RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
NUP50-212ENST00000461194 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
NUP50-212ENST00000461194 ZFRQ96KR1 1074 aaKnown RBP10.5□□□□□ -0.73
NUP50-212ENST00000461194 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
NUP50-212ENST00000461194 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
NUP50-212ENST00000461194 TNRQ92752 1358 aa10.5□□□□□ -0.73
NUP50-212ENST00000461194 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
NUP50-212ENST00000461194 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
NUP50-212ENST00000461194 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
NUP50-212ENST00000461194 KANK1Q14678 1352 aa10.49□□□□□ -0.73
NUP50-212ENST00000461194 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
NUP50-212ENST00000461194 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
NUP50-212ENST00000461194 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
NUP50-212ENST00000461194 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
NUP50-212ENST00000461194 ARHGAP31Q2M1Z3 1444 aa10.48□□□□□ -0.73
NUP50-212ENST00000461194 ITGAEP38570 1179 aa10.47□□□□□ -0.73
NUP50-212ENST00000461194 FAM117AQ9C073 453 aa10.47□□□□□ -0.73
NUP50-212ENST00000461194 A2ML1A8K2U0 1454 aa10.47□□□□□ -0.73
NUP50-212ENST00000461194 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
NUP50-212ENST00000461194 MS4A1P11836 297 aa10.46□□□□□ -0.73
NUP50-212ENST00000461194 PCDH10Q9P2E7 1040 aa10.46□□□□□ -0.73
NUP50-212ENST00000461194 CEP170BQ9Y4F5 1589 aaPredicted RBP10.46□□□□□ -0.74
NUP50-212ENST00000461194 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
NUP50-212ENST00000461194 MYO3AQ8NEV4 1616 aa10.46□□□□□ -0.74
NUP50-212ENST00000461194 SPATA31D1Q6ZQQ2 1576 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 LMTK2Q8IWU2 1503 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 ERVK-7P63135 1459 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 PLA2R1Q13018 1463 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 NLRP1Q9C000 1473 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 PTPRTO14522 1441 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 RNF40O75150 1001 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
NUP50-212ENST00000461194 CAMSAP1Q5T5Y3 1602 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 VWDEQ8N2E2 1590 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 RDH13Q8NBN7 331 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 ANKK1Q8NFD2 765 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 WNT2BQ93097 391 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
NUP50-212ENST00000461194 ZNF142P52746 1687 aaPredicted RBP10.44□□□□□ -0.74
NUP50-212ENST00000461194 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
NUP50-212ENST00000461194 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
NUP50-212ENST00000461194 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
NUP50-212ENST00000461194 STRCQ7RTU9 1775 aa10.43□□□□□ -0.74
NUP50-212ENST00000461194 SLF2Q8IX21 1173 aa10.42□□□□□ -0.74
NUP50-212ENST00000461194 CEP152O94986 1710 aa10.41□□□□□ -0.74
NUP50-212ENST00000461194 UGGT1Q9NYU2 1555 aa10.4□□□□□ -0.74
NUP50-212ENST00000461194 SLC10A3P09131 477 aa10.4□□□□□ -0.74
NUP50-212ENST00000461194 BCAMP50895 628 aa10.4□□□□□ -0.74
NUP50-212ENST00000461194 ANKLE2Q86XL3 938 aa10.4□□□□□ -0.74
NUP50-212ENST00000461194 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
NUP50-212ENST00000461194 DDRGK1Q96HY6 314 aa10.4□□□□□ -0.74
NUP50-212ENST00000461194 NOS1P29475 1434 aa10.4□□□□□ -0.75
NUP50-212ENST00000461194 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
NUP50-212ENST00000461194 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
NUP50-212ENST00000461194 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
NUP50-212ENST00000461194 CD46P15529 392 aa10.39□□□□□ -0.75
NUP50-212ENST00000461194 NUP155O75694 1391 aa10.39□□□□□ -0.75
NUP50-212ENST00000461194 EFCAB6Q5THR3 1501 aa10.38□□□□□ -0.75
NUP50-212ENST00000461194 IDI1Q13907 227 aa10.38□□□□□ -0.75
NUP50-212ENST00000461194 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
NUP50-212ENST00000461194 NAIPQ13075 1403 aa10.38□□□□□ -0.75
NUP50-212ENST00000461194 UNC13BO14795 1591 aa10.38□□□□□ -0.75
NUP50-212ENST00000461194 PPP4CP60510 307 aa10.37□□□□□ -0.75
NUP50-212ENST00000461194 FBXO41Q8TF61 875 aa10.37□□□□□ -0.75
NUP50-212ENST00000461194 HPS5Q9UPZ3 1129 aa10.37□□□□□ -0.75
NUP50-212ENST00000461194 HFM1A2PYH4 1435 aa10.36□□□□□ -0.75
NUP50-212ENST00000461194 GCGRP47871 477 aa10.35□□□□□ -0.75
NUP50-212ENST00000461194 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
NUP50-212ENST00000461194 NUTM1Q86Y26 1132 aa10.35□□□□□ -0.75
NUP50-212ENST00000461194 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
NUP50-212ENST00000461194 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
NUP50-212ENST00000461194 MED14O60244 1454 aa10.35□□□□□ -0.75
NUP50-212ENST00000461194 TET3O43151 1660 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 ZNF335Q9H4Z2 1342 aaPredicted RBP10.34□□□□□ -0.75
NUP50-212ENST00000461194 NPHP4O75161 1426 aaPredicted RBP10.34□□□□□ -0.75
NUP50-212ENST00000461194 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 TMEM2Q9UHN6 1383 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 ARHGAP23Q9P227 1491 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 SYNMO15061 1565 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 NEURL4Q96JN8 1562 aa10.34□□□□□ -0.75
NUP50-212ENST00000461194 SLIT1O75093 1534 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 IQGAP3Q86VI3 1631 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 CFHP08603 1231 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 LTKP29376 864 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 EID1Q9Y6B2 187 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
NUP50-212ENST00000461194 LTBP4Q8N2S1 1624 aa10.33□□□□□ -0.76
NUP50-212ENST00000461194 SCAF11Q99590 1463 aaKnown RBP10.32□□□□□ -0.76
NUP50-212ENST00000461194 PTPN5P54829 565 aa10.32□□□□□ -0.76
NUP50-212ENST00000461194 SPIRE2Q8WWL2 714 aa10.32□□□□□ -0.76
NUP50-212ENST00000461194 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
NUP50-212ENST00000461194 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
NUP50-212ENST00000461194 KDM4AO75164 1064 aa10.31□□□□□ -0.76
NUP50-212ENST00000461194 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
NUP50-212ENST00000461194 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
NUP50-212ENST00000461194 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
NUP50-212ENST00000461194 GCC2Q8IWJ2 1684 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms