9.96□□□□□ -0.82
SEMA3A-206ENST00000471474 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
SEMA3A-206ENST00000471474 DOLKQ9UPQ8 538 aa9.96□□□□□ -0.82
SEMA3A-206ENST00000471474 POM121CA8CG34 1229 aa9.95□□□□□ -0.82
SEMA3A-206ENST00000471474 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
SEMA3A-206ENST00000471474 ESPNB1AK53 854 aa9.94□□□□□ -0.82
SEMA3A-206ENST00000471474 GLMNQ92990 594 aa9.94□□□□□ -0.82
SEMA3A-206ENST00000471474 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
SEMA3A-206ENST00000471474 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
SEMA3A-206ENST00000471474 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 SKIP12755 728 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 TIMP2P16035 220 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 USP4Q13107 963 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 OXLD1Q5BKU9 147 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
SEMA3A-206ENST00000471474 MAP7D1Q3KQU3 841 aa9.92□□□□□ -0.82
SEMA3A-206ENST00000471474 FNBP4Q8N3X1 1017 aaPredicted RBP9.92□□□□□ -0.82
SEMA3A-206ENST00000471474 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
SEMA3A-206ENST00000471474 ALG2Q9H553 416 aa9.92□□□□□ -0.82
SEMA3A-206ENST00000471474 BMP2P12643 396 aa9.91□□□□□ -0.82
SEMA3A-206ENST00000471474 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
SEMA3A-206ENST00000471474 CC2D2BQ6DHV5 1058 aa9.91□□□□□ -0.82
SEMA3A-206ENST00000471474 AAASQ9NRG9 546 aa9.91□□□□□ -0.82
SEMA3A-206ENST00000471474 CRIPAKQ8N1N5 446 aa9.9□□□□□ -0.82
SEMA3A-206ENST00000471474 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
SEMA3A-206ENST00000471474 EML3Q32P44 896 aa9.89□□□□□ -0.83
SEMA3A-206ENST00000471474 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
SEMA3A-206ENST00000471474 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
SEMA3A-206ENST00000471474 CCDC97Q96F63 343 aaPredicted RBP9.89□□□□□ -0.83
SEMA3A-206ENST00000471474 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
SEMA3A-206ENST00000471474 RELBQ01201 579 aa9.88□□□□□ -0.83
SEMA3A-206ENST00000471474 CBLBQ13191 982 aa9.88□□□□□ -0.83
SEMA3A-206ENST00000471474 MRPL14Q6P1L8 145 aaKnown RBP9.88□□□□□ -0.83
SEMA3A-206ENST00000471474 CYP2U1Q7Z449 544 aa9.88□□□□□ -0.83
SEMA3A-206ENST00000471474 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
SEMA3A-206ENST00000471474 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
SEMA3A-206ENST00000471474 BMP1P13497 986 aa9.87□□□□□ -0.83
SEMA3A-206ENST00000471474 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
SEMA3A-206ENST00000471474 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 PSME1Q06323 249 aa9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 PURBQ96QR8 312 aaKnown RBP9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 NOD1Q9Y239 953 aa9.86□□□□□ -0.83
SEMA3A-206ENST00000471474 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
SEMA3A-206ENST00000471474 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
SEMA3A-206ENST00000471474 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
SEMA3A-206ENST00000471474 C11orf95C9JLR9 678 aaPredicted RBP9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 ADH1AP07327 375 aa9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 GTF2E1P29083 439 aaPredicted RBP9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 MEIOBQ8N635 442 aa9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 AGBL1Q96MI9 1066 aa9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
SEMA3A-206ENST00000471474 MEN1O00255 615 aa9.83□□□□□ -0.84
SEMA3A-206ENST00000471474 PIK3CDO00329 1044 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms