RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 QRICH2Q9H0J4 1663 aa11.19□□□□□ -0.62
UBE4B-205ENST00000465408 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
UBE4B-205ENST00000465408 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
UBE4B-205ENST00000465408 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
UBE4B-205ENST00000465408 ADCY9O60503 1353 aa11.17□□□□□ -0.62
UBE4B-205ENST00000465408 KIF3CO14782 793 aa11.17□□□□□ -0.62
UBE4B-205ENST00000465408 HTRA3P83110 453 aa11.17□□□□□ -0.62
UBE4B-205ENST00000465408 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
UBE4B-205ENST00000465408 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-205ENST00000465408 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
UBE4B-205ENST00000465408 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
UBE4B-205ENST00000465408 RGPD3A6NKT7 1758 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-205ENST00000465408 RGPD4Q7Z3J3 1758 aa11.16□□□□□ -0.62
UBE4B-205ENST00000465408 YBX3P16989 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBE4B-205ENST00000465408 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBE4B-205ENST00000465408 BCL11BQ9C0K0 894 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-205ENST00000465408 TNS3Q68CZ2 1445 aa11.16□□□□□ -0.62
UBE4B-205ENST00000465408 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.62
UBE4B-205ENST00000465408 TULP4Q9NRJ4 1543 aa11.15□□□□□ -0.62
UBE4B-205ENST00000465408 FKBP8Q14318 412 aa11.15□□□□□ -0.62
UBE4B-205ENST00000465408 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
UBE4B-205ENST00000465408 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
UBE4B-205ENST00000465408 NEFLP07196 543 aa11.14□□□□□ -0.63
UBE4B-205ENST00000465408 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
UBE4B-205ENST00000465408 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
UBE4B-205ENST00000465408 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
UBE4B-205ENST00000465408 YTHDC2Q9H6S0 1430 aaKnown RBP11.14□□□□□ -0.63
UBE4B-205ENST00000465408 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
UBE4B-205ENST00000465408 SPATA31A1Q5TZJ5 1347 aa11.13□□□□□ -0.63
UBE4B-205ENST00000465408 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
UBE4B-205ENST00000465408 PROM2Q8N271 834 aa11.13□□□□□ -0.63
UBE4B-205ENST00000465408 NLGN2Q8NFZ4 835 aa11.13□□□□□ -0.63
UBE4B-205ENST00000465408 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
UBE4B-205ENST00000465408 NSD3Q9BZ95 1437 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 PRAM1Q96QH2 718 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 SLC12A5Q9H2X9 1139 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
UBE4B-205ENST00000465408 PLSCR1O15162 318 aa11.11□□□□□ -0.63
UBE4B-205ENST00000465408 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
UBE4B-205ENST00000465408 POGKQ9P215 609 aa11.11□□□□□ -0.63
UBE4B-205ENST00000465408 NPC1L1Q9UHC9 1359 aa11.11□□□□□ -0.63
UBE4B-205ENST00000465408 SLC15A2Q16348 729 aa11.1□□□□□ -0.63
UBE4B-205ENST00000465408 STK32BQ9NY57 414 aa11.1□□□□□ -0.63
UBE4B-205ENST00000465408 TECPR2O15040 1411 aa11.09□□□□□ -0.63
UBE4B-205ENST00000465408 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
UBE4B-205ENST00000465408 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
UBE4B-205ENST00000465408 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
UBE4B-205ENST00000465408 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
UBE4B-205ENST00000465408 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
UBE4B-205ENST00000465408 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
UBE4B-205ENST00000465408 IRX6P78412 446 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-205ENST00000465408 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
UBE4B-205ENST00000465408 SMG6Q86US8 1419 aaKnown RBP11.08□□□□□ -0.64
UBE4B-205ENST00000465408 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
UBE4B-205ENST00000465408 WAPLQ7Z5K2 1190 aa11.07□□□□□ -0.64
UBE4B-205ENST00000465408 PUS7Q96PZ0 661 aaKnown RBP11.07□□□□□ -0.64
UBE4B-205ENST00000465408 ARHGEF10O15013 1369 aa11.06□□□□□ -0.64
UBE4B-205ENST00000465408 TOMM70O94826 608 aa11.06□□□□□ -0.64
UBE4B-205ENST00000465408 WDR43Q15061 677 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBE4B-205ENST00000465408 USP35Q9P2H5 1018 aa11.06□□□□□ -0.64
UBE4B-205ENST00000465408 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
UBE4B-205ENST00000465408 ANKRD36BQ8N2N9 1353 aa11.05□□□□□ -0.64
UBE4B-205ENST00000465408 MORC1Q86VD1 984 aa11.05□□□□□ -0.64
UBE4B-205ENST00000465408 CDK19Q9BWU1 502 aa11.05□□□□□ -0.64
UBE4B-205ENST00000465408 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
UBE4B-205ENST00000465408 ABCC11Q96J66 1382 aa11.04□□□□□ -0.64
UBE4B-205ENST00000465408 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
UBE4B-205ENST00000465408 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-205ENST00000465408 PSME1Q06323 249 aa11.04□□□□□ -0.64
UBE4B-205ENST00000465408 ADAMTS8Q9UP79 889 aa11.04□□□□□ -0.64
UBE4B-205ENST00000465408 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 INSRP06213 1382 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 SBF2Q86WG5 1849 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 STRN4Q9NRL3 753 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
UBE4B-205ENST00000465408 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
UBE4B-205ENST00000465408 ADRA2BP18089 450 aa11.01□□□□□ -0.65
UBE4B-205ENST00000465408 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
UBE4B-205ENST00000465408 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
UBE4B-205ENST00000465408 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
UBE4B-205ENST00000465408 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
UBE4B-205ENST00000465408 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
UBE4B-205ENST00000465408 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
UBE4B-205ENST00000465408 PRDM11Q9NQV5 511 aa11□□□□□ -0.65
UBE4B-205ENST00000465408 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
UBE4B-205ENST00000465408 CABP1Q9NZU7 370 aa11□□□□□ -0.65
UBE4B-205ENST00000465408 MLLT1Q03111 559 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-205ENST00000465408 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-205ENST00000465408 CDCA7LQ96GN5 454 aa10.99□□□□□ -0.65
UBE4B-205ENST00000465408 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
UBE4B-205ENST00000465408 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
UBE4B-205ENST00000465408 NSD2O96028 1365 aa10.99□□□□□ -0.65
UBE4B-205ENST00000465408 TOPAZ1Q8N9V7 1692 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 KNDC1Q76NI1 1749 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 WASLO00401 505 aaPredicted RBP10.98□□□□□ -0.65
UBE4B-205ENST00000465408 POLD1P28340 1107 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms