RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CALD1Q05682 793 aaKnown RBP28.05■■■□□ 2.08
PDLIM2-216ENST00000464275 MAP3K19Q56UN5 1328 aa28.05■■■□□ 2.08
PDLIM2-216ENST00000464275 EXOSC9Q06265 439 aaKnown RBP28.04■■■□□ 2.08
PDLIM2-216ENST00000464275 FLT4P35916 1363 aa28.04■■■□□ 2.08
PDLIM2-216ENST00000464275 NLRP6P59044 892 aa28.04■■■□□ 2.08
PDLIM2-216ENST00000464275 LMOD3Q0VAK6 560 aa28.04■■■□□ 2.08
PDLIM2-216ENST00000464275 ERICH6Q7L0X2 663 aa28.04■■■□□ 2.08
PDLIM2-216ENST00000464275 HSP90AB2PQ58FF8 381 aa28.03■■■□□ 2.08
PDLIM2-216ENST00000464275 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
PDLIM2-216ENST00000464275 SOX12O15370 315 aa28.02■■■□□ 2.08
PDLIM2-216ENST00000464275 FRAT1Q92837 279 aaPredicted RBP28■■■□□ 2.07
PDLIM2-216ENST00000464275 KIF24Q5T7B8 1368 aa28■■■□□ 2.07
PDLIM2-216ENST00000464275 LTN1O94822 1766 aa28■■■□□ 2.07
PDLIM2-216ENST00000464275 SULT6B1Q6IMI4 303 aa28■■■□□ 2.07
PDLIM2-216ENST00000464275 ARHGEF10O15013 1369 aa28■■■□□ 2.07
PDLIM2-216ENST00000464275 C14orf37Q86TY3 774 aa27.99■■■□□ 2.07
PDLIM2-216ENST00000464275 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
PDLIM2-216ENST00000464275 AMPHP49418 695 aa27.97■■■□□ 2.07
PDLIM2-216ENST00000464275 KDM2BQ8NHM5 1336 aa27.97■■■□□ 2.07
PDLIM2-216ENST00000464275 PAK3O75914 559 aaPredicted RBP27.97■■■□□ 2.07
PDLIM2-216ENST00000464275 GNAI1P63096 354 aa27.96■■■□□ 2.07
PDLIM2-216ENST00000464275 ESCO1Q5FWF5 840 aa27.96■■■□□ 2.07
PDLIM2-216ENST00000464275 CENPQQ7L2Z9 268 aaPredicted RBP27.96■■■□□ 2.07
PDLIM2-216ENST00000464275 AEBP1Q8IUX7 1158 aa27.96■■■□□ 2.07
PDLIM2-216ENST00000464275 PROSER2Q86WR7 435 aaPredicted RBP27.95■■■□□ 2.07
PDLIM2-216ENST00000464275 PANK1Q8TE04 598 aa27.95■■■□□ 2.07
PDLIM2-216ENST00000464275 BCL2L13Q9BXK5 485 aa27.95■■■□□ 2.07
PDLIM2-216ENST00000464275 IFT57Q9NWB7 429 aa27.95■■■□□ 2.07
PDLIM2-216ENST00000464275 KIF1AQ12756 1690 aa27.95■■■□□ 2.06
PDLIM2-216ENST00000464275 AAMPQ13685 434 aa27.93■■■□□ 2.06
PDLIM2-216ENST00000464275 TCERG1O14776 1098 aaKnown RBP27.93■■■□□ 2.06
PDLIM2-216ENST00000464275 NUTM2GQ5VZR2 741 aa27.93■■■□□ 2.06
PDLIM2-216ENST00000464275 STRCP1A6NGW2 1772 aa27.93■■■□□ 2.06
PDLIM2-216ENST00000464275 ZNF853P0CG23 659 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 MS4A1P11836 297 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 PSME1Q06323 249 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 ZKSCAN2Q63HK3 967 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 SMC4Q9NTJ3 1288 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 COG6Q9Y2V7 657 aa27.92■■■□□ 2.06
PDLIM2-216ENST00000464275 LAS1LQ9Y4W2 734 aaKnown RBP27.91■■■□□ 2.06
PDLIM2-216ENST00000464275 ZNF428Q96B54 188 aa27.91■■■□□ 2.06
PDLIM2-216ENST00000464275 THUMPD2Q9BTF0 503 aaKnown RBP27.91■■■□□ 2.06
PDLIM2-216ENST00000464275 KDRP35968 1356 aa27.9■■■□□ 2.06
PDLIM2-216ENST00000464275 ALDH1L2Q3SY69 923 aa27.9■■■□□ 2.06
PDLIM2-216ENST00000464275 SSH1Q8WYL5 1049 aa27.9■■■□□ 2.06
PDLIM2-216ENST00000464275 RTL1A6NKG5 1358 aa27.89■■■□□ 2.06
PDLIM2-216ENST00000464275 IGSF1Q8N6C5 1336 aa27.89■■■□□ 2.05
PDLIM2-216ENST00000464275 NFAT5O94916 1531 aa27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 HOXC9P31274 260 aa27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 CLUAP1Q96AJ1 413 aa27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 CFAP44Q96MT7 982 aa27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 TRPM3Q9HCF6 1732 aaPredicted RBP27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 PHRF1Q9P1Y6 1649 aaKnown RBP27.88■■■□□ 2.05
PDLIM2-216ENST00000464275 RLBP1P12271 317 aa27.86■■■□□ 2.05
PDLIM2-216ENST00000464275 EYA1Q99502 592 aa27.86■■■□□ 2.05
PDLIM2-216ENST00000464275 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
PDLIM2-216ENST00000464275 TNNQ9UQP3 1299 aa27.86■■■□□ 2.05
PDLIM2-216ENST00000464275 ANP32AP39687 249 aaKnown RBP27.85■■■□□ 2.05
PDLIM2-216ENST00000464275 DZIP1LQ8IYY4 767 aaKnown RBP27.85■■■□□ 2.05
PDLIM2-216ENST00000464275 ORAI2Q96SN7 254 aa27.85■■■□□ 2.05
PDLIM2-216ENST00000464275 MBIPQ9NS73 344 aa27.85■■■□□ 2.05
PDLIM2-216ENST00000464275 FAM83GA6ND36 823 aa27.84■■■□□ 2.05
PDLIM2-216ENST00000464275 KIF16BQ96L93 1317 aa27.84■■■□□ 2.05
PDLIM2-216ENST00000464275 NCOA3Q9Y6Q9 1424 aa27.84■■■□□ 2.05
PDLIM2-216ENST00000464275 C1orf167Q5SNV9 1468 aa27.83■■■□□ 2.05
PDLIM2-216ENST00000464275 BRPF1P55201 1214 aaPredicted RBP27.82■■■□□ 2.04
PDLIM2-216ENST00000464275 KCNH5Q8NCM2 988 aa27.82■■■□□ 2.04
PDLIM2-216ENST00000464275 MVPQ14764 893 aaKnown RBP27.82■■■□□ 2.04
PDLIM2-216ENST00000464275 FTSJ3Q8IY81 847 aaKnown RBP27.82■■■□□ 2.04
PDLIM2-216ENST00000464275 IPO8O15397 1037 aaKnown RBP27.81■■■□□ 2.04
PDLIM2-216ENST00000464275 VAMP4O75379 141 aa27.81■■■□□ 2.04
PDLIM2-216ENST00000464275 ATF7IPQ6VMQ6 1270 aa27.81■■■□□ 2.04
PDLIM2-216ENST00000464275 DCTN1Q14203 1278 aa27.8■■■□□ 2.04
PDLIM2-216ENST00000464275 NOP58Q9Y2X3 529 aaKnown RBP27.8■■■□□ 2.04
PDLIM2-216ENST00000464275 SLIT3O75094 1523 aa27.8■■■□□ 2.04
PDLIM2-216ENST00000464275 NOB1Q9ULX3 412 aaKnown RBP27.8■■■□□ 2.04
PDLIM2-216ENST00000464275 DCCP43146 1447 aa27.79■■■□□ 2.04
PDLIM2-216ENST00000464275 FOXO3O43524 673 aa27.79■■■□□ 2.04
PDLIM2-216ENST00000464275 TRIM27P14373 513 aa27.79■■■□□ 2.04
PDLIM2-216ENST00000464275 IP6K1Q92551 441 aa27.78■■■□□ 2.04
PDLIM2-216ENST00000464275 TMEM94Q12767 1356 aa27.77■■■□□ 2.04
PDLIM2-216ENST00000464275 MTHFSDQ2M296 383 aaKnown RBP27.77■■■□□ 2.04
PDLIM2-216ENST00000464275 GAS2L2Q8NHY3 880 aa27.77■■■□□ 2.04
PDLIM2-216ENST00000464275 ALS2Q96Q42 1657 aa27.76■■■□□ 2.03
PDLIM2-216ENST00000464275 RGPD2P0DJD1 1756 aa27.75■■■□□ 2.03
PDLIM2-216ENST00000464275 TWISTNBQ3B726 338 aaPredicted RBP27.75■■■□□ 2.03
PDLIM2-216ENST00000464275 TSPYL6Q8N831 410 aa27.75■■■□□ 2.03
PDLIM2-216ENST00000464275 IPO9Q96P70 1041 aaKnown RBP27.75■■■□□ 2.03
PDLIM2-216ENST00000464275 MST1RQ04912 1400 aa27.75■■■□□ 2.03
PDLIM2-216ENST00000464275 XIRP1Q702N8 1843 aaKnown RBP27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 CHL1O00533 1208 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 IGHDP01880 384 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 ATF3P18847 181 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 KRT28Q7Z3Y7 464 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 CRB1P82279 1406 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 STRCQ7RTU9 1775 aa27.74■■■□□ 2.03
PDLIM2-216ENST00000464275 MCM10Q7L590 875 aa27.73■■■□□ 2.03
PDLIM2-216ENST00000464275 MRPL50Q8N5N7 158 aaKnown RBP27.73■■■□□ 2.03
PDLIM2-216ENST00000464275 LRRC37A3O60309 1634 aa27.73■■■□□ 2.03
PDLIM2-216ENST00000464275 HSPA2P54652 639 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms