RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 ACEP12821 1306 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 IL13P35225 146 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 PDE3AQ14432 1141 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 ZNF772Q68DY9 489 aaPredicted RBP11.16□□□□□ -0.62
DDB1-203ENST00000451943 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
DDB1-203ENST00000451943 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
DDB1-203ENST00000451943 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
DDB1-203ENST00000451943 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
DDB1-203ENST00000451943 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
DDB1-203ENST00000451943 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
DDB1-203ENST00000451943 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
DDB1-203ENST00000451943 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
DDB1-203ENST00000451943 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
DDB1-203ENST00000451943 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
DDB1-203ENST00000451943 C20orf194Q5TEA3 1177 aa11.14□□□□□ -0.63
DDB1-203ENST00000451943 ORAI2Q96SN7 254 aa11.14□□□□□ -0.63
DDB1-203ENST00000451943 NALCNQ8IZF0 1738 aa11.14□□□□□ -0.63
DDB1-203ENST00000451943 BCAR3O75815 825 aa11.13□□□□□ -0.63
DDB1-203ENST00000451943 RARSP54136 660 aaKnown RBP11.13□□□□□ -0.63
DDB1-203ENST00000451943 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
DDB1-203ENST00000451943 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
DDB1-203ENST00000451943 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
DDB1-203ENST00000451943 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
DDB1-203ENST00000451943 AAMPQ13685 434 aa11.12□□□□□ -0.63
DDB1-203ENST00000451943 FMN2Q9NZ56 1722 aa11.12□□□□□ -0.63
DDB1-203ENST00000451943 KDM2BQ8NHM5 1336 aa11.11□□□□□ -0.63
DDB1-203ENST00000451943 TCERG1O14776 1098 aaKnown RBP11.11□□□□□ -0.63
DDB1-203ENST00000451943 NEFMP07197 916 aa11.11□□□□□ -0.63
DDB1-203ENST00000451943 FBLN1P23142 703 aa11.11□□□□□ -0.63
DDB1-203ENST00000451943 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
DDB1-203ENST00000451943 RIPK4P57078 832 aa11.11□□□□□ -0.63
DDB1-203ENST00000451943 AFF2P51816 1311 aa11.1□□□□□ -0.63
DDB1-203ENST00000451943 FANCIQ9NVI1 1328 aa11.1□□□□□ -0.63
DDB1-203ENST00000451943 RXRBP28702 533 aa11.1□□□□□ -0.63
DDB1-203ENST00000451943 NFE2L2Q16236 605 aa11.1□□□□□ -0.63
DDB1-203ENST00000451943 CENPQQ7L2Z9 268 aaPredicted RBP11.1□□□□□ -0.63
DDB1-203ENST00000451943 USP54Q70EL1 1684 aa11.1□□□□□ -0.63
DDB1-203ENST00000451943 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
DDB1-203ENST00000451943 MS4A1P11836 297 aa11.09□□□□□ -0.63
DDB1-203ENST00000451943 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
DDB1-203ENST00000451943 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
DDB1-203ENST00000451943 KIF24Q5T7B8 1368 aa11.08□□□□□ -0.64
DDB1-203ENST00000451943 ESCO1Q5FWF5 840 aa11.08□□□□□ -0.64
DDB1-203ENST00000451943 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
DDB1-203ENST00000451943 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
DDB1-203ENST00000451943 LMOD3Q0VAK6 560 aa11.07□□□□□ -0.64
DDB1-203ENST00000451943 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
DDB1-203ENST00000451943 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
DDB1-203ENST00000451943 RGPD1P0DJD0 1748 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 FOXO3O43524 673 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 ADAMTS2O95450 1211 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 BRPF1P55201 1214 aaPredicted RBP11.06□□□□□ -0.64
DDB1-203ENST00000451943 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
DDB1-203ENST00000451943 EIF4A2Q14240 407 aaKnown RBP11.06□□□□□ -0.64
DDB1-203ENST00000451943 PMFBP1Q8TBY8 1022 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 UPF1Q92900 1129 aaKnown RBP eCLIP11.06□□□□□ -0.644e-14■■■■□ 25.6
DDB1-203ENST00000451943 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
DDB1-203ENST00000451943 PIK3C2AO00443 1686 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 HMOX1P09601 288 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 ZNF853P0CG23 659 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
DDB1-203ENST00000451943 ALDH1L2Q3SY69 923 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
DDB1-203ENST00000451943 TSR2Q969E8 191 aaKnown RBP11.05□□□□□ -0.64
DDB1-203ENST00000451943 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 RGPD8O14715 1765 aaPredicted RBP11.05□□□□□ -0.64
DDB1-203ENST00000451943 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
DDB1-203ENST00000451943 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
DDB1-203ENST00000451943 FLT4P35916 1363 aa11.04□□□□□ -0.64
DDB1-203ENST00000451943 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
DDB1-203ENST00000451943 GNAI1P63096 354 aa11.04□□□□□ -0.64
DDB1-203ENST00000451943 CLUAP1Q96AJ1 413 aa11.04□□□□□ -0.64
DDB1-203ENST00000451943 MAP3K19Q56UN5 1328 aa11.04□□□□□ -0.64
DDB1-203ENST00000451943 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
DDB1-203ENST00000451943 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
DDB1-203ENST00000451943 PANK1Q8TE04 598 aa11.03□□□□□ -0.64
DDB1-203ENST00000451943 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
DDB1-203ENST00000451943 KDRP35968 1356 aa11.03□□□□□ -0.64
DDB1-203ENST00000451943 PXDNQ92626 1479 aa11.02□□□□□ -0.65
DDB1-203ENST00000451943 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
DDB1-203ENST00000451943 HSP90AB2PQ58FF8 381 aa11.02□□□□□ -0.65
DDB1-203ENST00000451943 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
DDB1-203ENST00000451943 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
DDB1-203ENST00000451943 USP21Q9UK80 565 aa11.02□□□□□ -0.65
DDB1-203ENST00000451943 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
DDB1-203ENST00000451943 RLBP1P12271 317 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 RTL1A6NKG5 1358 aa11.01□□□□□ -0.65
DDB1-203ENST00000451943 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms