RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NLRP6P59044 892 aa16.59■□□□□ 0.25
VAPB-203ENST00000463370 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
VAPB-203ENST00000463370 NEFMP07197 916 aa16.58■□□□□ 0.25
VAPB-203ENST00000463370 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.25
VAPB-203ENST00000463370 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.25
VAPB-203ENST00000463370 RLBP1P12271 317 aa16.58■□□□□ 0.24
VAPB-203ENST00000463370 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
VAPB-203ENST00000463370 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
VAPB-203ENST00000463370 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
VAPB-203ENST00000463370 KDM2BQ8NHM5 1336 aa16.57■□□□□ 0.24
VAPB-203ENST00000463370 FAM83GA6ND36 823 aa16.57■□□□□ 0.24
VAPB-203ENST00000463370 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
VAPB-203ENST00000463370 ESCO1Q5FWF5 840 aa16.56■□□□□ 0.24
VAPB-203ENST00000463370 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
VAPB-203ENST00000463370 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
VAPB-203ENST00000463370 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
VAPB-203ENST00000463370 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
VAPB-203ENST00000463370 CLUAP1Q96AJ1 413 aa16.55■□□□□ 0.24
VAPB-203ENST00000463370 SBNO1A3KN83 1393 aa16.54■□□□□ 0.24
VAPB-203ENST00000463370 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
VAPB-203ENST00000463370 FLT4P35916 1363 aa16.53■□□□□ 0.24
VAPB-203ENST00000463370 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
VAPB-203ENST00000463370 AMPHP49418 695 aa16.52■□□□□ 0.24
VAPB-203ENST00000463370 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
VAPB-203ENST00000463370 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
VAPB-203ENST00000463370 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
VAPB-203ENST00000463370 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
VAPB-203ENST00000463370 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
VAPB-203ENST00000463370 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
VAPB-203ENST00000463370 HSPA2P54652 639 aa16.5■□□□□ 0.23
VAPB-203ENST00000463370 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
VAPB-203ENST00000463370 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
VAPB-203ENST00000463370 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
VAPB-203ENST00000463370 EYA1Q99502 592 aa16.5■□□□□ 0.23
VAPB-203ENST00000463370 IGHDP01880 384 aa16.49■□□□□ 0.23
VAPB-203ENST00000463370 HOXC9P31274 260 aa16.49■□□□□ 0.23
VAPB-203ENST00000463370 PSME1Q06323 249 aa16.49■□□□□ 0.23
VAPB-203ENST00000463370 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
VAPB-203ENST00000463370 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
VAPB-203ENST00000463370 FOXO3O43524 673 aa16.49■□□□□ 0.23
VAPB-203ENST00000463370 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
VAPB-203ENST00000463370 TRIM27P14373 513 aa16.48■□□□□ 0.23
VAPB-203ENST00000463370 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
VAPB-203ENST00000463370 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
VAPB-203ENST00000463370 GNAI1P63096 354 aa16.48■□□□□ 0.23
VAPB-203ENST00000463370 MCM10Q7L590 875 aa16.48■□□□□ 0.23
VAPB-203ENST00000463370 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
VAPB-203ENST00000463370 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
VAPB-203ENST00000463370 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
VAPB-203ENST00000463370 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
VAPB-203ENST00000463370 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
VAPB-203ENST00000463370 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
VAPB-203ENST00000463370 KDRP35968 1356 aa16.46■□□□□ 0.23
VAPB-203ENST00000463370 VAMP4O75379 141 aa16.46■□□□□ 0.23
VAPB-203ENST00000463370 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
VAPB-203ENST00000463370 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
VAPB-203ENST00000463370 MTHFSDQ2M296 383 aaKnown RBP16.45■□□□□ 0.22
VAPB-203ENST00000463370 DZIP1LQ8IYY4 767 aaKnown RBP16.45■□□□□ 0.22
VAPB-203ENST00000463370 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
VAPB-203ENST00000463370 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
VAPB-203ENST00000463370 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
VAPB-203ENST00000463370 USP54Q70EL1 1684 aa16.44■□□□□ 0.22
VAPB-203ENST00000463370 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
VAPB-203ENST00000463370 ATF7IPQ6VMQ6 1270 aa16.44■□□□□ 0.22
VAPB-203ENST00000463370 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
VAPB-203ENST00000463370 C19orf44Q9H6X5 657 aa16.43■□□□□ 0.22
VAPB-203ENST00000463370 NFAT5O94916 1531 aa16.43■□□□□ 0.22
VAPB-203ENST00000463370 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
VAPB-203ENST00000463370 KRT24Q2M2I5 525 aa16.43■□□□□ 0.22
VAPB-203ENST00000463370 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
VAPB-203ENST00000463370 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
VAPB-203ENST00000463370 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
VAPB-203ENST00000463370 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
VAPB-203ENST00000463370 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
VAPB-203ENST00000463370 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
VAPB-203ENST00000463370 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
VAPB-203ENST00000463370 MSH5O43196 834 aa16.41■□□□□ 0.22
VAPB-203ENST00000463370 PDE4AP27815 886 aa16.41■□□□□ 0.22
VAPB-203ENST00000463370 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
VAPB-203ENST00000463370 MRPL50Q8N5N7 158 aaKnown RBP16.41■□□□□ 0.22
VAPB-203ENST00000463370 KIF16BQ96L93 1317 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 MS4A1P11836 297 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
VAPB-203ENST00000463370 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 CRB1P82279 1406 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 CHL1O00533 1208 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 IP6K1Q92551 441 aa16.4■□□□□ 0.22
VAPB-203ENST00000463370 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
VAPB-203ENST00000463370 RGS3P49796 1198 aa16.38■□□□□ 0.21
VAPB-203ENST00000463370 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
VAPB-203ENST00000463370 GCP02774 474 aa16.38■□□□□ 0.21
VAPB-203ENST00000463370 BRPF1P55201 1214 aaPredicted RBP16.38■□□□□ 0.21
VAPB-203ENST00000463370 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
VAPB-203ENST00000463370 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
VAPB-203ENST00000463370 MST1RQ04912 1400 aa16.37■□□□□ 0.21
VAPB-203ENST00000463370 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
VAPB-203ENST00000463370 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms