RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 HMOX1P09601 288 aa27.98■■■□□ 2.07
CTU2-202ENST00000453996 WDR63Q8IWG1 891 aa27.98■■■□□ 2.07
CTU2-202ENST00000453996 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
CTU2-202ENST00000453996 NFAT5O94916 1531 aa27.97■■■□□ 2.07
CTU2-202ENST00000453996 HSP90AB2PQ58FF8 381 aa27.97■■■□□ 2.07
CTU2-202ENST00000453996 SPINK5Q9NQ38 1064 aaPredicted RBP27.97■■■□□ 2.07
CTU2-202ENST00000453996 AMPHP49418 695 aa27.96■■■□□ 2.07
CTU2-202ENST00000453996 XPCQ01831 940 aaPredicted RBP27.96■■■□□ 2.07
CTU2-202ENST00000453996 KRT28Q7Z3Y7 464 aa27.96■■■□□ 2.07
CTU2-202ENST00000453996 ERICH6BQ5W0A0 696 aa27.96■■■□□ 2.07
CTU2-202ENST00000453996 ALS2Q96Q42 1657 aa27.96■■■□□ 2.07
CTU2-202ENST00000453996 SLIT3O75094 1523 aa27.94■■■□□ 2.06
CTU2-202ENST00000453996 RTL1A6NKG5 1358 aa27.93■■■□□ 2.06
CTU2-202ENST00000453996 KCNH5Q8NCM2 988 aa27.92■■■□□ 2.06
CTU2-202ENST00000453996 PHRF1Q9P1Y6 1649 aaKnown RBP27.92■■■□□ 2.06
CTU2-202ENST00000453996 ARHGEF10O15013 1369 aa27.91■■■□□ 2.06
CTU2-202ENST00000453996 RRP1P56182 461 aaKnown RBP27.91■■■□□ 2.06
CTU2-202ENST00000453996 RIPK4P57078 832 aa27.91■■■□□ 2.06
CTU2-202ENST00000453996 HOXC9P31274 260 aa27.9■■■□□ 2.06
CTU2-202ENST00000453996 TRIM35Q9UPQ4 493 aa27.89■■■□□ 2.06
CTU2-202ENST00000453996 NPHP3Q7Z494 1330 aa27.89■■■□□ 2.06
CTU2-202ENST00000453996 PHACTR3Q96KR7 559 aa27.88■■■□□ 2.05
CTU2-202ENST00000453996 NFE2L2Q16236 605 aa27.88■■■□□ 2.05
CTU2-202ENST00000453996 DLG5Q8TDM6 1919 aa27.88■■■□□ 2.05
CTU2-202ENST00000453996 SULT6B1Q6IMI4 303 aa27.87■■■□□ 2.05
CTU2-202ENST00000453996 USP19O94966 1318 aa27.87■■■□□ 2.05
CTU2-202ENST00000453996 LMOD2Q6P5Q4 547 aa27.86■■■□□ 2.05
CTU2-202ENST00000453996 AEBP1Q8IUX7 1158 aa27.85■■■□□ 2.05
CTU2-202ENST00000453996 MYH16Q9H6N6 1097 aa27.85■■■□□ 2.05
CTU2-202ENST00000453996 PXDNQ92626 1479 aa27.85■■■□□ 2.05
CTU2-202ENST00000453996 IL16Q14005 1332 aa27.83■■■□□ 2.05
CTU2-202ENST00000453996 IGSF1Q8N6C5 1336 aa27.82■■■□□ 2.04
CTU2-202ENST00000453996 DDX17Q92841 729 aaKnown RBP27.82■■■□□ 2.04
CTU2-202ENST00000453996 TNS3Q68CZ2 1445 aa27.82■■■□□ 2.04
CTU2-202ENST00000453996 KDRP35968 1356 aa27.82■■■□□ 2.04
CTU2-202ENST00000453996 GCP02774 474 aa27.81■■■□□ 2.04
CTU2-202ENST00000453996 IP6K1Q92551 441 aa27.81■■■□□ 2.04
CTU2-202ENST00000453996 MED1Q15648 1581 aaPredicted RBP27.81■■■□□ 2.04
CTU2-202ENST00000453996 BRINP3Q76B58 766 aa27.81■■■□□ 2.04
CTU2-202ENST00000453996 SLAIN2Q9P270 581 aa27.8■■■□□ 2.04
CTU2-202ENST00000453996 EYA1Q99502 592 aa27.79■■■□□ 2.04
CTU2-202ENST00000453996 LMOD3Q0VAK6 560 aa27.78■■■□□ 2.04
CTU2-202ENST00000453996 PPP4R2Q9NY27 417 aa27.78■■■□□ 2.04
CTU2-202ENST00000453996 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
CTU2-202ENST00000453996 CRYBG1Q9Y4K1 1723 aa27.76■■■□□ 2.03
CTU2-202ENST00000453996 FANCIQ9NVI1 1328 aa27.75■■■□□ 2.03
CTU2-202ENST00000453996 ZBTB7CA1YPR0 619 aa27.75■■■□□ 2.03
CTU2-202ENST00000453996 CALD1Q05682 793 aaKnown RBP27.75■■■□□ 2.03
CTU2-202ENST00000453996 PLEKHG5O94827 1062 aa27.74■■■□□ 2.03
CTU2-202ENST00000453996 LTV1Q96GA3 475 aaPredicted RBP27.74■■■□□ 2.03
CTU2-202ENST00000453996 SPATA31A3Q5VYP0 1347 aa27.74■■■□□ 2.03
CTU2-202ENST00000453996 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.72■■■□□ 2.03
CTU2-202ENST00000453996 TSR2Q969E8 191 aaKnown RBP27.71■■■□□ 2.03
CTU2-202ENST00000453996 NHSL1Q5SYE7 1610 aa27.71■■■□□ 2.03
CTU2-202ENST00000453996 PLIN1O60240 522 aa27.71■■■□□ 2.03
CTU2-202ENST00000453996 RGPD2P0DJD1 1756 aa27.7■■■□□ 2.02
CTU2-202ENST00000453996 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
CTU2-202ENST00000453996 CT47B1P0C2W7 299 aaPredicted RBP27.68■■■□□ 2.02
CTU2-202ENST00000453996 SOS2Q07890 1332 aaPredicted RBP27.68■■■□□ 2.02
CTU2-202ENST00000453996 THUMPD2Q9BTF0 503 aaKnown RBP27.67■■■□□ 2.02
CTU2-202ENST00000453996 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
CTU2-202ENST00000453996 CAMTA1Q9Y6Y1 1673 aa27.66■■■□□ 2.02
CTU2-202ENST00000453996 IFT57Q9NWB7 429 aa27.65■■■□□ 2.02
CTU2-202ENST00000453996 ABCC6O95255 1503 aa27.65■■■□□ 2.02
CTU2-202ENST00000453996 BCAR3O75815 825 aa27.65■■■□□ 2.02
CTU2-202ENST00000453996 GNAI1P63096 354 aa27.65■■■□□ 2.02
CTU2-202ENST00000453996 FAM83GA6ND36 823 aa27.64■■■□□ 2.02
CTU2-202ENST00000453996 RARSP54136 660 aaKnown RBP27.64■■■□□ 2.02
CTU2-202ENST00000453996 EXOSC9Q06265 439 aaKnown RBP27.64■■■□□ 2.02
CTU2-202ENST00000453996 GAS2L2Q8NHY3 880 aa27.64■■■□□ 2.02
CTU2-202ENST00000453996 ZC3H6P61129 1189 aaKnown RBP27.63■■■□□ 2.01
CTU2-202ENST00000453996 MTHFSDQ2M296 383 aaKnown RBP27.63■■■□□ 2.01
CTU2-202ENST00000453996 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
CTU2-202ENST00000453996 COL18A1P39060 1754 aa27.63■■■□□ 2.01
CTU2-202ENST00000453996 LAS1LQ9Y4W2 734 aaKnown RBP27.63■■■□□ 2.01
CTU2-202ENST00000453996 NBPF6Q5VWK0 638 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 USHBP1Q8N6Y0 703 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 EXOC6Q8TAG9 804 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 ANKRD24Q8TF21 1146 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 NBPF4Q96M43 638 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 NCAPD2Q15021 1401 aa27.62■■■□□ 2.01
CTU2-202ENST00000453996 ZNF853P0CG23 659 aa27.61■■■□□ 2.01
CTU2-202ENST00000453996 DCTN1Q14203 1278 aa27.6■■■□□ 2.01
CTU2-202ENST00000453996 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
CTU2-202ENST00000453996 CFAP44Q96MT7 982 aa27.6■■■□□ 2.01
CTU2-202ENST00000453996 ABCA3Q99758 1704 aa27.6■■■□□ 2.01
CTU2-202ENST00000453996 AXIN2Q9Y2T1 843 aa27.59■■■□□ 2.01
CTU2-202ENST00000453996 C20orf194Q5TEA3 1177 aa27.58■■■□□ 2.01
CTU2-202ENST00000453996 B4GALNT3Q6L9W6 998 aa27.58■■■□□ 2.01
CTU2-202ENST00000453996 LRRC59Q96AG4 307 aaKnown RBP27.58■■■□□ 2.01
CTU2-202ENST00000453996 CPDO75976 1380 aa27.58■■■□□ 2.01
CTU2-202ENST00000453996 LMO7Q8WWI1 1683 aa27.58■■■□□ 2.01
CTU2-202ENST00000453996 FAM208AQ9UK61 1670 aaKnown RBP27.58■■■□□ 2.01
CTU2-202ENST00000453996 CRBNQ96SW2 442 aa27.58■■■□□ 2
CTU2-202ENST00000453996 LRRC37A3O60309 1634 aa27.57■■■□□ 2
CTU2-202ENST00000453996 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
CTU2-202ENST00000453996 ROBO1Q9Y6N7 1651 aa27.57■■■□□ 2
CTU2-202ENST00000453996 MCM10Q7L590 875 aa27.56■■■□□ 2
CTU2-202ENST00000453996 MBIPQ9NS73 344 aa27.56■■■□□ 2
CTU2-202ENST00000453996 ERBB3P21860 1342 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms