RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 DHX29Q7Z478 1369 aaKnown RBP16.12■□□□□ 0.17
CHRNA4-202ENST00000463705 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
CHRNA4-202ENST00000463705 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-202ENST00000463705 NEK4P51957 841 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 PCMTD1Q96MG8 357 aaPredicted RBP16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 CNNM1Q9NRU3 951 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 BTBD11A6QL63 1104 aa16.11■□□□□ 0.17
CHRNA4-202ENST00000463705 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
CHRNA4-202ENST00000463705 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
CHRNA4-202ENST00000463705 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
CHRNA4-202ENST00000463705 MRE11P49959 708 aa16.1■□□□□ 0.17
CHRNA4-202ENST00000463705 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 GPS2Q13227 327 aa16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 OLFM4Q6UX06 510 aa16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 AEBP1Q8IUX7 1158 aa16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
CHRNA4-202ENST00000463705 CYP46A1Q9Y6A2 500 aa16.08■□□□□ 0.16
CHRNA4-202ENST00000463705 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.16
CHRNA4-202ENST00000463705 IDI1Q13907 227 aa16.08■□□□□ 0.16
CHRNA4-202ENST00000463705 FYB1O15117 783 aa16.07■□□□□ 0.16
CHRNA4-202ENST00000463705 CCDC43Q96MW1 224 aaKnown RBP16.07■□□□□ 0.16
CHRNA4-202ENST00000463705 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
CHRNA4-202ENST00000463705 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.07■□□□□ 0.16
CHRNA4-202ENST00000463705 NOS1P29475 1434 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 TRAK2O60296 914 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 FOSBP53539 338 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 NACAP1Q9BZK3 213 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 CCDC39Q9UFE4 941 aa16.06■□□□□ 0.16
CHRNA4-202ENST00000463705 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 RARSP54136 660 aaKnown RBP16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 KDM5BQ9UGL1 1544 aa16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 NUP160Q12769 1436 aa16.05■□□□□ 0.16
CHRNA4-202ENST00000463705 PLCH2O75038 1416 aa16.04■□□□□ 0.16
CHRNA4-202ENST00000463705 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
CHRNA4-202ENST00000463705 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
CHRNA4-202ENST00000463705 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
CHRNA4-202ENST00000463705 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 RAB11FIP3O75154 756 aa16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
CHRNA4-202ENST00000463705 MYL6BP14649 208 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 NASPP49321 788 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 AACSQ86V21 672 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 NME9Q86XW9 330 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 JMYQ8N9B5 988 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 DISP3Q9P2K9 1392 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 SSH1Q8WYL5 1049 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 ZNF592Q92610 1267 aa16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
CHRNA4-202ENST00000463705 KRT32Q14532 448 aa16.02■□□□□ 0.15
CHRNA4-202ENST00000463705 DUSP27Q5VZP5 1158 aa16.02■□□□□ 0.15
CHRNA4-202ENST00000463705 CTNNA3Q9UI47 895 aa16.02■□□□□ 0.15
CHRNA4-202ENST00000463705 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.15
CHRNA4-202ENST00000463705 MAPKBP1O60336 1514 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 ATP10BO94823 1461 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 RALGAPBQ86X10 1494 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 TXLNAP40222 546 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 MCM10Q7L590 875 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 SIL1Q9H173 461 aa16.01■□□□□ 0.15
CHRNA4-202ENST00000463705 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
CHRNA4-202ENST00000463705 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
CHRNA4-202ENST00000463705 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
CHRNA4-202ENST00000463705 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
CHRNA4-202ENST00000463705 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
CHRNA4-202ENST00000463705 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
CHRNA4-202ENST00000463705 STARD3NLO95772 234 aa16■□□□□ 0.15
CHRNA4-202ENST00000463705 CAVIN1Q6NZI2 390 aaKnown RBP16■□□□□ 0.15
CHRNA4-202ENST00000463705 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
CHRNA4-202ENST00000463705 NUP153P49790 1475 aaKnown RBP15.99■□□□□ 0.15
CHRNA4-202ENST00000463705 PRPF40AO75400 957 aaKnown RBP15.99■□□□□ 0.15
CHRNA4-202ENST00000463705 TRIM22Q8IYM9 498 aa15.99■□□□□ 0.15
CHRNA4-202ENST00000463705 AMOTL2Q9Y2J4 779 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms