RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
SEC16A-208ENST00000467838 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
SEC16A-208ENST00000467838 MRE11P49959 708 aa18.18■□□□□ 0.5
SEC16A-208ENST00000467838 ABCC4O15439 1325 aa18.18■□□□□ 0.5
SEC16A-208ENST00000467838 FER1L4A9Z1Z3 1794 aa18.17■□□□□ 0.5
SEC16A-208ENST00000467838 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
SEC16A-208ENST00000467838 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
SEC16A-208ENST00000467838 STK26Q9P289 416 aa18.17■□□□□ 0.5
SEC16A-208ENST00000467838 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
SEC16A-208ENST00000467838 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
SEC16A-208ENST00000467838 KIF2CQ99661 725 aa18.17■□□□□ 0.5
SEC16A-208ENST00000467838 CALD1Q05682 793 aaKnown RBP18.16■□□□□ 0.5
SEC16A-208ENST00000467838 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
SEC16A-208ENST00000467838 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 RAB3GAP1Q15042 981 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
SEC16A-208ENST00000467838 VAMP4O75379 141 aa18.14■□□□□ 0.49
SEC16A-208ENST00000467838 PTMSP20962 102 aa18.14■□□□□ 0.49
SEC16A-208ENST00000467838 CDK19Q9BWU1 502 aa18.14■□□□□ 0.49
SEC16A-208ENST00000467838 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
SEC16A-208ENST00000467838 DLG5Q8TDM6 1919 aa18.14■□□□□ 0.49
SEC16A-208ENST00000467838 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
SEC16A-208ENST00000467838 TNRQ92752 1358 aa18.13■□□□□ 0.49
SEC16A-208ENST00000467838 KNDC1Q76NI1 1749 aa18.13■□□□□ 0.49
SEC16A-208ENST00000467838 CLCN1P35523 988 aa18.13■□□□□ 0.49
SEC16A-208ENST00000467838 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
SEC16A-208ENST00000467838 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
SEC16A-208ENST00000467838 AATKQ6ZMQ8 1374 aa18.12■□□□□ 0.49
SEC16A-208ENST00000467838 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
SEC16A-208ENST00000467838 C3P01024 1663 aa18.12■□□□□ 0.49
SEC16A-208ENST00000467838 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
SEC16A-208ENST00000467838 GNAI1P63096 354 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 EDC4Q6P2E9 1401 aaKnown RBP18.11■□□□□ 0.49
SEC16A-208ENST00000467838 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 GBP4Q96PP9 640 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
SEC16A-208ENST00000467838 NRKQ7Z2Y5 1582 aa18.1■□□□□ 0.49
SEC16A-208ENST00000467838 CLEC17AQ6ZS10 378 aa18.1■□□□□ 0.49
SEC16A-208ENST00000467838 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
SEC16A-208ENST00000467838 SIRT2Q8IXJ6 389 aa18.1■□□□□ 0.49
SEC16A-208ENST00000467838 HSP90AB1P08238 724 aaKnown RBP18.1■□□□□ 0.49
SEC16A-208ENST00000467838 SKOR2Q2VWA4 1001 aaPredicted RBP18.1■□□□□ 0.49
SEC16A-208ENST00000467838 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
SEC16A-208ENST00000467838 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
SEC16A-208ENST00000467838 K7ELQ4 463 aaPredicted RBP18.08■□□□□ 0.49
SEC16A-208ENST00000467838 IL13P35225 146 aa18.08■□□□□ 0.49
SEC16A-208ENST00000467838 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.49
SEC16A-208ENST00000467838 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.49
SEC16A-208ENST00000467838 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
SEC16A-208ENST00000467838 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
SEC16A-208ENST00000467838 MBIPQ9NS73 344 aa18.07■□□□□ 0.48
SEC16A-208ENST00000467838 CDC45O75419 566 aa18.06■□□□□ 0.48
SEC16A-208ENST00000467838 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
SEC16A-208ENST00000467838 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
SEC16A-208ENST00000467838 API5Q9BZZ5 524 aaKnown RBP18.06■□□□□ 0.48
SEC16A-208ENST00000467838 IBTKQ9P2D0 1353 aaPredicted RBP18.06■□□□□ 0.48
SEC16A-208ENST00000467838 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
SEC16A-208ENST00000467838 AKAP12Q02952 1782 aa18.06■□□□□ 0.48
SEC16A-208ENST00000467838 CFAP44Q96MT7 982 aa18.06■□□□□ 0.48
SEC16A-208ENST00000467838 RIMS1Q86UR5 1692 aaKnown RBP18.05■□□□□ 0.48
SEC16A-208ENST00000467838 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
SEC16A-208ENST00000467838 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
SEC16A-208ENST00000467838 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
SEC16A-208ENST00000467838 UBR1Q8IWV7 1749 aa18.03■□□□□ 0.48
SEC16A-208ENST00000467838 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
SEC16A-208ENST00000467838 UBE2Q2Q8WVN8 375 aa18.03■□□□□ 0.48
SEC16A-208ENST00000467838 ARXQ96QS3 562 aa18.03■□□□□ 0.48
SEC16A-208ENST00000467838 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
SEC16A-208ENST00000467838 ADAMTSL3P82987 1691 aa18.03■□□□□ 0.48
SEC16A-208ENST00000467838 RGS12O14924 1447 aa18.03■□□□□ 0.48
SEC16A-208ENST00000467838 HMOX1P09601 288 aa18.02■□□□□ 0.47
SEC16A-208ENST00000467838 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.47
SEC16A-208ENST00000467838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.47
SEC16A-208ENST00000467838 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.47
SEC16A-208ENST00000467838 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
SEC16A-208ENST00000467838 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
SEC16A-208ENST00000467838 CPS1P31327 1500 aa18.01■□□□□ 0.47
SEC16A-208ENST00000467838 GAS2L3Q86XJ1 694 aa18■□□□□ 0.47
SEC16A-208ENST00000467838 PLEKHM2Q8IWE5 1019 aa18■□□□□ 0.47
SEC16A-208ENST00000467838 RABEP1Q15276 862 aa18■□□□□ 0.47
SEC16A-208ENST00000467838 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
SEC16A-208ENST00000467838 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
SEC16A-208ENST00000467838 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
SEC16A-208ENST00000467838 TECPR2O15040 1411 aa17.99■□□□□ 0.47
SEC16A-208ENST00000467838 FBLN1P23142 703 aa17.99■□□□□ 0.47
SEC16A-208ENST00000467838 ESPNB1AK53 854 aa17.99■□□□□ 0.47
SEC16A-208ENST00000467838 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
SEC16A-208ENST00000467838 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC16A-208ENST00000467838 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
SEC16A-208ENST00000467838 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
SEC16A-208ENST00000467838 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
SEC16A-208ENST00000467838 TMEM2Q9UHN6 1383 aa17.97■□□□□ 0.47
SEC16A-208ENST00000467838 SSFA2P28290 1259 aa17.97■□□□□ 0.47
SEC16A-208ENST00000467838 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
SEC16A-208ENST00000467838 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms