RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
MSH2-204ENST00000461394 LRRC7Q96NW7 1537 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 RGL2O15211 777 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 HMOX1P09601 288 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 PSME1Q06323 249 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 NUTM2GQ5VZR2 741 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.86□□□□□ -0.99
MSH2-204ENST00000461394 OVOS2A0A0J9YW53 1432 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 OVOS2Q6IE36 1432 aa8.86□□□□□ -0.99
MSH2-204ENST00000461394 ZNF521Q96K83 1311 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 ZBTB7CA1YPR0 619 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 PRKAR2BP31323 418 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 AMPHP49418 695 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 NLRP6P59044 892 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 DUSP27Q5VZP5 1158 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 DAXXQ9UER7 740 aaPredicted RBP8.85□□□□□ -0.99
MSH2-204ENST00000461394 PNPLA6Q8IY17 1366 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
MSH2-204ENST00000461394 PLEKHG5O94827 1062 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 FCHSD2O94868 740 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 ATF3P18847 181 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 CANXP27824 592 aaKnown RBP8.84□□□□□ -0.99
MSH2-204ENST00000461394 RIPK4P57078 832 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 WDR63Q8IWG1 891 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 MYH16Q9H6N6 1097 aa8.84□□□□□ -0.99
MSH2-204ENST00000461394 LTN1O94822 1766 aa8.84□□□□□ -1
MSH2-204ENST00000461394 RNF123Q5XPI4 1314 aa8.83□□□□□ -1
MSH2-204ENST00000461394 PEAK1Q9H792 1746 aa8.83□□□□□ -1
MSH2-204ENST00000461394 PLIN1O60240 522 aa8.83□□□□□ -1
MSH2-204ENST00000461394 TMPOP42166 694 aaKnown RBP8.83□□□□□ -1
MSH2-204ENST00000461394 CCDC27Q2M243 656 aa8.83□□□□□ -1
MSH2-204ENST00000461394 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
MSH2-204ENST00000461394 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
MSH2-204ENST00000461394 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
MSH2-204ENST00000461394 DLG5Q8TDM6 1919 aa8.83□□□□□ -1
MSH2-204ENST00000461394 STRCP1A6NGW2 1772 aa8.83□□□□□ -1
MSH2-204ENST00000461394 USP54Q70EL1 1684 aa8.82□□□□□ -1
MSH2-204ENST00000461394 SSH2Q76I76 1423 aa8.82□□□□□ -1
MSH2-204ENST00000461394 IL13P35225 146 aa8.82□□□□□ -1
MSH2-204ENST00000461394 PLEKHF1Q96S99 279 aa8.82□□□□□ -1
MSH2-204ENST00000461394 RSPH6AQ9H0K4 717 aa8.82□□□□□ -1
MSH2-204ENST00000461394 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
MSH2-204ENST00000461394 LAS1LQ9Y4W2 734 aaKnown RBP8.82□□□□□ -1
MSH2-204ENST00000461394 USP31Q70CQ4 1352 aa8.82□□□□□ -1
MSH2-204ENST00000461394 MARF1Q9Y4F3 1742 aaKnown RBP8.82□□□□□ -1
MSH2-204ENST00000461394 KDM4FA0A1W2PPD8 638 aa8.81□□□□□ -1
MSH2-204ENST00000461394 XPCQ01831 940 aaPredicted RBP8.81□□□□□ -1
MSH2-204ENST00000461394 EIF4A2Q14240 407 aaKnown RBP8.81□□□□□ -1
MSH2-204ENST00000461394 NFE2L2Q16236 605 aa8.81□□□□□ -1
MSH2-204ENST00000461394 C19orf44Q9H6X5 657 aa8.81□□□□□ -1
MSH2-204ENST00000461394 SBNO1A3KN83 1393 aa8.81□□□□□ -1
MSH2-204ENST00000461394 FLT4P35916 1363 aa8.81□□□□□ -1
MSH2-204ENST00000461394 MAP3K19Q56UN5 1328 aa8.8□□□□□ -1
MSH2-204ENST00000461394 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
MSH2-204ENST00000461394 LMOD3Q0VAK6 560 aa8.8□□□□□ -1
MSH2-204ENST00000461394 POLA2Q14181 598 aa8.8□□□□□ -1
MSH2-204ENST00000461394 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
MSH2-204ENST00000461394 TRMT2AQ8IZ69 625 aaKnown RBP8.8□□□□□ -1
MSH2-204ENST00000461394 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
MSH2-204ENST00000461394 EXOC6Q8TAG9 804 aa8.8□□□□□ -1
MSH2-204ENST00000461394 LTV1Q96GA3 475 aaPredicted RBP8.8□□□□□ -1
MSH2-204ENST00000461394 ORAI2Q96SN7 254 aa8.8□□□□□ -1
MSH2-204ENST00000461394 MSH6P52701 1360 aa8.8□□□□□ -1
MSH2-204ENST00000461394 TMEM94Q12767 1356 aa8.8□□□□□ -1
MSH2-204ENST00000461394 STRCQ7RTU9 1775 aa8.8□□□□□ -1
MSH2-204ENST00000461394 LMTK3Q96Q04 1460 aa8.79□□□□□ -1
MSH2-204ENST00000461394 FOXO3O43524 673 aa8.79□□□□□ -1
MSH2-204ENST00000461394 HSP90AB2PQ58FF8 381 aa8.79□□□□□ -1
MSH2-204ENST00000461394 CRBNQ96SW2 442 aa8.79□□□□□ -1
MSH2-204ENST00000461394 ZBTB12Q9Y330 459 aaPredicted RBP8.79□□□□□ -1
MSH2-204ENST00000461394 C1orf167Q5SNV9 1468 aa8.78□□□□□ -1
MSH2-204ENST00000461394 RGPD1P0DJD0 1748 aa8.78□□□□□ -1
MSH2-204ENST00000461394 KRT28Q7Z3Y7 464 aa8.78□□□□□ -1
MSH2-204ENST00000461394 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
MSH2-204ENST00000461394 TSR2Q969E8 191 aaKnown RBP8.78□□□□□ -1
MSH2-204ENST00000461394 PHACTR3Q96KR7 559 aa8.78□□□□□ -1
MSH2-204ENST00000461394 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
MSH2-204ENST00000461394 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1
MSH2-204ENST00000461394 TRPM3Q9HCF6 1732 aaPredicted RBP8.77□□□□□ -1
MSH2-204ENST00000461394 ARHGEF10O15013 1369 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 BCAR3O75815 825 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 CADPS2Q86UW7 1296 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 KCNH5Q8NCM2 988 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 IL16Q14005 1332 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 FANCIQ9NVI1 1328 aa8.77□□□□□ -1.01
MSH2-204ENST00000461394 HOXC9P31274 260 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
MSH2-204ENST00000461394 C20orf194Q5TEA3 1177 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 BCL2L13Q9BXK5 485 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 DCCP43146 1447 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 MST1RQ04912 1400 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 NCOA3Q9Y6Q9 1424 aa8.76□□□□□ -1.01
MSH2-204ENST00000461394 RTL1A6NKG5 1358 aa8.75□□□□□ -1.01
MSH2-204ENST00000461394 KIF24Q5T7B8 1368 aa8.75□□□□□ -1.01
MSH2-204ENST00000461394 GNAI1P63096 354 aa8.75□□□□□ -1.01
MSH2-204ENST00000461394 THUMPD2Q9BTF0 503 aaKnown RBP8.75□□□□□ -1.01
MSH2-204ENST00000461394 SMC4Q9NTJ3 1288 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms