RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 LNPKQ9C0E8 428 aa27.99■■■□□ 2.07
TTC3-210ENST00000450533 FAM83GA6ND36 823 aa27.98■■■□□ 2.07
TTC3-210ENST00000450533 GNAI1P63096 354 aa27.98■■■□□ 2.07
TTC3-210ENST00000450533 MRPL50Q8N5N7 158 aaKnown RBP27.98■■■□□ 2.07
TTC3-210ENST00000450533 C1orf115Q9H7X2 142 aa27.98■■■□□ 2.07
TTC3-210ENST00000450533 CDK12Q9NYV4 1490 aaPredicted RBP27.98■■■□□ 2.07
TTC3-210ENST00000450533 CALD1Q05682 793 aaKnown RBP27.98■■■□□ 2.07
TTC3-210ENST00000450533 SPRYD3Q8NCJ5 442 aa27.97■■■□□ 2.07
TTC3-210ENST00000450533 C22orf23Q9BZE7 217 aa27.97■■■□□ 2.07
TTC3-210ENST00000450533 IFT57Q9NWB7 429 aa27.97■■■□□ 2.07
TTC3-210ENST00000450533 ZNF428Q96B54 188 aa27.97■■■□□ 2.07
TTC3-210ENST00000450533 AATKQ6ZMQ8 1374 aa27.96■■■□□ 2.07
TTC3-210ENST00000450533 NUCB1Q02818 461 aa27.96■■■□□ 2.07
TTC3-210ENST00000450533 DCTN1Q14203 1278 aa27.96■■■□□ 2.07
TTC3-210ENST00000450533 ANTXR1Q9H6X2 564 aa27.96■■■□□ 2.07
TTC3-210ENST00000450533 PRR36Q9H6K5 1346 aa27.95■■■□□ 2.07
TTC3-210ENST00000450533 BRPF1P55201 1214 aaPredicted RBP27.95■■■□□ 2.07
TTC3-210ENST00000450533 ZBTB7BO15156 539 aaPredicted RBP27.95■■■□□ 2.06
TTC3-210ENST00000450533 ZNF853P0CG23 659 aa27.94■■■□□ 2.06
TTC3-210ENST00000450533 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
TTC3-210ENST00000450533 TWISTNBQ3B726 338 aaPredicted RBP27.93■■■□□ 2.06
TTC3-210ENST00000450533 C8orf58Q8NAV2 365 aa27.93■■■□□ 2.06
TTC3-210ENST00000450533 CHD1LQ86WJ1 897 aa27.92■■■□□ 2.06
TTC3-210ENST00000450533 CFAP44Q96MT7 982 aa27.91■■■□□ 2.06
TTC3-210ENST00000450533 BRPF3Q9ULD4 1205 aa27.91■■■□□ 2.06
TTC3-210ENST00000450533 RTN4Q9NQC3 1192 aaKnown RBP27.9■■■□□ 2.06
TTC3-210ENST00000450533 MON2Q7Z3U7 1717 aa27.9■■■□□ 2.06
TTC3-210ENST00000450533 HDGFP51858 240 aaKnown RBP27.9■■■□□ 2.06
TTC3-210ENST00000450533 ARHGAP45Q92619 1136 aa27.9■■■□□ 2.06
TTC3-210ENST00000450533 DLG5Q8TDM6 1919 aa27.89■■■□□ 2.06
TTC3-210ENST00000450533 PTCH1Q13635 1447 aa27.89■■■□□ 2.06
TTC3-210ENST00000450533 AEBP1Q8IUX7 1158 aa27.89■■■□□ 2.06
TTC3-210ENST00000450533 ROBO2Q9HCK4 1378 aa27.89■■■□□ 2.05
TTC3-210ENST00000450533 ANKRD45Q5TZF3 282 aa27.89■■■□□ 2.05
TTC3-210ENST00000450533 TECPR2O15040 1411 aa27.88■■■□□ 2.05
TTC3-210ENST00000450533 LMOD3Q0VAK6 560 aa27.88■■■□□ 2.05
TTC3-210ENST00000450533 TNRQ92752 1358 aa27.87■■■□□ 2.05
TTC3-210ENST00000450533 SIRT1Q96EB6 747 aa27.87■■■□□ 2.05
TTC3-210ENST00000450533 ZNF692Q9BU19 519 aaPredicted RBP27.87■■■□□ 2.05
TTC3-210ENST00000450533 PIK3R4Q99570 1358 aa27.85■■■□□ 2.05
TTC3-210ENST00000450533 C3P01024 1663 aa27.85■■■□□ 2.05
TTC3-210ENST00000450533 KNDC1Q76NI1 1749 aa27.85■■■□□ 2.05
TTC3-210ENST00000450533 ABCC4O15439 1325 aa27.85■■■□□ 2.05
TTC3-210ENST00000450533 SULT6B1Q6IMI4 303 aa27.85■■■□□ 2.05
TTC3-210ENST00000450533 TMEM2Q9UHN6 1383 aa27.84■■■□□ 2.05
TTC3-210ENST00000450533 EIF4A2Q14240 407 aaKnown RBP27.84■■■□□ 2.05
TTC3-210ENST00000450533 SIRT2Q8IXJ6 389 aa27.84■■■□□ 2.05
TTC3-210ENST00000450533 ITSN1Q15811 1721 aa27.84■■■□□ 2.05
TTC3-210ENST00000450533 AKAP12Q02952 1782 aa27.84■■■□□ 2.05
TTC3-210ENST00000450533 SOX12O15370 315 aa27.82■■■□□ 2.04
TTC3-210ENST00000450533 ACEP12821 1306 aa27.82■■■□□ 2.04
TTC3-210ENST00000450533 CHMP4BQ9H444 224 aaKnown RBP27.82■■■□□ 2.04
TTC3-210ENST00000450533 TTC21BQ7Z4L5 1316 aa27.81■■■□□ 2.04
TTC3-210ENST00000450533 KRT24Q2M2I5 525 aa27.81■■■□□ 2.04
TTC3-210ENST00000450533 GCC1Q96CN9 775 aa27.81■■■□□ 2.04
TTC3-210ENST00000450533 ADAMTS13Q76LX8 1427 aa27.78■■■□□ 2.04
TTC3-210ENST00000450533 LTKP29376 864 aa27.78■■■□□ 2.04
TTC3-210ENST00000450533 BMP2KLQ5H9B9 411 aa27.78■■■□□ 2.04
TTC3-210ENST00000450533 API5Q9BZZ5 524 aaKnown RBP27.78■■■□□ 2.04
TTC3-210ENST00000450533 HSP90AB2PQ58FF8 381 aa27.78■■■□□ 2.04
TTC3-210ENST00000450533 MCM10Q7L590 875 aa27.78■■■□□ 2.04
TTC3-210ENST00000450533 SLC26A8Q96RN1 970 aa27.77■■■□□ 2.04
TTC3-210ENST00000450533 UBR1Q8IWV7 1749 aa27.76■■■□□ 2.03
TTC3-210ENST00000450533 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.76■■■□□ 2.03
TTC3-210ENST00000450533 HSCBQ8IWL3 235 aa27.75■■■□□ 2.03
TTC3-210ENST00000450533 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
TTC3-210ENST00000450533 RBM25P49756 843 aaKnown RBP27.74■■■□□ 2.03
TTC3-210ENST00000450533 NRKQ7Z2Y5 1582 aa27.72■■■□□ 2.03
TTC3-210ENST00000450533 CEBPAP49715 358 aaPredicted RBP27.72■■■□□ 2.03
TTC3-210ENST00000450533 OVOS2A0A0J9YW53 1432 aa27.72■■■□□ 2.03
TTC3-210ENST00000450533 OVOS2Q6IE36 1432 aa27.72■■■□□ 2.03
TTC3-210ENST00000450533 PLEKHG3A1L390 1219 aa27.7■■■□□ 2.03
TTC3-210ENST00000450533 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.03
TTC3-210ENST00000450533 USP6P35125 1406 aa27.7■■■□□ 2.03
TTC3-210ENST00000450533 CHMP5Q9NZZ3 219 aa27.7■■■□□ 2.02
TTC3-210ENST00000450533 TBC1D9Q6ZT07 1266 aa27.69■■■□□ 2.02
TTC3-210ENST00000450533 CHL1O00533 1208 aa27.69■■■□□ 2.02
TTC3-210ENST00000450533 PEAK1Q9H792 1746 aa27.67■■■□□ 2.02
TTC3-210ENST00000450533 MIS18AQ9NYP9 233 aa27.67■■■□□ 2.02
TTC3-210ENST00000450533 MCM4P33991 863 aa27.67■■■□□ 2.02
TTC3-210ENST00000450533 PLEKHG1Q9ULL1 1385 aa27.67■■■□□ 2.02
TTC3-210ENST00000450533 PTPRUQ92729 1446 aa27.66■■■□□ 2.02
TTC3-210ENST00000450533 FOXO3O43524 673 aa27.65■■■□□ 2.02
TTC3-210ENST00000450533 TOPAZ1Q8N9V7 1692 aa27.65■■■□□ 2.02
TTC3-210ENST00000450533 INTS3Q68E01 1043 aaKnown RBP27.65■■■□□ 2.02
TTC3-210ENST00000450533 KIF2CQ99661 725 aa27.64■■■□□ 2.01
TTC3-210ENST00000450533 RGS12O14924 1447 aa27.63■■■□□ 2.01
TTC3-210ENST00000450533 MAP3K19Q56UN5 1328 aa27.63■■■□□ 2.01
TTC3-210ENST00000450533 GSPT1P15170 499 aaKnown RBP27.62■■■□□ 2.01
TTC3-210ENST00000450533 C16orf71Q8IYS4 520 aaPredicted RBP27.62■■■□□ 2.01
TTC3-210ENST00000450533 DCTPP1Q9H773 170 aa27.62■■■□□ 2.01
TTC3-210ENST00000450533 AMOTL2Q9Y2J4 779 aa27.62■■■□□ 2.01
TTC3-210ENST00000450533 SNX21Q969T3 373 aa27.62■■■□□ 2.01
TTC3-210ENST00000450533 KIF24Q5T7B8 1368 aa27.62■■■□□ 2.01
TTC3-210ENST00000450533 PLEKHM2Q8IWE5 1019 aa27.61■■■□□ 2.01
TTC3-210ENST00000450533 USP31Q70CQ4 1352 aa27.61■■■□□ 2.01
TTC3-210ENST00000450533 ARXQ96QS3 562 aa27.6■■■□□ 2.01
TTC3-210ENST00000450533 GZF1Q9H116 711 aaPredicted RBP27.6■■■□□ 2.01
TTC3-210ENST00000450533 MSH6P52701 1360 aa27.6■■■□□ 2.01
TTC3-210ENST00000450533 CD2BP2O95400 341 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms