RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 FAM187AA6NFU0 413 aa8.46□□□□□ -1.06
EDEM3-205ENST00000466606 ARID3CA6NKF2 412 aa8.46□□□□□ -1.06
EDEM3-205ENST00000466606 ADH1CP00326 375 aa8.46□□□□□ -1.06
EDEM3-205ENST00000466606 IRX2Q9BZI1 471 aaPredicted RBP8.46□□□□□ -1.06
EDEM3-205ENST00000466606 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
EDEM3-205ENST00000466606 NRG2O14511 850 aaPredicted RBP8.44□□□□□ -1.06
EDEM3-205ENST00000466606 NR3C2P08235 984 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 NNTQ13423 1086 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 MPNDQ8N594 471 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 HPS1Q92902 700 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 ALG2Q9H553 416 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 MAP4K5Q9Y4K4 846 aa8.44□□□□□ -1.06
EDEM3-205ENST00000466606 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
EDEM3-205ENST00000466606 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
EDEM3-205ENST00000466606 GLMNQ92990 594 aa8.43□□□□□ -1.06
EDEM3-205ENST00000466606 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
EDEM3-205ENST00000466606 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
EDEM3-205ENST00000466606 CDV3Q9UKY7 258 aaKnown RBP8.42□□□□□ -1.06
EDEM3-205ENST00000466606 ESPNB1AK53 854 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 SOX11P35716 441 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 NR5A1Q13285 461 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 PKDCCQ504Y2 493 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
EDEM3-205ENST00000466606 TMPRSS4Q9NRS4 437 aa8.41□□□□□ -1.06
EDEM3-205ENST00000466606 MCCD1P59942 119 aaPredicted RBP8.4□□□□□ -1.06
EDEM3-205ENST00000466606 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
EDEM3-205ENST00000466606 ERVH48-1M5A8F1 160 aa8.39□□□□□ -1.07
EDEM3-205ENST00000466606 SLFNL1Q499Z3 407 aa8.39□□□□□ -1.07
EDEM3-205ENST00000466606 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
EDEM3-205ENST00000466606 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
EDEM3-205ENST00000466606 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
EDEM3-205ENST00000466606 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
EDEM3-205ENST00000466606 RNF135Q8IUD6 432 aa8.38□□□□□ -1.07
EDEM3-205ENST00000466606 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
EDEM3-205ENST00000466606 UCN2Q96RP3 112 aa8.38□□□□□ -1.07
EDEM3-205ENST00000466606 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
EDEM3-205ENST00000466606 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
EDEM3-205ENST00000466606 DGAT1O75907 488 aa8.37□□□□□ -1.07
EDEM3-205ENST00000466606 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
EDEM3-205ENST00000466606 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
EDEM3-205ENST00000466606 PHTF2Q8N3S3 785 aa8.37□□□□□ -1.07
EDEM3-205ENST00000466606 ITPKCQ96DU7 683 aa8.37□□□□□ -1.07
EDEM3-205ENST00000466606 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
EDEM3-205ENST00000466606 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
EDEM3-205ENST00000466606 SKIP12755 728 aa8.36□□□□□ -1.07
EDEM3-205ENST00000466606 Q6ZNB5 142 aa8.36□□□□□ -1.07
EDEM3-205ENST00000466606 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
EDEM3-205ENST00000466606 ST8SIA5O15466 376 aa8.35□□□□□ -1.07
EDEM3-205ENST00000466606 TIMP2P16035 220 aa8.35□□□□□ -1.07
EDEM3-205ENST00000466606 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
EDEM3-205ENST00000466606 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
EDEM3-205ENST00000466606 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
EDEM3-205ENST00000466606 SEPT12Q8IYM1 358 aa8.35□□□□□ -1.07
EDEM3-205ENST00000466606 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
EDEM3-205ENST00000466606 KLF16Q9BXK1 252 aaPredicted RBP8.35□□□□□ -1.07
EDEM3-205ENST00000466606 CAPN5O15484 640 aaPredicted RBP8.34□□□□□ -1.07
EDEM3-205ENST00000466606 MYT1Q01538 1121 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 CBLBQ13191 982 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 OXLD1Q5BKU9 147 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 DEPDC4Q8N2C3 294 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 DOLKQ9UPQ8 538 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
EDEM3-205ENST00000466606 AVPP01185 164 aa8.33□□□□□ -1.08
EDEM3-205ENST00000466606 SCTRP47872 440 aa8.33□□□□□ -1.08
EDEM3-205ENST00000466606 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
EDEM3-205ENST00000466606 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
EDEM3-205ENST00000466606 ADD1P35611 737 aaKnown RBP8.32□□□□□ -1.08
EDEM3-205ENST00000466606 PALM3A6NDB9 673 aaPredicted RBP8.31□□□□□ -1.08
EDEM3-205ENST00000466606 LCE2BO14633 110 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 AXIN1O15169 862 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 LILRA1O75019 489 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 TRAF7Q6Q0C0 670 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 DACH1Q9UI36 760 aa8.31□□□□□ -1.08
EDEM3-205ENST00000466606 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
EDEM3-205ENST00000466606 ATP9BO43861 1147 aa8.3□□□□□ -1.08
EDEM3-205ENST00000466606 BMP1P13497 986 aa8.3□□□□□ -1.08
EDEM3-205ENST00000466606 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
EDEM3-205ENST00000466606 AGBL1Q96MI9 1066 aa8.3□□□□□ -1.08
EDEM3-205ENST00000466606 RFX1P22670 979 aa8.29□□□□□ -1.08
EDEM3-205ENST00000466606 NCOA4Q13772 614 aa8.29□□□□□ -1.08
EDEM3-205ENST00000466606 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
EDEM3-205ENST00000466606 ARID3AQ99856 593 aa8.29□□□□□ -1.08
EDEM3-205ENST00000466606 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
EDEM3-205ENST00000466606 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 LMOD1P29536 600 aaPredicted RBP8.28□□□□□ -1.08
EDEM3-205ENST00000466606 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 MAP7D1Q3KQU3 841 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
EDEM3-205ENST00000466606 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
EDEM3-205ENST00000466606 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
EDEM3-205ENST00000466606 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms