RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 NSD2O96028 1365 aa17.56■□□□□ 0.4
NCL-207ENST00000461347 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
NCL-207ENST00000461347 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
NCL-207ENST00000461347 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
NCL-207ENST00000461347 FAM83GA6ND36 823 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 DIAPH3Q9NSV4 1193 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 IL16Q14005 1332 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 SYCE3A1L190 88 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 NME9Q86XW9 330 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 VPS37CA5D8V6 355 aaPredicted RBP17.55■□□□□ 0.4
NCL-207ENST00000461347 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
NCL-207ENST00000461347 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
NCL-207ENST00000461347 MCM10Q7L590 875 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 MBIPQ9NS73 344 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 SNX21Q969T3 373 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 USP19O94966 1318 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 SMC3Q9UQE7 1217 aa17.54■□□□□ 0.4
NCL-207ENST00000461347 GPATCH3Q96I76 525 aa17.53■□□□□ 0.4
NCL-207ENST00000461347 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
NCL-207ENST00000461347 PLXNC1O60486 1568 aa17.52■□□□□ 0.4
NCL-207ENST00000461347 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
NCL-207ENST00000461347 GNAI2P04899 355 aa17.52■□□□□ 0.4
NCL-207ENST00000461347 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
NCL-207ENST00000461347 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.39
NCL-207ENST00000461347 GOLGA6L6A8MZA4 724 aa17.52■□□□□ 0.39
NCL-207ENST00000461347 UBTFL1P0CB47 393 aaPredicted RBP17.52■□□□□ 0.39
NCL-207ENST00000461347 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 KLHL40Q2TBA0 621 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 GNAI3P08754 354 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 MCM2P49736 904 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
NCL-207ENST00000461347 FIBPO43427 364 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 RAB3GAP1Q15042 981 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 TRIM35Q9UPQ4 493 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 PTPRTO14522 1441 aa17.51■□□□□ 0.39
NCL-207ENST00000461347 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
NCL-207ENST00000461347 F6X3S4 739 aa17.5■□□□□ 0.39
NCL-207ENST00000461347 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
NCL-207ENST00000461347 ANTXR1Q9H6X2 564 aa17.5■□□□□ 0.39
NCL-207ENST00000461347 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
NCL-207ENST00000461347 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
NCL-207ENST00000461347 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
NCL-207ENST00000461347 MAP4K4O95819 1239 aaPredicted RBP17.49■□□□□ 0.39
NCL-207ENST00000461347 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
NCL-207ENST00000461347 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
NCL-207ENST00000461347 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
NCL-207ENST00000461347 VAMP4O75379 141 aa17.48■□□□□ 0.39
NCL-207ENST00000461347 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
NCL-207ENST00000461347 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
NCL-207ENST00000461347 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
NCL-207ENST00000461347 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
NCL-207ENST00000461347 MRPL50Q8N5N7 158 aaKnown RBP17.48■□□□□ 0.39
NCL-207ENST00000461347 CYB5RLQ6IPT4 315 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
NCL-207ENST00000461347 ABCC1P33527 1531 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
NCL-207ENST00000461347 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
NCL-207ENST00000461347 A0A1W2PP64 1363 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 UQCRHLA0A096LP55 91 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.47■□□□□ 0.39
NCL-207ENST00000461347 UQCRHP07919 91 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
NCL-207ENST00000461347 TEFQ10587 303 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
NCL-207ENST00000461347 SDSP20132 328 aa17.46■□□□□ 0.39
NCL-207ENST00000461347 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
NCL-207ENST00000461347 ARHGAP45Q92619 1136 aa17.46■□□□□ 0.39
NCL-207ENST00000461347 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
NCL-207ENST00000461347 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
NCL-207ENST00000461347 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.38
NCL-207ENST00000461347 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.38
NCL-207ENST00000461347 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
NCL-207ENST00000461347 IFIT2P09913 472 aaKnown RBP17.45■□□□□ 0.38
NCL-207ENST00000461347 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 POLKQ9UBT6 870 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 ATP10AO60312 1499 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 NRDCO43847 1150 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 ZSCAN23Q3MJ62 389 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 MEIS3Q99687 375 aa17.45■□□□□ 0.38
NCL-207ENST00000461347 HTATSF1O43719 755 aaKnown RBP17.44■□□□□ 0.38
NCL-207ENST00000461347 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
NCL-207ENST00000461347 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
NCL-207ENST00000461347 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
NCL-207ENST00000461347 NLRP6P59044 892 aa17.43■□□□□ 0.38
NCL-207ENST00000461347 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
NCL-207ENST00000461347 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
NCL-207ENST00000461347 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
NCL-207ENST00000461347 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms