RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 VPS37CA5D8V6 355 aaPredicted RBP11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 PES1O00541 588 aaKnown RBP11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
MSC-AS1-201ENST00000457356 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 TAF7LQ5H9L4 462 aa11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 ACEP12821 1306 aa11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 FAM184AQ8NB25 1140 aa11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 NME9Q86XW9 330 aa11.83□□□□□ -0.52
MSC-AS1-201ENST00000457356 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
MSC-AS1-201ENST00000457356 CLSTN1O94985 981 aa11.82□□□□□ -0.52
MSC-AS1-201ENST00000457356 SULT6B1Q6IMI4 303 aa11.82□□□□□ -0.52
MSC-AS1-201ENST00000457356 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
MSC-AS1-201ENST00000457356 ZNF530Q6P9A1 599 aaPredicted RBP11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 SPG7Q9UQ90 795 aa11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 TCOF1Q13428 1488 aaKnown RBP11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 TPM2P07951 284 aa11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 ORAI2Q96SN7 254 aa11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
MSC-AS1-201ENST00000457356 EXOC5O00471 708 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 RIPK4P57078 832 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 GPATCH3Q96I76 525 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 GRPEL1Q9HAV7 217 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 TOMM22Q9NS69 142 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
MSC-AS1-201ENST00000457356 BCAR3O75815 825 aa11.79□□□□□ -0.52
MSC-AS1-201ENST00000457356 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
MSC-AS1-201ENST00000457356 CABP4P57796 275 aa11.79□□□□□ -0.52
MSC-AS1-201ENST00000457356 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
MSC-AS1-201ENST00000457356 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
MSC-AS1-201ENST00000457356 TEX35Q5T0J7 233 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 MCM4P33991 863 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 NPATQ14207 1427 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 GPS2Q13227 327 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 GAS2L2Q8NHY3 880 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
MSC-AS1-201ENST00000457356 SMC3Q9UQE7 1217 aa11.77□□□□□ -0.52
MSC-AS1-201ENST00000457356 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.53
MSC-AS1-201ENST00000457356 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
MSC-AS1-201ENST00000457356 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.53
MSC-AS1-201ENST00000457356 TSPYL4Q9UJ04 414 aa11.77□□□□□ -0.53
MSC-AS1-201ENST00000457356 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
MSC-AS1-201ENST00000457356 ABCC1P33527 1531 aa11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 NEK4P51957 841 aa11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 HECW2Q9P2P5 1572 aa11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 SASS6Q6UVJ0 657 aa11.76□□□□□ -0.53
MSC-AS1-201ENST00000457356 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 USHBP1Q8N6Y0 703 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 FAM177BA6PVY3 158 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 FOSBP53539 338 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 TPD52L1Q16890 204 aaPredicted RBP11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 CCDC27Q2M243 656 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 INTS3Q68E01 1043 aaKnown RBP11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 TRIM5Q9C035 493 aa11.75□□□□□ -0.53
MSC-AS1-201ENST00000457356 SKIDA1Q1XH10 827 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 SETQ01105 290 aaPredicted RBP11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 UQCRHLA0A096LP55 91 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 UQCRHP07919 91 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 HMGN5P82970 282 aaKnown RBP11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
MSC-AS1-201ENST00000457356 TSR1Q2NL82 804 aaKnown RBP11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 MPRIPQ6WCQ1 1025 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 TCP11L2Q8N4U5 519 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 NSD3Q9BZ95 1437 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
MSC-AS1-201ENST00000457356 FIBPO43427 364 aa11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 BTG4Q9NY30 223 aa11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 SCAF11Q99590 1463 aaKnown RBP11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 ARHGEF12Q9NZN5 1544 aa11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
MSC-AS1-201ENST00000457356 API5Q9BZZ5 524 aaKnown RBP11.71□□□□□ -0.53
MSC-AS1-201ENST00000457356 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
MSC-AS1-201ENST00000457356 DDX58O95786 925 aaKnown RBP11.71□□□□□ -0.53
MSC-AS1-201ENST00000457356 SDF4Q9BRK5 362 aa11.71□□□□□ -0.53
MSC-AS1-201ENST00000457356 PDCL3Q9H2J4 239 aa11.71□□□□□ -0.53
MSC-AS1-201ENST00000457356 CDC45O75419 566 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.54
MSC-AS1-201ENST00000457356 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms