RNA–Protein interactions for RNA: ENST00000467128.5

USP34-208, Transcript of ubiquitin specific peptidase 34, human

TSL 4

Gene USP34, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-208	ENST00000467128	TOPAZ1	Q8N9V7	1692 aa		11.97	□□□□□ -0.49
USP34-208	ENST00000467128	MED1	Q15648	1581 aa	Predicted RBP	11.97	□□□□□ -0.49
USP34-208	ENST00000467128	JCAD	Q9P266	1359 aa		11.97	□□□□□ -0.49
USP34-208	ENST00000467128	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.97	□□□□□ -0.49
USP34-208	ENST00000467128	POGK	Q9P215	609 aa		11.97	□□□□□ -0.49
USP34-208	ENST00000467128	SBNO2	Q9Y2G9	1366 aa		11.96	□□□□□ -0.49
USP34-208	ENST00000467128	GPR153	Q6NV75	609 aa		11.96	□□□□□ -0.49
USP34-208	ENST00000467128	ATP7B	P35670	1465 aa		11.95	□□□□□ -0.5
USP34-208	ENST00000467128	RGPD8	O14715	1765 aa	Predicted RBP	11.95	□□□□□ -0.5
USP34-208	ENST00000467128	NPHP3	Q7Z494	1330 aa		11.95	□□□□□ -0.5
USP34-208	ENST00000467128	NBPF1	Q3BBV0	1214 aa		11.95	□□□□□ -0.5
USP34-208	ENST00000467128	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.95	□□□□□ -0.5
USP34-208	ENST00000467128	PXDN	Q92626	1479 aa		11.95	□□□□□ -0.5
USP34-208	ENST00000467128	SOS2	Q07890	1332 aa	Predicted RBP	11.94	□□□□□ -0.5
USP34-208	ENST00000467128	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.94	□□□□□ -0.5
USP34-208	ENST00000467128	SPATA31A6	Q5VVP1	1343 aa		11.93	□□□□□ -0.5
USP34-208	ENST00000467128	WASL	O00401	505 aa	Predicted RBP	11.93	□□□□□ -0.5
USP34-208	ENST00000467128	NBPF8	Q3BBV2	869 aa		11.93	□□□□□ -0.5
USP34-208	ENST00000467128	MFRP	Q9BY79	579 aa		11.93	□□□□□ -0.5
USP34-208	ENST00000467128	RIMBP2	O15034	1052 aa		11.92	□□□□□ -0.5
USP34-208	ENST00000467128	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
USP34-208	ENST00000467128	ESCO1	Q5FWF5	840 aa		11.91	□□□□□ -0.5
USP34-208	ENST00000467128	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
USP34-208	ENST00000467128	LRRC59	Q96AG4	307 aa	Known RBP	11.91	□□□□□ -0.5
USP34-208	ENST00000467128	ORAI2	Q96SN7	254 aa		11.91	□□□□□ -0.5
USP34-208	ENST00000467128	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.9	□□□□□ -0.5
USP34-208	ENST00000467128	ZSWIM6	Q9HCJ5	1215 aa		11.9	□□□□□ -0.5
USP34-208	ENST00000467128	STK24	Q9Y6E0	443 aa		11.9	□□□□□ -0.5
USP34-208	ENST00000467128	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.89	□□□□□ -0.51
USP34-208	ENST00000467128	NLRP6	P59044	892 aa		11.89	□□□□□ -0.51
USP34-208	ENST00000467128	ARSI	Q5FYB1	569 aa		11.89	□□□□□ -0.51
USP34-208	ENST00000467128	CCER1	Q8TC90	406 aa	Predicted RBP	11.89	□□□□□ -0.51
USP34-208	ENST00000467128	PNPLA6	Q8IY17	1366 aa		11.89	□□□□□ -0.51
USP34-208	ENST00000467128	PRR36	Q9H6K5	1346 aa		11.88	□□□□□ -0.51
USP34-208	ENST00000467128	SLC24A1	O60721	1099 aa		11.88	□□□□□ -0.51
USP34-208	ENST00000467128	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.88	□□□□□ -0.51
USP34-208	ENST00000467128	CARD11	Q9BXL7	1154 aa		11.88	□□□□□ -0.51
USP34-208	ENST00000467128	SBNO1	A3KN83	1393 aa		11.88	□□□□□ -0.51
USP34-208	ENST00000467128	POLR3A	O14802	1390 aa	Predicted RBP	11.88	□□□□□ -0.51
USP34-208	ENST00000467128	ALS2	Q96Q42	1657 aa		11.87	□□□□□ -0.51
USP34-208	ENST00000467128	TNS3	Q68CZ2	1445 aa		11.87	□□□□□ -0.51
USP34-208	ENST00000467128	LRP6	O75581	1613 aa		11.86	□□□□□ -0.51
USP34-208	ENST00000467128	BRD4	O60885	1362 aa	Predicted RBP	11.86	□□□□□ -0.51
USP34-208	ENST00000467128	ABCA3	Q99758	1704 aa		11.86	□□□□□ -0.51
USP34-208	ENST00000467128	MARF1	Q9Y4F3	1742 aa	Known RBP	11.86	□□□□□ -0.51
USP34-208	ENST00000467128	EVC2	Q86UK5	1308 aa		11.86	□□□□□ -0.51
USP34-208	ENST00000467128	ARHGEF10	O15013	1369 aa		11.85	□□□□□ -0.51
USP34-208	ENST00000467128	ATAD2	Q6PL18	1390 aa		11.85	□□□□□ -0.51
USP34-208	ENST00000467128	FOXO3	O43524	673 aa		11.85	□□□□□ -0.51
USP34-208	ENST00000467128	ZNF687	Q8N1G0	1237 aa		11.85	□□□□□ -0.51
USP34-208	ENST00000467128	NUDT16	Q96DE0	195 aa	Known RBP	11.85	□□□□□ -0.51
USP34-208	ENST00000467128	CDK19	Q9BWU1	502 aa		11.85	□□□□□ -0.51
USP34-208	ENST00000467128	DISP3	Q9P2K9	1392 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	NUTM2F	A1L443	756 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	STK25	O00506	426 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	KIF3C	O14782	793 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	PSME1	Q06323	249 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	PUS7	Q96PZ0	661 aa	Known RBP	11.84	□□□□□ -0.51
USP34-208	ENST00000467128	SPATA31A3	Q5VYP0	1347 aa		11.84	□□□□□ -0.51
USP34-208	ENST00000467128	CRYBG1	Q9Y4K1	1723 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	USP47	Q96K76	1375 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	AKAP12	Q02952	1782 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	PLEKHG3	A1L390	1219 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	RGL2	O15211	777 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	ECM2	O94769	699 aa	Predicted RBP	11.83	□□□□□ -0.52
USP34-208	ENST00000467128	DDX17	Q92841	729 aa	Known RBP	11.83	□□□□□ -0.52
USP34-208	ENST00000467128	PPIP5K1	Q6PFW1	1433 aa		11.83	□□□□□ -0.52
USP34-208	ENST00000467128	NINL	Q9Y2I6	1382 aa		11.82	□□□□□ -0.52
USP34-208	ENST00000467128	NRK	Q7Z2Y5	1582 aa		11.82	□□□□□ -0.52
USP34-208	ENST00000467128	MON2	Q7Z3U7	1717 aa		11.81	□□□□□ -0.52
USP34-208	ENST00000467128	C2orf72	A6NCS6	295 aa		11.81	□□□□□ -0.52
USP34-208	ENST00000467128	SRPK2	P78362	688 aa	Known RBP	11.81	□□□□□ -0.52
USP34-208	ENST00000467128	KRT28	Q7Z3Y7	464 aa		11.81	□□□□□ -0.52
USP34-208	ENST00000467128	TESK2	Q96S53	571 aa		11.8	□□□□□ -0.52
USP34-208	ENST00000467128	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.8	□□□□□ -0.52
USP34-208	ENST00000467128	USP6	P35125	1406 aa		11.79	□□□□□ -0.52
USP34-208	ENST00000467128	USP54	Q70EL1	1684 aa		11.79	□□□□□ -0.52
USP34-208	ENST00000467128	NGDN	Q8NEJ9	315 aa	Known RBP	11.79	□□□□□ -0.52
USP34-208	ENST00000467128	PMFBP1	Q8TBY8	1022 aa		11.79	□□□□□ -0.52
USP34-208	ENST00000467128	RNF166	Q96A37	237 aa	Predicted RBP	11.79	□□□□□ -0.52
USP34-208	ENST00000467128	ACE	P12821	1306 aa		11.79	□□□□□ -0.52
USP34-208	ENST00000467128	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.78	□□□□□ -0.52
USP34-208	ENST00000467128	CPSF1	Q10570	1443 aa	Known RBP	11.78	□□□□□ -0.52
USP34-208	ENST00000467128	NWD2	Q9ULI1	1742 aa		11.78	□□□□□ -0.52
USP34-208	ENST00000467128	SSH2	Q76I76	1423 aa		11.77	□□□□□ -0.52
USP34-208	ENST00000467128	ST20-MTHFS	A0A0A6YYL1	179 aa		11.77	□□□□□ -0.53
USP34-208	ENST00000467128	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.77	□□□□□ -0.53
USP34-208	ENST00000467128	XPC	Q01831	940 aa	Predicted RBP	11.77	□□□□□ -0.53
USP34-208	ENST00000467128	TAOK2	Q9UL54	1235 aa		11.76	□□□□□ -0.53
USP34-208	ENST00000467128	PIK3C2A	O00443	1686 aa		11.75	□□□□□ -0.53
USP34-208	ENST00000467128	CDCA8	Q53HL2	280 aa		11.75	□□□□□ -0.53
USP34-208	ENST00000467128	MEX3C	Q5U5Q3	659 aa	Known RBP	11.75	□□□□□ -0.53
USP34-208	ENST00000467128	ZNF772	Q68DY9	489 aa	Predicted RBP	11.75	□□□□□ -0.53
USP34-208	ENST00000467128	CD163L1	Q9NR16	1453 aa		11.75	□□□□□ -0.53
USP34-208	ENST00000467128	PLCH1	Q4KWH8	1693 aa		11.75	□□□□□ -0.53
USP34-208	ENST00000467128	COL14A1	Q05707	1796 aa	Known RBP	11.74	□□□□□ -0.53
USP34-208	ENST00000467128	PPP1R37	O75864	691 aa		11.74	□□□□□ -0.53
USP34-208	ENST00000467128	TMF1	P82094	1093 aa		11.74	□□□□□ -0.53
USP34-208	ENST00000467128	CABP1	Q9NZU7	370 aa		11.74	□□□□□ -0.53
USP34-208	ENST00000467128	RGS17	Q9UGC6	210 aa	Predicted RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms