RNA–Protein interactions for RNA: ENST00000452575.1

SHROOM2-203, Transcript of shroom family member 2, humanhuman

TSL 5

Gene SHROOM2, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-203ENST00000452575 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 CDK12Q9NYV4 1490 aaPredicted RBP22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 COG6Q9Y2V7 657 aa22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 PHACTR3Q96KR7 559 aa22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 AKAP12Q02952 1782 aa22.43■■□□□ 1.18
SHROOM2-203ENST00000452575 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
SHROOM2-203ENST00000452575 CT47B1P0C2W7 299 aaPredicted RBP22.41■■□□□ 1.18
SHROOM2-203ENST00000452575 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
SHROOM2-203ENST00000452575 RGS3P49796 1198 aa22.41■■□□□ 1.18
SHROOM2-203ENST00000452575 USP6P35125 1406 aa22.4■■□□□ 1.18
SHROOM2-203ENST00000452575 TNNQ9UQP3 1299 aa22.4■■□□□ 1.18
SHROOM2-203ENST00000452575 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
SHROOM2-203ENST00000452575 RLBP1P12271 317 aa22.39■■□□□ 1.17
SHROOM2-203ENST00000452575 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
SHROOM2-203ENST00000452575 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
SHROOM2-203ENST00000452575 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
SHROOM2-203ENST00000452575 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
SHROOM2-203ENST00000452575 UBE2Q2Q8WVN8 375 aa22.37■■□□□ 1.17
SHROOM2-203ENST00000452575 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
SHROOM2-203ENST00000452575 KCNA6P17658 529 aa22.37■■□□□ 1.17
SHROOM2-203ENST00000452575 FAM43AQ8N2R8 423 aa22.36■■□□□ 1.17
SHROOM2-203ENST00000452575 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
SHROOM2-203ENST00000452575 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
SHROOM2-203ENST00000452575 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
SHROOM2-203ENST00000452575 CEP170BQ9Y4F5 1589 aaPredicted RBP22.35■■□□□ 1.17
SHROOM2-203ENST00000452575 IGHDP01880 384 aa22.35■■□□□ 1.17
SHROOM2-203ENST00000452575 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
SHROOM2-203ENST00000452575 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.17
SHROOM2-203ENST00000452575 SMC4Q9NTJ3 1288 aa22.33■■□□□ 1.17
SHROOM2-203ENST00000452575 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.16
SHROOM2-203ENST00000452575 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
SHROOM2-203ENST00000452575 EIF4A2Q14240 407 aaKnown RBP22.32■■□□□ 1.16
SHROOM2-203ENST00000452575 THUMPD2Q9BTF0 503 aaKnown RBP22.32■■□□□ 1.16
SHROOM2-203ENST00000452575 PIK3R4Q99570 1358 aa22.32■■□□□ 1.16
SHROOM2-203ENST00000452575 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
SHROOM2-203ENST00000452575 USP31Q70CQ4 1352 aa22.31■■□□□ 1.16
SHROOM2-203ENST00000452575 VIRMAQ69YN4 1812 aaKnown RBP22.31■■□□□ 1.16
SHROOM2-203ENST00000452575 ANKLE2Q86XL3 938 aa22.31■■□□□ 1.16
SHROOM2-203ENST00000452575 AAMPQ13685 434 aa22.3■■□□□ 1.16
SHROOM2-203ENST00000452575 TTC21AQ8NDW8 1320 aa22.3■■□□□ 1.16
SHROOM2-203ENST00000452575 RIMS1Q86UR5 1692 aaKnown RBP22.3■■□□□ 1.16
SHROOM2-203ENST00000452575 USP19O94966 1318 aa22.29■■□□□ 1.16
SHROOM2-203ENST00000452575 SOX12O15370 315 aa22.29■■□□□ 1.16
SHROOM2-203ENST00000452575 HSP90AB2PQ58FF8 381 aa22.28■■□□□ 1.16
SHROOM2-203ENST00000452575 DZIP1LQ8IYY4 767 aaKnown RBP22.28■■□□□ 1.16
SHROOM2-203ENST00000452575 CALD1Q05682 793 aaKnown RBP22.28■■□□□ 1.16
SHROOM2-203ENST00000452575 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
SHROOM2-203ENST00000452575 MVPQ14764 893 aaKnown RBP22.27■■□□□ 1.16
SHROOM2-203ENST00000452575 FTSJ3Q8IY81 847 aaKnown RBP22.27■■□□□ 1.16
SHROOM2-203ENST00000452575 PCDHB15Q9Y5E8 787 aa22.27■■□□□ 1.16
SHROOM2-203ENST00000452575 TRIM27P14373 513 aa22.27■■□□□ 1.16
SHROOM2-203ENST00000452575 SULT6B1Q6IMI4 303 aa22.27■■□□□ 1.16
SHROOM2-203ENST00000452575 NOB1Q9ULX3 412 aaKnown RBP22.26■■□□□ 1.15
SHROOM2-203ENST00000452575 IFT57Q9NWB7 429 aa22.25■■□□□ 1.15
SHROOM2-203ENST00000452575 ANKARQ7Z5J8 1434 aa22.25■■□□□ 1.15
SHROOM2-203ENST00000452575 ZNF853P0CG23 659 aa22.24■■□□□ 1.15
SHROOM2-203ENST00000452575 GNAI1P63096 354 aa22.24■■□□□ 1.15
SHROOM2-203ENST00000452575 LMOD3Q0VAK6 560 aa22.24■■□□□ 1.15
SHROOM2-203ENST00000452575 ATF7IPQ6VMQ6 1270 aa22.24■■□□□ 1.15
SHROOM2-203ENST00000452575 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
SHROOM2-203ENST00000452575 FAM83GA6ND36 823 aa22.23■■□□□ 1.15
SHROOM2-203ENST00000452575 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
SHROOM2-203ENST00000452575 C14orf37Q86TY3 774 aa22.23■■□□□ 1.15
SHROOM2-203ENST00000452575 MBIPQ9NS73 344 aa22.22■■□□□ 1.15
SHROOM2-203ENST00000452575 PLCB2Q00722 1185 aa22.22■■□□□ 1.15
SHROOM2-203ENST00000452575 BECN1Q14457 450 aa22.22■■□□□ 1.15
SHROOM2-203ENST00000452575 NALCNQ8IZF0 1738 aa22.22■■□□□ 1.15
SHROOM2-203ENST00000452575 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
SHROOM2-203ENST00000452575 DCTN1Q14203 1278 aa22.21■■□□□ 1.15
SHROOM2-203ENST00000452575 VAMP4O75379 141 aa22.2■■□□□ 1.15
SHROOM2-203ENST00000452575 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.15
SHROOM2-203ENST00000452575 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.15
SHROOM2-203ENST00000452575 CFAP44Q96MT7 982 aa22.2■■□□□ 1.15
SHROOM2-203ENST00000452575 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
SHROOM2-203ENST00000452575 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
SHROOM2-203ENST00000452575 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
SHROOM2-203ENST00000452575 RGPD8O14715 1765 aaPredicted RBP22.19■■□□□ 1.14
SHROOM2-203ENST00000452575 SEC24BO95487 1268 aa22.19■■□□□ 1.14
SHROOM2-203ENST00000452575 ADAMTSL3P82987 1691 aa22.19■■□□□ 1.14
SHROOM2-203ENST00000452575 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
SHROOM2-203ENST00000452575 NLRP6P59044 892 aa22.19■■□□□ 1.14
SHROOM2-203ENST00000452575 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
SHROOM2-203ENST00000452575 SBNO1A3KN83 1393 aa22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 BRPF1P55201 1214 aaPredicted RBP22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 RWDD1Q9H446 243 aaPredicted RBP22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 DDX19BQ9UMR2 479 aa22.17■■□□□ 1.14
SHROOM2-203ENST00000452575 FLT4P35916 1363 aa22.16■■□□□ 1.14
SHROOM2-203ENST00000452575 ELL2O00472 640 aaPredicted RBP22.16■■□□□ 1.14
SHROOM2-203ENST00000452575 SLKQ9H2G2 1235 aaPredicted RBP22.16■■□□□ 1.14
SHROOM2-203ENST00000452575 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
SHROOM2-203ENST00000452575 AMPHP49418 695 aa22.15■■□□□ 1.14
SHROOM2-203ENST00000452575 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
SHROOM2-203ENST00000452575 L1TD1Q5T7N2 865 aaKnown RBP22.15■■□□□ 1.14
SHROOM2-203ENST00000452575 MRPL50Q8N5N7 158 aaKnown RBP22.14■■□□□ 1.14
SHROOM2-203ENST00000452575 C8orf58Q8NAV2 365 aa22.14■■□□□ 1.14
SHROOM2-203ENST00000452575 FBXO3Q9UK99 471 aa22.14■■□□□ 1.14
SHROOM2-203ENST00000452575 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms