RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.52
LDHB-206ENST00000470985 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
LDHB-206ENST00000470985 NUDT18Q6ZVK8 323 aa11.77□□□□□ -0.53
LDHB-206ENST00000470985 CLIP1P30622 1438 aa11.77□□□□□ -0.53
LDHB-206ENST00000470985 NKTRP30414 1462 aaKnown RBP11.76□□□□□ -0.53
LDHB-206ENST00000470985 ABCC3O15438 1527 aa11.76□□□□□ -0.53
LDHB-206ENST00000470985 SLIT1O75093 1534 aa11.76□□□□□ -0.53
LDHB-206ENST00000470985 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
LDHB-206ENST00000470985 SMAPO00193 183 aa11.76□□□□□ -0.53
LDHB-206ENST00000470985 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
LDHB-206ENST00000470985 CDHR5Q9HBB8 845 aa11.76□□□□□ -0.53
LDHB-206ENST00000470985 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
LDHB-206ENST00000470985 ATP1B4Q9UN42 357 aaPredicted RBP11.76□□□□□ -0.53
LDHB-206ENST00000470985 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
LDHB-206ENST00000470985 RNF40O75150 1001 aa11.74□□□□□ -0.53
LDHB-206ENST00000470985 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
LDHB-206ENST00000470985 CDK11AQ9UQ88 783 aaPredicted RBP11.74□□□□□ -0.53
LDHB-206ENST00000470985 ATRNO75882 1429 aa11.73□□□□□ -0.53
LDHB-206ENST00000470985 ADAMTS2O95450 1211 aa11.73□□□□□ -0.53
LDHB-206ENST00000470985 KCNC4Q03721 635 aa11.73□□□□□ -0.53
LDHB-206ENST00000470985 SLC26A8Q96RN1 970 aa11.73□□□□□ -0.53
LDHB-206ENST00000470985 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
LDHB-206ENST00000470985 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
LDHB-206ENST00000470985 PADI6Q6TGC4 694 aa11.72□□□□□ -0.53
LDHB-206ENST00000470985 USP21Q9UK80 565 aa11.72□□□□□ -0.53
LDHB-206ENST00000470985 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
LDHB-206ENST00000470985 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
LDHB-206ENST00000470985 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.53
LDHB-206ENST00000470985 RGS20O76081 388 aa11.71□□□□□ -0.53
LDHB-206ENST00000470985 PNPLA6Q8IY17 1366 aa11.7□□□□□ -0.54
LDHB-206ENST00000470985 KIF3BO15066 747 aa11.7□□□□□ -0.54
LDHB-206ENST00000470985 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
LDHB-206ENST00000470985 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
LDHB-206ENST00000470985 SLF2Q8IX21 1173 aa11.69□□□□□ -0.54
LDHB-206ENST00000470985 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
LDHB-206ENST00000470985 FAM198AQ9UFP1 575 aa11.69□□□□□ -0.54
LDHB-206ENST00000470985 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
LDHB-206ENST00000470985 SEMA3EO15041 775 aa11.68□□□□□ -0.54
LDHB-206ENST00000470985 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
LDHB-206ENST00000470985 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
LDHB-206ENST00000470985 TET3O43151 1660 aa11.68□□□□□ -0.54
LDHB-206ENST00000470985 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
LDHB-206ENST00000470985 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
LDHB-206ENST00000470985 GPATCH8Q9UKJ3 1502 aaKnown RBP11.66□□□□□ -0.54
LDHB-206ENST00000470985 FCHSD2O94868 740 aa11.66□□□□□ -0.54
LDHB-206ENST00000470985 PTGDRQ13258 359 aa11.66□□□□□ -0.54
LDHB-206ENST00000470985 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
LDHB-206ENST00000470985 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 CAMTA1Q9Y6Y1 1673 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 A0A0G2JS52 829 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 KIAA1107Q9UPP5 1409 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 LRRIQ1Q96JM4 1722 aa11.65□□□□□ -0.54
LDHB-206ENST00000470985 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.55
LDHB-206ENST00000470985 UNC13BO14795 1591 aa11.64□□□□□ -0.55
LDHB-206ENST00000470985 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
LDHB-206ENST00000470985 DDX17Q92841 729 aaKnown RBP11.64□□□□□ -0.55
LDHB-206ENST00000470985 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
LDHB-206ENST00000470985 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
LDHB-206ENST00000470985 PRR14Q9BWN1 585 aa11.63□□□□□ -0.55
LDHB-206ENST00000470985 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.63□□□□□ -0.55
LDHB-206ENST00000470985 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
LDHB-206ENST00000470985 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
LDHB-206ENST00000470985 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
LDHB-206ENST00000470985 MROH1Q8NDA8 1641 aa11.6□□□□□ -0.55
LDHB-206ENST00000470985 DNAJB2P25686 324 aa11.6□□□□□ -0.55
LDHB-206ENST00000470985 EYA1Q99502 592 aa11.6□□□□□ -0.55
LDHB-206ENST00000470985 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 OATP04181 439 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 ATF3P18847 181 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 GJD4Q96KN9 370 aaPredicted RBP11.59□□□□□ -0.55
LDHB-206ENST00000470985 IL21Q9HBE4 155 aa11.59□□□□□ -0.55
LDHB-206ENST00000470985 PLEKHH2Q8IVE3 1493 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 PIK3C2BO00750 1634 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 BAG6P46379 1132 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 GLI3P10071 1580 aa11.58□□□□□ -0.56
LDHB-206ENST00000470985 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
LDHB-206ENST00000470985 HIC1Q14526 733 aa11.57□□□□□ -0.56
LDHB-206ENST00000470985 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
LDHB-206ENST00000470985 NINLQ9Y2I6 1382 aa11.56□□□□□ -0.56
LDHB-206ENST00000470985 C19orf44Q9H6X5 657 aa11.56□□□□□ -0.56
LDHB-206ENST00000470985 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
LDHB-206ENST00000470985 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
LDHB-206ENST00000470985 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
LDHB-206ENST00000470985 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
LDHB-206ENST00000470985 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
LDHB-206ENST00000470985 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
LDHB-206ENST00000470985 GIGYF1O75420 1035 aaPredicted RBP11.54□□□□□ -0.56
LDHB-206ENST00000470985 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
LDHB-206ENST00000470985 EFCAB6Q5THR3 1501 aa11.54□□□□□ -0.56
LDHB-206ENST00000470985 MST1RQ04912 1400 aa11.53□□□□□ -0.56
LDHB-206ENST00000470985 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
LDHB-206ENST00000470985 MTRQ99707 1265 aa11.53□□□□□ -0.56
LDHB-206ENST00000470985 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
LDHB-206ENST00000470985 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms