RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
UBE2D3-210ENST00000453744 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 TSC1Q92574 1164 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 VAMP4O75379 141 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 PHF14O94880 888 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 KCNJ4P48050 445 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 PLEKHM2Q8IWE5 1019 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 C8orf58Q8NAV2 365 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 LMBRD1Q9NUN5 540 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 MIS18AQ9NYP9 233 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 USP25Q9UHP3 1055 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 ZKSCAN5Q9Y2L8 839 aa16.86■□□□□ 0.29
UBE2D3-210ENST00000453744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 TTC22Q5TAA0 569 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 SPC24Q8NBT2 197 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 SYNMO15061 1565 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 FIBPO43427 364 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 MRPL50Q8N5N7 158 aaKnown RBP16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 DTNBO60941 627 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 PPP1R9BQ96SB3 815 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
UBE2D3-210ENST00000453744 CBX1P83916 185 aa16.84■□□□□ 0.29
UBE2D3-210ENST00000453744 GOLGA6L4A6NEF3 574 aa16.84■□□□□ 0.29
UBE2D3-210ENST00000453744 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
UBE2D3-210ENST00000453744 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-210ENST00000453744 TMEM63CQ9P1W3 806 aa16.83■□□□□ 0.29
UBE2D3-210ENST00000453744 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 MLECQ14165 292 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 KIF2CQ99661 725 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 USP26Q9BXU7 913 aa16.83■□□□□ 0.28
UBE2D3-210ENST00000453744 F6X3S4 739 aa16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 NOL7Q9UMY1 257 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 C17orf53Q8N3J3 647 aaPredicted RBP16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
UBE2D3-210ENST00000453744 COG3Q96JB2 828 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 TTC12Q9H892 705 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 ATP10AO60312 1499 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 MCM10Q7L590 875 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 IL16Q14005 1332 aa16.81■□□□□ 0.28
UBE2D3-210ENST00000453744 MEIS3Q99687 375 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 VPS37CA5D8V6 355 aaPredicted RBP16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 ZNF445P59923 1031 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 GPT2Q8TD30 523 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
UBE2D3-210ENST00000453744 FKBP5Q13451 457 aaPredicted RBP16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 SULT6B1Q6IMI4 303 aa16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 PLCH2O75038 1416 aa16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 ZNF428Q96B54 188 aa16.79■□□□□ 0.28
UBE2D3-210ENST00000453744 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 CLASP1Q7Z460 1538 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 WAPLQ7Z5K2 1190 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 PPIP5K1Q6PFW1 1433 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 MTERF4Q7Z6M4 381 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
UBE2D3-210ENST00000453744 ABCA8O94911 1581 aa16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 NME9Q86XW9 330 aa16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 ZNF592Q92610 1267 aa16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 RPAP2Q8IXW5 612 aaPredicted RBP16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-210ENST00000453744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.77■□□□□ 0.284e-6■□□□□ 11
UBE2D3-210ENST00000453744 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.27
UBE2D3-210ENST00000453744 IFT57Q9NWB7 429 aa16.77■□□□□ 0.27
UBE2D3-210ENST00000453744 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 ZNF518AQ6AHZ1 1483 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 IGSF3O75054 1194 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
UBE2D3-210ENST00000453744 PODXL2Q9NZ53 605 aa16.75■□□□□ 0.27
UBE2D3-210ENST00000453744 IDI1Q13907 227 aa16.74■□□□□ 0.27
UBE2D3-210ENST00000453744 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
UBE2D3-210ENST00000453744 ADCY5O95622 1261 aa16.74■□□□□ 0.27
UBE2D3-210ENST00000453744 DDIT3P35638 169 aa16.74■□□□□ 0.27
UBE2D3-210ENST00000453744 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
UBE2D3-210ENST00000453744 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-210ENST00000453744 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms