RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
CDK11A-209ENST00000460465 FLT4P35916 1363 aa22.74■■□□□ 1.23
CDK11A-209ENST00000460465 ZNF335Q9H4Z2 1342 aaPredicted RBP22.73■■□□□ 1.23
CDK11A-209ENST00000460465 XPCQ01831 940 aaPredicted RBP22.73■■□□□ 1.23
CDK11A-209ENST00000460465 WDR63Q8IWG1 891 aa22.73■■□□□ 1.23
CDK11A-209ENST00000460465 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
CDK11A-209ENST00000460465 RRP1P56182 461 aaKnown RBP22.71■■□□□ 1.23
CDK11A-209ENST00000460465 ERICH6BQ5W0A0 696 aa22.71■■□□□ 1.23
CDK11A-209ENST00000460465 NFAT5O94916 1531 aa22.7■■□□□ 1.23
CDK11A-209ENST00000460465 AMPHP49418 695 aa22.7■■□□□ 1.22
CDK11A-209ENST00000460465 NEFMP07197 916 aa22.7■■□□□ 1.22
CDK11A-209ENST00000460465 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
CDK11A-209ENST00000460465 TRIM35Q9UPQ4 493 aa22.69■■□□□ 1.22
CDK11A-209ENST00000460465 KIF24Q5T7B8 1368 aa22.68■■□□□ 1.22
CDK11A-209ENST00000460465 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
CDK11A-209ENST00000460465 DLG5Q8TDM6 1919 aa22.68■■□□□ 1.22
CDK11A-209ENST00000460465 RIPK4P57078 832 aa22.68■■□□□ 1.22
CDK11A-209ENST00000460465 PHACTR3Q96KR7 559 aa22.68■■□□□ 1.22
CDK11A-209ENST00000460465 SLIT3O75094 1523 aa22.66■■□□□ 1.22
CDK11A-209ENST00000460465 HOXC9P31274 260 aa22.65■■□□□ 1.22
CDK11A-209ENST00000460465 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
CDK11A-209ENST00000460465 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
CDK11A-209ENST00000460465 NFE2L2Q16236 605 aa22.64■■□□□ 1.22
CDK11A-209ENST00000460465 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.22
CDK11A-209ENST00000460465 RTL1A6NKG5 1358 aa22.64■■□□□ 1.21
CDK11A-209ENST00000460465 ARHGEF10O15013 1369 aa22.64■■□□□ 1.21
CDK11A-209ENST00000460465 KCNH5Q8NCM2 988 aa22.63■■□□□ 1.21
CDK11A-209ENST00000460465 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
CDK11A-209ENST00000460465 DDX17Q92841 729 aaKnown RBP22.62■■□□□ 1.21
CDK11A-209ENST00000460465 MYH16Q9H6N6 1097 aa22.6■■□□□ 1.21
CDK11A-209ENST00000460465 PPP4R2Q9NY27 417 aa22.6■■□□□ 1.21
CDK11A-209ENST00000460465 USP19O94966 1318 aa22.6■■□□□ 1.21
CDK11A-209ENST00000460465 NPHP3Q7Z494 1330 aa22.6■■□□□ 1.21
CDK11A-209ENST00000460465 PLIN1O60240 522 aa22.59■■□□□ 1.21
CDK11A-209ENST00000460465 IL16Q14005 1332 aa22.59■■□□□ 1.21
CDK11A-209ENST00000460465 IGSF1Q8N6C5 1336 aa22.59■■□□□ 1.21
CDK11A-209ENST00000460465 PXDNQ92626 1479 aa22.58■■□□□ 1.21
CDK11A-209ENST00000460465 PLEKHG5O94827 1062 aa22.58■■□□□ 1.21
CDK11A-209ENST00000460465 EYA1Q99502 592 aa22.58■■□□□ 1.21
CDK11A-209ENST00000460465 GCP02774 474 aa22.58■■□□□ 1.2
CDK11A-209ENST00000460465 MED1Q15648 1581 aaPredicted RBP22.57■■□□□ 1.2
CDK11A-209ENST00000460465 IP6K1Q92551 441 aa22.57■■□□□ 1.2
CDK11A-209ENST00000460465 KDRP35968 1356 aa22.57■■□□□ 1.2
CDK11A-209ENST00000460465 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
CDK11A-209ENST00000460465 ZBTB7CA1YPR0 619 aa22.56■■□□□ 1.2
CDK11A-209ENST00000460465 BRINP3Q76B58 766 aa22.56■■□□□ 1.2
CDK11A-209ENST00000460465 TSR2Q969E8 191 aaKnown RBP22.55■■□□□ 1.2
CDK11A-209ENST00000460465 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
CDK11A-209ENST00000460465 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
CDK11A-209ENST00000460465 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
CDK11A-209ENST00000460465 LMOD3Q0VAK6 560 aa22.53■■□□□ 1.2
CDK11A-209ENST00000460465 SLAIN2Q9P270 581 aa22.53■■□□□ 1.2
CDK11A-209ENST00000460465 CRYBG1Q9Y4K1 1723 aa22.53■■□□□ 1.2
CDK11A-209ENST00000460465 ARHGEF25Q86VW2 580 aa22.53■■□□□ 1.2
CDK11A-209ENST00000460465 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
CDK11A-209ENST00000460465 BCAR3O75815 825 aa22.52■■□□□ 1.2
CDK11A-209ENST00000460465 RGPD5Q99666 1765 aa22.51■■□□□ 1.19
CDK11A-209ENST00000460465 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.51■■□□□ 1.19
CDK11A-209ENST00000460465 EXOC6Q8TAG9 804 aa22.51■■□□□ 1.19
CDK11A-209ENST00000460465 CALD1Q05682 793 aaKnown RBP22.5■■□□□ 1.19
CDK11A-209ENST00000460465 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
CDK11A-209ENST00000460465 B4GALNT3Q6L9W6 998 aa22.49■■□□□ 1.19
CDK11A-209ENST00000460465 FAM83GA6ND36 823 aa22.49■■□□□ 1.19
CDK11A-209ENST00000460465 EXOSC9Q06265 439 aaKnown RBP22.48■■□□□ 1.19
CDK11A-209ENST00000460465 C20orf194Q5TEA3 1177 aa22.48■■□□□ 1.19
CDK11A-209ENST00000460465 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
CDK11A-209ENST00000460465 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
CDK11A-209ENST00000460465 NHSL1Q5SYE7 1610 aa22.46■■□□□ 1.19
CDK11A-209ENST00000460465 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
CDK11A-209ENST00000460465 MTHFSDQ2M296 383 aaKnown RBP22.46■■□□□ 1.19
CDK11A-209ENST00000460465 USHBP1Q8N6Y0 703 aa22.46■■□□□ 1.19
CDK11A-209ENST00000460465 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
CDK11A-209ENST00000460465 IFT57Q9NWB7 429 aa22.46■■□□□ 1.19
CDK11A-209ENST00000460465 CT47B1P0C2W7 299 aaPredicted RBP22.45■■□□□ 1.18
CDK11A-209ENST00000460465 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
CDK11A-209ENST00000460465 GNAI1P63096 354 aa22.45■■□□□ 1.18
CDK11A-209ENST00000460465 CAMTA1Q9Y6Y1 1673 aa22.44■■□□□ 1.18
CDK11A-209ENST00000460465 NBPF6Q5VWK0 638 aa22.44■■□□□ 1.18
CDK11A-209ENST00000460465 NBPF4Q96M43 638 aa22.44■■□□□ 1.18
CDK11A-209ENST00000460465 COL18A1P39060 1754 aa22.44■■□□□ 1.18
CDK11A-209ENST00000460465 ZNF853P0CG23 659 aa22.43■■□□□ 1.18
CDK11A-209ENST00000460465 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
CDK11A-209ENST00000460465 SOS2Q07890 1332 aaPredicted RBP22.43■■□□□ 1.18
CDK11A-209ENST00000460465 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
CDK11A-209ENST00000460465 AXIN2Q9Y2T1 843 aa22.42■■□□□ 1.18
CDK11A-209ENST00000460465 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
CDK11A-209ENST00000460465 LRRC59Q96AG4 307 aaKnown RBP22.42■■□□□ 1.18
CDK11A-209ENST00000460465 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
CDK11A-209ENST00000460465 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
CDK11A-209ENST00000460465 MCM10Q7L590 875 aa22.41■■□□□ 1.18
CDK11A-209ENST00000460465 CFAP44Q96MT7 982 aa22.41■■□□□ 1.18
CDK11A-209ENST00000460465 BCL2L13Q9BXK5 485 aa22.41■■□□□ 1.18
CDK11A-209ENST00000460465 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
CDK11A-209ENST00000460465 ABCA3Q99758 1704 aa22.39■■□□□ 1.18
CDK11A-209ENST00000460465 NCAPD2Q15021 1401 aa22.39■■□□□ 1.18
CDK11A-209ENST00000460465 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
CDK11A-209ENST00000460465 LRRC37A3O60309 1634 aa22.38■■□□□ 1.17
CDK11A-209ENST00000460465 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
CDK11A-209ENST00000460465 ABCC6O95255 1503 aa22.38■■□□□ 1.17
CDK11A-209ENST00000460465 LMO7Q8WWI1 1683 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms