RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.34
SYT1-204ENST00000457153 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 RLBP1P12271 317 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 DNTTIP2Q5QJE6 756 aaKnown RBP17.2■□□□□ 0.34
SYT1-204ENST00000457153 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
SYT1-204ENST00000457153 TTC21BQ7Z4L5 1316 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 ATP6V1DQ9Y5K8 247 aa17.2■□□□□ 0.34
SYT1-204ENST00000457153 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
SYT1-204ENST00000457153 ANO2Q9NQ90 1003 aa17.19■□□□□ 0.34
SYT1-204ENST00000457153 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
SYT1-204ENST00000457153 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 DDX58O95786 925 aaKnown RBP17.18■□□□□ 0.34
SYT1-204ENST00000457153 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 NUCB1Q02818 461 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 C9orf78Q9NZ63 289 aaPredicted RBP17.18■□□□□ 0.34
SYT1-204ENST00000457153 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 CWC22Q9HCG8 908 aaKnown RBP17.18■□□□□ 0.34
SYT1-204ENST00000457153 PTPRCP08575 1304 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 HTATSF1O43719 755 aaKnown RBP17.18■□□□□ 0.34
SYT1-204ENST00000457153 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
SYT1-204ENST00000457153 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 PPIP5K1Q6PFW1 1433 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 TPRNQ4KMQ1 711 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
SYT1-204ENST00000457153 ERC2O15083 957 aa17.16■□□□□ 0.34
SYT1-204ENST00000457153 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
SYT1-204ENST00000457153 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
SYT1-204ENST00000457153 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
SYT1-204ENST00000457153 E9PCH4 1651 aa17.15■□□□□ 0.34
SYT1-204ENST00000457153 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
SYT1-204ENST00000457153 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
SYT1-204ENST00000457153 BRPF3Q9ULD4 1205 aa17.15■□□□□ 0.34
SYT1-204ENST00000457153 TNRQ92752 1358 aa17.15■□□□□ 0.34
SYT1-204ENST00000457153 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.34
SYT1-204ENST00000457153 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.34
SYT1-204ENST00000457153 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
SYT1-204ENST00000457153 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
SYT1-204ENST00000457153 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
SYT1-204ENST00000457153 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
SYT1-204ENST00000457153 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
SYT1-204ENST00000457153 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
SYT1-204ENST00000457153 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
SYT1-204ENST00000457153 DCTN1Q14203 1278 aa17.13■□□□□ 0.33
SYT1-204ENST00000457153 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
SYT1-204ENST00000457153 CLASP1Q7Z460 1538 aa17.12■□□□□ 0.33
SYT1-204ENST00000457153 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
SYT1-204ENST00000457153 MCM10Q7L590 875 aa17.12■□□□□ 0.33
SYT1-204ENST00000457153 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
SYT1-204ENST00000457153 RNF17Q9BXT8 1623 aaKnown RBP17.11■□□□□ 0.33
SYT1-204ENST00000457153 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 VAMP4O75379 141 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
SYT1-204ENST00000457153 CFAP65Q6ZU64 1925 aaKnown RBP17.11■□□□□ 0.33
SYT1-204ENST00000457153 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
SYT1-204ENST00000457153 ABCA9Q8IUA7 1624 aa17.1■□□□□ 0.33
SYT1-204ENST00000457153 SURF6O75683 361 aaKnown RBP17.1■□□□□ 0.33
SYT1-204ENST00000457153 ACEP12821 1306 aa17.1■□□□□ 0.33
SYT1-204ENST00000457153 G3BP1Q13283 466 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYT1-204ENST00000457153 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
SYT1-204ENST00000457153 LMTK2Q8IWU2 1503 aa17.1■□□□□ 0.33
SYT1-204ENST00000457153 NEK4P51957 841 aa17.09■□□□□ 0.33
SYT1-204ENST00000457153 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
SYT1-204ENST00000457153 FOXD4L5Q5VV16 416 aaPredicted RBP17.09■□□□□ 0.33
SYT1-204ENST00000457153 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
SYT1-204ENST00000457153 FOXD4L4Q8WXT5 416 aaPredicted RBP17.09■□□□□ 0.33
SYT1-204ENST00000457153 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
SYT1-204ENST00000457153 MBD3O95983 291 aa17.09■□□□□ 0.33
SYT1-204ENST00000457153 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.33
SYT1-204ENST00000457153 KIF3AQ9Y496 699 aa17.08■□□□□ 0.33
SYT1-204ENST00000457153 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.33
SYT1-204ENST00000457153 ABCC3O15438 1527 aa17.08■□□□□ 0.33
SYT1-204ENST00000457153 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
SYT1-204ENST00000457153 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
SYT1-204ENST00000457153 CEP152O94986 1710 aa17.08■□□□□ 0.32
SYT1-204ENST00000457153 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
SYT1-204ENST00000457153 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
SYT1-204ENST00000457153 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
SYT1-204ENST00000457153 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
SYT1-204ENST00000457153 SNX21Q969T3 373 aa17.07■□□□□ 0.32
SYT1-204ENST00000457153 TBC1D9Q6ZT07 1266 aa17.07■□□□□ 0.32
SYT1-204ENST00000457153 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
SYT1-204ENST00000457153 FBLN1P23142 703 aa17.06■□□□□ 0.32
SYT1-204ENST00000457153 SIRT1Q96EB6 747 aa17.06■□□□□ 0.32
SYT1-204ENST00000457153 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
SYT1-204ENST00000457153 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
SYT1-204ENST00000457153 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
SYT1-204ENST00000457153 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
SYT1-204ENST00000457153 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
SYT1-204ENST00000457153 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
SYT1-204ENST00000457153 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
SYT1-204ENST00000457153 NASPP49321 788 aaPredicted RBP17.05■□□□□ 0.32
SYT1-204ENST00000457153 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
SYT1-204ENST00000457153 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms