RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 HIP1O00291 1037 aa15.19■□□□□ 0.02
AC006001.3-201ENST00000449307 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
AC006001.3-201ENST00000449307 CUX1P39880 1505 aa15.19■□□□□ 0.02
AC006001.3-201ENST00000449307 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 EXOC5O00471 708 aa15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 TRIM21P19474 475 aaKnown RBP15.18■□□□□ 0.02
AC006001.3-201ENST00000449307 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 SEPT11Q9NVA2 429 aaKnown RBP15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 C8orf37Q96NL8 207 aa15.17■□□□□ 0.02
AC006001.3-201ENST00000449307 UBAC1Q9BSL1 405 aa15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 CEP126Q9P2H0 1117 aa15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
AC006001.3-201ENST00000449307 RFC4P35249 363 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 SKOR2Q2VWA4 1001 aaPredicted RBP15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 KCNH5Q8NCM2 988 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 SLC52A1Q9NWF4 448 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 TNIP1Q15025 636 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 AACSQ86V21 672 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 NAT10Q9H0A0 1025 aaKnown RBP15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 FOXO3O43524 673 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 SRCIN1Q9C0H9 1055 aa15.15■□□□□ 0.02
AC006001.3-201ENST00000449307 PPP4R3AQ6IN85 833 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 TOM1O60784 492 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 CDC45O75419 566 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 EXOSC9Q06265 439 aaKnown RBP15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 MKNK2Q9HBH9 465 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 ERBINQ96RT1 1412 aa15.14■□□□□ 0.01
AC006001.3-201ENST00000449307 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 NEFHP12036 1026 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 CCDC96Q2M329 555 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 CHMP5Q9NZZ3 219 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 DESP17661 470 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 NOB1Q9ULX3 412 aaKnown RBP15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 NESP48681 1621 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 CDR1P51861 262 aa15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
AC006001.3-201ENST00000449307 FILIP1LQ4L180 1135 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 NUDT16Q96DE0 195 aaKnown RBP15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 FEZ1Q99689 392 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 ANKRD62A6NC57 917 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 AIDAQ96BJ3 306 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 MIS18AQ9NYP9 233 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 STK38Q15208 465 aa15.12■□□□□ 0.01
AC006001.3-201ENST00000449307 SMC2O95347 1197 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 GNAT3A8MTJ3 354 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 PDE4AP27815 886 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 SEC63Q9UGP8 760 aaKnown RBP15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 MYO6Q9UM54 1294 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 LIG1P18858 919 aa15.11■□□□□ 0.01
AC006001.3-201ENST00000449307 IGF1RP08069 1367 aa15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 SSR1P43307 286 aaKnown RBP15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 ST5P78524 1137 aa15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 MYD88Q99836 296 aa15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 TRMT1LQ7Z2T5 733 aaKnown RBP15.1■□□□□ 0.01
AC006001.3-201ENST00000449307 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 GPTP24298 496 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 ZNF396Q96N95 335 aaPredicted RBP15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 MYO1BO43795 1136 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 KINO60870 393 aaKnown RBP15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 STIM1Q13586 685 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 SMARCE1Q969G3 411 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 DNAI2Q9GZS0 605 aa15.09■□□□□ 0.01
AC006001.3-201ENST00000449307 IFIT1P09914 478 aaKnown RBP15.08■□□□□ 0.01
AC006001.3-201ENST00000449307 POLD1P28340 1107 aa15.08■□□□□ 0.01
AC006001.3-201ENST00000449307 IFT140Q96RY7 1462 aa15.08■□□□□ 0
AC006001.3-201ENST00000449307 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
AC006001.3-201ENST00000449307 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
AC006001.3-201ENST00000449307 SRGAP3O43295 1099 aa15.08■□□□□ 0
AC006001.3-201ENST00000449307 DEF6Q9H4E7 631 aa15.08■□□□□ 0
AC006001.3-201ENST00000449307 TTC16Q8NEE8 873 aa15.07■□□□□ 0
AC006001.3-201ENST00000449307 MNS1Q8NEH6 495 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms