RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 FLT4P35916 1363 aa15.9■□□□□ 0.14
LAMP3-202ENST00000466939 EIF4A2Q14240 407 aaKnown RBP15.9■□□□□ 0.14
LAMP3-202ENST00000466939 MSH6P52701 1360 aa15.89■□□□□ 0.14
LAMP3-202ENST00000466939 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
LAMP3-202ENST00000466939 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
LAMP3-202ENST00000466939 MST1RQ04912 1400 aa15.89■□□□□ 0.13
LAMP3-202ENST00000466939 FOXO3O43524 673 aa15.88■□□□□ 0.13
LAMP3-202ENST00000466939 RIPK4P57078 832 aa15.88■□□□□ 0.13
LAMP3-202ENST00000466939 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
LAMP3-202ENST00000466939 XPCQ01831 940 aaPredicted RBP15.87■□□□□ 0.13
LAMP3-202ENST00000466939 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
LAMP3-202ENST00000466939 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
LAMP3-202ENST00000466939 NFE2L2Q16236 605 aa15.86■□□□□ 0.13
LAMP3-202ENST00000466939 KIF24Q5T7B8 1368 aa15.85■□□□□ 0.13
LAMP3-202ENST00000466939 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
LAMP3-202ENST00000466939 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
LAMP3-202ENST00000466939 ARHGEF10O15013 1369 aa15.85■□□□□ 0.13
LAMP3-202ENST00000466939 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
LAMP3-202ENST00000466939 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
LAMP3-202ENST00000466939 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
LAMP3-202ENST00000466939 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
LAMP3-202ENST00000466939 KCNH5Q8NCM2 988 aa15.84■□□□□ 0.13
LAMP3-202ENST00000466939 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
LAMP3-202ENST00000466939 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
LAMP3-202ENST00000466939 IL16Q14005 1332 aa15.83■□□□□ 0.12
LAMP3-202ENST00000466939 HOXC9P31274 260 aa15.83■□□□□ 0.12
LAMP3-202ENST00000466939 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
LAMP3-202ENST00000466939 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.83■□□□□ 0.12
LAMP3-202ENST00000466939 RGPD1P0DJD0 1748 aa15.83■□□□□ 0.12
LAMP3-202ENST00000466939 NFAT5O94916 1531 aa15.82■□□□□ 0.12
LAMP3-202ENST00000466939 PLIN1O60240 522 aa15.82■□□□□ 0.12
LAMP3-202ENST00000466939 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
LAMP3-202ENST00000466939 XIRP1Q702N8 1843 aaKnown RBP15.81■□□□□ 0.12
LAMP3-202ENST00000466939 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
LAMP3-202ENST00000466939 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
LAMP3-202ENST00000466939 CALD1Q05682 793 aaKnown RBP15.8■□□□□ 0.12
LAMP3-202ENST00000466939 SLIT3O75094 1523 aa15.8■□□□□ 0.12
LAMP3-202ENST00000466939 LTN1O94822 1766 aa15.8■□□□□ 0.12
LAMP3-202ENST00000466939 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
LAMP3-202ENST00000466939 NPHP3Q7Z494 1330 aa15.79■□□□□ 0.12
LAMP3-202ENST00000466939 B4GALNT3Q6L9W6 998 aa15.78■□□□□ 0.12
LAMP3-202ENST00000466939 TSR2Q969E8 191 aaKnown RBP15.78■□□□□ 0.12
LAMP3-202ENST00000466939 LTV1Q96GA3 475 aaPredicted RBP15.78■□□□□ 0.12
LAMP3-202ENST00000466939 USP19O94966 1318 aa15.78■□□□□ 0.12
LAMP3-202ENST00000466939 IGSF1Q8N6C5 1336 aa15.78■□□□□ 0.12
LAMP3-202ENST00000466939 EXOC6Q8TAG9 804 aa15.78■□□□□ 0.12
LAMP3-202ENST00000466939 EYA1Q99502 592 aa15.78■□□□□ 0.12
LAMP3-202ENST00000466939 IP6K1Q92551 441 aa15.77■□□□□ 0.11
LAMP3-202ENST00000466939 ALS2Q96Q42 1657 aa15.77■□□□□ 0.11
LAMP3-202ENST00000466939 BCAR3O75815 825 aa15.76■□□□□ 0.11
LAMP3-202ENST00000466939 GCP02774 474 aa15.76■□□□□ 0.11
LAMP3-202ENST00000466939 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
LAMP3-202ENST00000466939 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
LAMP3-202ENST00000466939 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
LAMP3-202ENST00000466939 CRBNQ96SW2 442 aa15.76■□□□□ 0.11
LAMP3-202ENST00000466939 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
LAMP3-202ENST00000466939 KDRP35968 1356 aa15.75■□□□□ 0.11
LAMP3-202ENST00000466939 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
LAMP3-202ENST00000466939 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
LAMP3-202ENST00000466939 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
LAMP3-202ENST00000466939 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
LAMP3-202ENST00000466939 PXDNQ92626 1479 aa15.74■□□□□ 0.11
LAMP3-202ENST00000466939 PHRF1Q9P1Y6 1649 aaKnown RBP15.73■□□□□ 0.11
LAMP3-202ENST00000466939 DLG5Q8TDM6 1919 aa15.73■□□□□ 0.11
LAMP3-202ENST00000466939 RARSP54136 660 aaKnown RBP15.73■□□□□ 0.11
LAMP3-202ENST00000466939 GNAI1P63096 354 aa15.73■□□□□ 0.11
LAMP3-202ENST00000466939 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
LAMP3-202ENST00000466939 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
LAMP3-202ENST00000466939 BRINP3Q76B58 766 aa15.72■□□□□ 0.11
LAMP3-202ENST00000466939 ARHGEF25Q86VW2 580 aa15.72■□□□□ 0.11
LAMP3-202ENST00000466939 MED1Q15648 1581 aaPredicted RBP15.72■□□□□ 0.11
LAMP3-202ENST00000466939 FAM83GA6ND36 823 aa15.71■□□□□ 0.11
LAMP3-202ENST00000466939 GAS2L2Q8NHY3 880 aa15.71■□□□□ 0.11
LAMP3-202ENST00000466939 SLAIN2Q9P270 581 aa15.71■□□□□ 0.11
LAMP3-202ENST00000466939 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
LAMP3-202ENST00000466939 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
LAMP3-202ENST00000466939 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
LAMP3-202ENST00000466939 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
LAMP3-202ENST00000466939 SPATA31A3Q5VYP0 1347 aa15.7■□□□□ 0.1
LAMP3-202ENST00000466939 MTHFSDQ2M296 383 aaKnown RBP15.69■□□□□ 0.1
LAMP3-202ENST00000466939 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
LAMP3-202ENST00000466939 ZNF853P0CG23 659 aa15.68■□□□□ 0.1
LAMP3-202ENST00000466939 ZC3H6P61129 1189 aaKnown RBP15.68■□□□□ 0.1
LAMP3-202ENST00000466939 MCM10Q7L590 875 aa15.68■□□□□ 0.1
LAMP3-202ENST00000466939 ANKRD24Q8TF21 1146 aa15.68■□□□□ 0.1
LAMP3-202ENST00000466939 CFAP44Q96MT7 982 aa15.68■□□□□ 0.1
LAMP3-202ENST00000466939 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
LAMP3-202ENST00000466939 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
LAMP3-202ENST00000466939 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
LAMP3-202ENST00000466939 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
LAMP3-202ENST00000466939 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
LAMP3-202ENST00000466939 LRRC59Q96AG4 307 aaKnown RBP15.65■□□□□ 0.1
LAMP3-202ENST00000466939 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
LAMP3-202ENST00000466939 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
LAMP3-202ENST00000466939 CABLES1Q8TDN4 633 aa15.65■□□□□ 0.1
LAMP3-202ENST00000466939 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
LAMP3-202ENST00000466939 SOS2Q07890 1332 aaPredicted RBP15.64■□□□□ 0.09
LAMP3-202ENST00000466939 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
LAMP3-202ENST00000466939 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
LAMP3-202ENST00000466939 GNAT3A8MTJ3 354 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms