RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 MSH5O43196 834 aa26.02■■□□□ 1.76
CCM2-203ENST00000461377 ZKSCAN2Q63HK3 967 aa26.02■■□□□ 1.76
CCM2-203ENST00000461377 PIK3C2AO00443 1686 aa26.01■■□□□ 1.76
CCM2-203ENST00000461377 SKAP1Q86WV1 359 aa26.01■■□□□ 1.75
CCM2-203ENST00000461377 LMOD3Q0VAK6 560 aa26■■□□□ 1.75
CCM2-203ENST00000461377 SSH1Q8WYL5 1049 aa26■■□□□ 1.75
CCM2-203ENST00000461377 SMC4Q9NTJ3 1288 aa26■■□□□ 1.75
CCM2-203ENST00000461377 RGPD1P0DJD0 1748 aa26■■□□□ 1.75
CCM2-203ENST00000461377 PDE4AP27815 886 aa26■■□□□ 1.75
CCM2-203ENST00000461377 HSP90AB2PQ58FF8 381 aa25.98■■□□□ 1.75
CCM2-203ENST00000461377 BACH2Q9BYV9 841 aa25.98■■□□□ 1.75
CCM2-203ENST00000461377 IFT57Q9NWB7 429 aa25.98■■□□□ 1.75
CCM2-203ENST00000461377 MAP3K19Q56UN5 1328 aa25.97■■□□□ 1.75
CCM2-203ENST00000461377 SBNO1A3KN83 1393 aa25.97■■□□□ 1.75
CCM2-203ENST00000461377 USP54Q70EL1 1684 aa25.97■■□□□ 1.75
CCM2-203ENST00000461377 IGHDP01880 384 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 ZNF853P0CG23 659 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 THUMPD2Q9BTF0 503 aaKnown RBP25.96■■□□□ 1.75
CCM2-203ENST00000461377 DNAJC5Q9H3Z4 198 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 NPHP4O75161 1426 aaPredicted RBP25.96■■□□□ 1.75
CCM2-203ENST00000461377 GNAI1P63096 354 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 SULT6B1Q6IMI4 303 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 AEBP1Q8IUX7 1158 aa25.96■■□□□ 1.75
CCM2-203ENST00000461377 DLG5Q8TDM6 1919 aa25.95■■□□□ 1.75
CCM2-203ENST00000461377 ALDH1L2Q3SY69 923 aa25.95■■□□□ 1.75
CCM2-203ENST00000461377 DZIP1LQ8IYY4 767 aaKnown RBP25.95■■□□□ 1.75
CCM2-203ENST00000461377 FLT4P35916 1363 aa25.95■■□□□ 1.74
CCM2-203ENST00000461377 MVPQ14764 893 aaKnown RBP25.95■■□□□ 1.74
CCM2-203ENST00000461377 ZNF428Q96B54 188 aa25.95■■□□□ 1.74
CCM2-203ENST00000461377 ADGRL3Q9HAR2 1447 aa25.93■■□□□ 1.74
CCM2-203ENST00000461377 SOX12O15370 315 aa25.93■■□□□ 1.74
CCM2-203ENST00000461377 LAS1LQ9Y4W2 734 aaKnown RBP25.93■■□□□ 1.74
CCM2-203ENST00000461377 ARHGEF10O15013 1369 aa25.93■■□□□ 1.74
CCM2-203ENST00000461377 TRIM27P14373 513 aa25.92■■□□□ 1.74
CCM2-203ENST00000461377 FTSJ3Q8IY81 847 aaKnown RBP25.92■■□□□ 1.74
CCM2-203ENST00000461377 MARF1Q9Y4F3 1742 aaKnown RBP25.92■■□□□ 1.74
CCM2-203ENST00000461377 KIF16BQ96L93 1317 aa25.92■■□□□ 1.74
CCM2-203ENST00000461377 ATF7IPQ6VMQ6 1270 aa25.91■■□□□ 1.74
CCM2-203ENST00000461377 CFAP44Q96MT7 982 aa25.91■■□□□ 1.74
CCM2-203ENST00000461377 NOB1Q9ULX3 412 aaKnown RBP25.91■■□□□ 1.74
CCM2-203ENST00000461377 BRPF1P55201 1214 aaPredicted RBP25.9■■□□□ 1.74
CCM2-203ENST00000461377 NLRP6P59044 892 aa25.9■■□□□ 1.74
CCM2-203ENST00000461377 MBIPQ9NS73 344 aa25.9■■□□□ 1.74
CCM2-203ENST00000461377 PHF8Q9UPP1 1060 aa25.9■■□□□ 1.74
CCM2-203ENST00000461377 PCDHB15Q9Y5E8 787 aa25.89■■□□□ 1.74
CCM2-203ENST00000461377 KIF24Q5T7B8 1368 aa25.88■■□□□ 1.73
CCM2-203ENST00000461377 FAM83GA6ND36 823 aa25.88■■□□□ 1.73
CCM2-203ENST00000461377 VAMP4O75379 141 aa25.87■■□□□ 1.73
CCM2-203ENST00000461377 ANP32AP39687 249 aaKnown RBP25.87■■□□□ 1.73
CCM2-203ENST00000461377 IPO8O15397 1037 aaKnown RBP25.87■■□□□ 1.73
CCM2-203ENST00000461377 NWD1Q149M9 1564 aa25.86■■□□□ 1.73
CCM2-203ENST00000461377 AMPHP49418 695 aa25.86■■□□□ 1.73
CCM2-203ENST00000461377 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
CCM2-203ENST00000461377 KDRP35968 1356 aa25.85■■□□□ 1.73
CCM2-203ENST00000461377 IGSF1Q8N6C5 1336 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 DCTN1Q14203 1278 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 ABTB2Q8N961 1025 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 ANP32EQ9BTT0 268 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 TSPYL6Q8N831 410 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 DDX19BQ9UMR2 479 aa25.84■■□□□ 1.73
CCM2-203ENST00000461377 RGS3P49796 1198 aa25.82■■□□□ 1.72
CCM2-203ENST00000461377 NUTM2GQ5VZR2 741 aa25.82■■□□□ 1.72
CCM2-203ENST00000461377 MRPL50Q8N5N7 158 aaKnown RBP25.82■■□□□ 1.72
CCM2-203ENST00000461377 PAK3O75914 559 aaPredicted RBP25.81■■□□□ 1.72
CCM2-203ENST00000461377 HOXC9P31274 260 aa25.8■■□□□ 1.72
CCM2-203ENST00000461377 ITPRIPQ8IWB1 547 aa25.8■■□□□ 1.72
CCM2-203ENST00000461377 TMEM57Q8N5G2 664 aa25.8■■□□□ 1.72
CCM2-203ENST00000461377 EYA1Q99502 592 aa25.8■■□□□ 1.72
CCM2-203ENST00000461377 RWDD1Q9H446 243 aaPredicted RBP25.8■■□□□ 1.72
CCM2-203ENST00000461377 TWISTNBQ3B726 338 aaPredicted RBP25.8■■□□□ 1.72
CCM2-203ENST00000461377 FAM161AQ3B820 660 aa25.8■■□□□ 1.72
CCM2-203ENST00000461377 IPO9Q96P70 1041 aaKnown RBP25.79■■□□□ 1.72
CCM2-203ENST00000461377 C8orf58Q8NAV2 365 aa25.78■■□□□ 1.72
CCM2-203ENST00000461377 ARHGAP45Q92619 1136 aa25.78■■□□□ 1.72
CCM2-203ENST00000461377 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
CCM2-203ENST00000461377 C8orf34Q49A92 452 aa25.77■■□□□ 1.72
CCM2-203ENST00000461377 ESCO1Q5FWF5 840 aa25.77■■□□□ 1.72
CCM2-203ENST00000461377 CHL1O00533 1208 aa25.76■■□□□ 1.72
CCM2-203ENST00000461377 MCM10Q7L590 875 aa25.76■■□□□ 1.71
CCM2-203ENST00000461377 CRB1P82279 1406 aa25.76■■□□□ 1.71
CCM2-203ENST00000461377 MTHFSDQ2M296 383 aaKnown RBP25.75■■□□□ 1.71
CCM2-203ENST00000461377 ELL2O00472 640 aaPredicted RBP25.75■■□□□ 1.71
CCM2-203ENST00000461377 C14orf37Q86TY3 774 aa25.75■■□□□ 1.71
CCM2-203ENST00000461377 NFAT5O94916 1531 aa25.74■■□□□ 1.71
CCM2-203ENST00000461377 ZBTB40Q9NUA8 1239 aa25.74■■□□□ 1.71
CCM2-203ENST00000461377 PSME1Q06323 249 aa25.73■■□□□ 1.71
CCM2-203ENST00000461377 HDAC1Q13547 482 aaPredicted RBP25.73■■□□□ 1.71
CCM2-203ENST00000461377 ERICH6Q7L0X2 663 aa25.73■■□□□ 1.71
CCM2-203ENST00000461377 NPM2Q86SE8 214 aaKnown RBP25.73■■□□□ 1.71
CCM2-203ENST00000461377 NOP58Q9Y2X3 529 aaKnown RBP25.73■■□□□ 1.71
CCM2-203ENST00000461377 KIAA0232Q92628 1395 aa25.72■■□□□ 1.71
CCM2-203ENST00000461377 GAS2L2Q8NHY3 880 aa25.72■■□□□ 1.71
CCM2-203ENST00000461377 FOXO3O43524 673 aa25.71■■□□□ 1.71
CCM2-203ENST00000461377 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
CCM2-203ENST00000461377 ABCC4O15439 1325 aa25.7■■□□□ 1.7
CCM2-203ENST00000461377 LTN1O94822 1766 aa25.69■■□□□ 1.7
CCM2-203ENST00000461377 HAP1P54257 671 aaPredicted RBP25.69■■□□□ 1.7
CCM2-203ENST00000461377 PROSER2Q86WR7 435 aaPredicted RBP25.68■■□□□ 1.7
CCM2-203ENST00000461377 ORAI2Q96SN7 254 aa25.68■■□□□ 1.7
CCM2-203ENST00000461377 RTF1Q92541 710 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms