RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
VPS50-207ENST00000458530 TMC1Q8TDI8 760 aa12.09□□□□□ -0.47
VPS50-207ENST00000458530 MRS2Q9HD23 443 aa12.09□□□□□ -0.47
VPS50-207ENST00000458530 SBNO1A3KN83 1393 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
VPS50-207ENST00000458530 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 NLRP13Q86W25 1043 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 NRAPQ86VF7 1730 aa12.08□□□□□ -0.48
VPS50-207ENST00000458530 BAG6P46379 1132 aa12.07□□□□□ -0.48
VPS50-207ENST00000458530 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
VPS50-207ENST00000458530 NSD3Q9BZ95 1437 aa12.07□□□□□ -0.48
VPS50-207ENST00000458530 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
VPS50-207ENST00000458530 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
VPS50-207ENST00000458530 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
VPS50-207ENST00000458530 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
VPS50-207ENST00000458530 CGNL1Q0VF96 1302 aa12.06□□□□□ -0.48
VPS50-207ENST00000458530 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
VPS50-207ENST00000458530 WASLO00401 505 aaPredicted RBP12.05□□□□□ -0.48
VPS50-207ENST00000458530 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
VPS50-207ENST00000458530 THSD7AQ9UPZ6 1657 aa12.05□□□□□ -0.48
VPS50-207ENST00000458530 RGPD1P0DJD0 1748 aa12.05□□□□□ -0.48
VPS50-207ENST00000458530 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
VPS50-207ENST00000458530 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
VPS50-207ENST00000458530 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
VPS50-207ENST00000458530 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
VPS50-207ENST00000458530 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
VPS50-207ENST00000458530 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
VPS50-207ENST00000458530 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
VPS50-207ENST00000458530 SLC12A5Q9H2X9 1139 aa12.03□□□□□ -0.48
VPS50-207ENST00000458530 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
VPS50-207ENST00000458530 PSME1Q06323 249 aa12.02□□□□□ -0.49
VPS50-207ENST00000458530 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
VPS50-207ENST00000458530 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
VPS50-207ENST00000458530 CAMKK2Q96RR4 588 aa12.02□□□□□ -0.49
VPS50-207ENST00000458530 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
VPS50-207ENST00000458530 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
VPS50-207ENST00000458530 ANKARQ7Z5J8 1434 aa12.02□□□□□ -0.49
VPS50-207ENST00000458530 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
VPS50-207ENST00000458530 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
VPS50-207ENST00000458530 SPATA31A5Q5VU36 1347 aa12.01□□□□□ -0.49
VPS50-207ENST00000458530 SPATA31A7Q8IWB4 1347 aa12.01□□□□□ -0.49
VPS50-207ENST00000458530 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
VPS50-207ENST00000458530 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
VPS50-207ENST00000458530 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
VPS50-207ENST00000458530 CCDC61Q9Y6R9 512 aa12□□□□□ -0.49
VPS50-207ENST00000458530 INSRP06213 1382 aa12□□□□□ -0.49
VPS50-207ENST00000458530 EDC4Q6P2E9 1401 aaKnown RBP12□□□□□ -0.49
VPS50-207ENST00000458530 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
VPS50-207ENST00000458530 ALS2Q96Q42 1657 aa12□□□□□ -0.49
VPS50-207ENST00000458530 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
VPS50-207ENST00000458530 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
VPS50-207ENST00000458530 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
VPS50-207ENST00000458530 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
VPS50-207ENST00000458530 CPSF1Q10570 1443 aaKnown RBP11.98□□□□□ -0.49
VPS50-207ENST00000458530 EZH2Q15910 746 aaKnown RBP11.98□□□□□ -0.49
VPS50-207ENST00000458530 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
VPS50-207ENST00000458530 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
VPS50-207ENST00000458530 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
VPS50-207ENST00000458530 CCDC9Q9Y3X0 531 aaKnown RBP11.98□□□□□ -0.49
VPS50-207ENST00000458530 RREB1Q92766 1687 aa11.97□□□□□ -0.49
VPS50-207ENST00000458530 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
VPS50-207ENST00000458530 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
VPS50-207ENST00000458530 FAM182BQ5T319 152 aa11.97□□□□□ -0.49
VPS50-207ENST00000458530 CABP1Q9NZU7 370 aa11.97□□□□□ -0.49
VPS50-207ENST00000458530 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
VPS50-207ENST00000458530 CCDC184Q52MB2 194 aa11.96□□□□□ -0.49
VPS50-207ENST00000458530 GABBR2O75899 941 aa11.95□□□□□ -0.5
VPS50-207ENST00000458530 YY1P25490 414 aa11.95□□□□□ -0.5
VPS50-207ENST00000458530 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
VPS50-207ENST00000458530 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
VPS50-207ENST00000458530 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS50-207ENST00000458530 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
VPS50-207ENST00000458530 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
VPS50-207ENST00000458530 POLR3AO14802 1390 aaPredicted RBP11.93□□□□□ -0.5
VPS50-207ENST00000458530 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
VPS50-207ENST00000458530 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
VPS50-207ENST00000458530 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
VPS50-207ENST00000458530 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
VPS50-207ENST00000458530 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
VPS50-207ENST00000458530 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
VPS50-207ENST00000458530 A0A0G2JS52 829 aa11.92□□□□□ -0.5
VPS50-207ENST00000458530 MYT1Q01538 1121 aa11.92□□□□□ -0.5
VPS50-207ENST00000458530 USP6P35125 1406 aa11.92□□□□□ -0.5
VPS50-207ENST00000458530 TRIM37O94972 964 aa11.91□□□□□ -0.5
VPS50-207ENST00000458530 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
VPS50-207ENST00000458530 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
VPS50-207ENST00000458530 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
VPS50-207ENST00000458530 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
VPS50-207ENST00000458530 ACEP12821 1306 aa11.89□□□□□ -0.51
VPS50-207ENST00000458530 FYB1O15117 783 aa11.89□□□□□ -0.51
VPS50-207ENST00000458530 APBA3O96018 575 aa11.89□□□□□ -0.51
VPS50-207ENST00000458530 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
VPS50-207ENST00000458530 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
VPS50-207ENST00000458530 COG3Q96JB2 828 aa11.88□□□□□ -0.51
VPS50-207ENST00000458530 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
VPS50-207ENST00000458530 PRDM11Q9NQV5 511 aa11.88□□□□□ -0.51
VPS50-207ENST00000458530 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms