RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 COL3A1P02461 1466 aaPredicted RBP25.33■■□□□ 1.65
SMARCD2-203ENST00000448276 ADGRB3O60242 1522 aa25.33■■□□□ 1.65
SMARCD2-203ENST00000448276 XPCQ01831 940 aaPredicted RBP25.32■■□□□ 1.64
SMARCD2-203ENST00000448276 MRPL50Q8N5N7 158 aaKnown RBP25.32■■□□□ 1.64
SMARCD2-203ENST00000448276 PRKAR2BP31323 418 aa25.32■■□□□ 1.64
SMARCD2-203ENST00000448276 CALD1Q05682 793 aaKnown RBP25.32■■□□□ 1.64
SMARCD2-203ENST00000448276 LMBRD1Q9NUN5 540 aa25.32■■□□□ 1.64
SMARCD2-203ENST00000448276 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
SMARCD2-203ENST00000448276 VAMP4O75379 141 aa25.31■■□□□ 1.64
SMARCD2-203ENST00000448276 PRIM1P49642 420 aaKnown RBP25.31■■□□□ 1.64
SMARCD2-203ENST00000448276 CLEC17AQ6ZS10 378 aa25.31■■□□□ 1.64
SMARCD2-203ENST00000448276 HMOX1P09601 288 aa25.3■■□□□ 1.64
SMARCD2-203ENST00000448276 ZGPATQ8N5A5 531 aaKnown RBP25.3■■□□□ 1.64
SMARCD2-203ENST00000448276 ARID3AQ99856 593 aa25.3■■□□□ 1.64
SMARCD2-203ENST00000448276 FAM13BQ9NYF5 915 aa25.3■■□□□ 1.64
SMARCD2-203ENST00000448276 PHACTR3Q96KR7 559 aa25.3■■□□□ 1.64
SMARCD2-203ENST00000448276 PRPF40AO75400 957 aaKnown RBP25.29■■□□□ 1.64
SMARCD2-203ENST00000448276 FOXD4L5Q5VV16 416 aaPredicted RBP25.29■■□□□ 1.64
SMARCD2-203ENST00000448276 FOXD4L4Q8WXT5 416 aaPredicted RBP25.29■■□□□ 1.64
SMARCD2-203ENST00000448276 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.29■■□□□ 1.64
SMARCD2-203ENST00000448276 OTUD7AQ8TE49 926 aaPredicted RBP25.28■■□□□ 1.64
SMARCD2-203ENST00000448276 MINK1Q8N4C8 1332 aaPredicted RBP25.28■■□□□ 1.64
SMARCD2-203ENST00000448276 ZNF445P59923 1031 aa25.28■■□□□ 1.64
SMARCD2-203ENST00000448276 PLEKHM2Q8IWE5 1019 aa25.28■■□□□ 1.64
SMARCD2-203ENST00000448276 APBB1O00213 710 aa25.27■■□□□ 1.64
SMARCD2-203ENST00000448276 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.27■■□□□ 1.64
SMARCD2-203ENST00000448276 MED14O60244 1454 aa25.27■■□□□ 1.64
SMARCD2-203ENST00000448276 NPATQ14207 1427 aa25.26■■□□□ 1.64
SMARCD2-203ENST00000448276 GPT2Q8TD30 523 aa25.26■■□□□ 1.63
SMARCD2-203ENST00000448276 IBTKQ9P2D0 1353 aaPredicted RBP25.25■■□□□ 1.63
SMARCD2-203ENST00000448276 GLI2P10070 1586 aa25.25■■□□□ 1.63
SMARCD2-203ENST00000448276 RABEP1Q15276 862 aa25.25■■□□□ 1.63
SMARCD2-203ENST00000448276 NSFL1CQ9UNZ2 370 aaKnown RBP25.25■■□□□ 1.63
SMARCD2-203ENST00000448276 PPLO60437 1756 aa25.25■■□□□ 1.63
SMARCD2-203ENST00000448276 ZBTB7CA1YPR0 619 aa25.24■■□□□ 1.63
SMARCD2-203ENST00000448276 USP26Q9BXU7 913 aa25.24■■□□□ 1.63
SMARCD2-203ENST00000448276 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
SMARCD2-203ENST00000448276 CYP2E1P05181 493 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-203ENST00000448276 NUCB2P80303 420 aa25.22■■□□□ 1.63
SMARCD2-203ENST00000448276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMARCD2-203ENST00000448276 ZDHHC9Q9Y397 364 aa25.22■■□□□ 1.63
SMARCD2-203ENST00000448276 CYB5RLQ6IPT4 315 aa25.22■■□□□ 1.63
SMARCD2-203ENST00000448276 MBIPQ9NS73 344 aa25.22■■□□□ 1.63
SMARCD2-203ENST00000448276 FRMPD1Q5SYB0 1578 aa25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 NOL7Q9UMY1 257 aaKnown RBP25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 SMARCA5O60264 1052 aaPredicted RBP25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 FCHSD2O94868 740 aa25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 TTC22Q5TAA0 569 aa25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 PUS7Q96PZ0 661 aaKnown RBP25.21■■□□□ 1.63
SMARCD2-203ENST00000448276 SYCE3A1L190 88 aa25.2■■□□□ 1.62
SMARCD2-203ENST00000448276 LMTK2Q8IWU2 1503 aa25.2■■□□□ 1.62
SMARCD2-203ENST00000448276 BRPF1P55201 1214 aaPredicted RBP25.2■■□□□ 1.62
SMARCD2-203ENST00000448276 RNF214Q8ND24 703 aa25.2■■□□□ 1.62
SMARCD2-203ENST00000448276 ABCC4O15439 1325 aa25.2■■□□□ 1.62
SMARCD2-203ENST00000448276 TMEM63CQ9P1W3 806 aa25.19■■□□□ 1.62
SMARCD2-203ENST00000448276 HECW2Q9P2P5 1572 aa25.19■■□□□ 1.62
SMARCD2-203ENST00000448276 UQCRHLA0A096LP55 91 aa25.19■■□□□ 1.62
SMARCD2-203ENST00000448276 UQCRHP07919 91 aa25.19■■□□□ 1.62
SMARCD2-203ENST00000448276 LRRC7Q96NW7 1537 aa25.18■■□□□ 1.62
SMARCD2-203ENST00000448276 TWISTNBQ3B726 338 aaPredicted RBP25.18■■□□□ 1.62
SMARCD2-203ENST00000448276 PDLIM2Q96JY6 352 aa25.18■■□□□ 1.62
SMARCD2-203ENST00000448276 TERF2IPQ9NYB0 399 aa25.18■■□□□ 1.62
SMARCD2-203ENST00000448276 ARHGEF28Q8N1W1 1705 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-203ENST00000448276 CAMSAP1Q5T5Y3 1602 aa25.17■■□□□ 1.62
SMARCD2-203ENST00000448276 PTCH1Q13635 1447 aa25.17■■□□□ 1.62
SMARCD2-203ENST00000448276 ARHGAP45Q92619 1136 aa25.17■■□□□ 1.62
SMARCD2-203ENST00000448276 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
SMARCD2-203ENST00000448276 FAM83GA6ND36 823 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 NFE2L2Q16236 605 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 PRAM1Q96QH2 718 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 RPGRIP1LQ68CZ1 1315 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 SDSP20132 328 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
SMARCD2-203ENST00000448276 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
SMARCD2-203ENST00000448276 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
SMARCD2-203ENST00000448276 ZNF500O60304 480 aaPredicted RBP25.15■■□□□ 1.62
SMARCD2-203ENST00000448276 DCTPP1Q9H773 170 aa25.14■■□□□ 1.62
SMARCD2-203ENST00000448276 POLKQ9UBT6 870 aa25.14■■□□□ 1.62
SMARCD2-203ENST00000448276 MPNDQ8N594 471 aa25.14■■□□□ 1.62
SMARCD2-203ENST00000448276 PNPLA6Q8IY17 1366 aa25.14■■□□□ 1.61
SMARCD2-203ENST00000448276 ZNF428Q96B54 188 aa25.14■■□□□ 1.61
SMARCD2-203ENST00000448276 CD163L1Q9NR16 1453 aa25.13■■□□□ 1.61
SMARCD2-203ENST00000448276 INTS3Q68E01 1043 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-203ENST00000448276 ZKSCAN5Q9Y2L8 839 aa25.13■■□□□ 1.61
SMARCD2-203ENST00000448276 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 HS1BP3Q53T59 392 aa25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 FAM135BQ49AJ0 1406 aa25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 GNAI1P63096 354 aa25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 FOXD4L6Q3SYB3 417 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 FOXD4L3Q6VB84 417 aaPredicted RBP25.12■■□□□ 1.61
SMARCD2-203ENST00000448276 EMILIN1Q9Y6C2 1016 aa25.11■■□□□ 1.61
SMARCD2-203ENST00000448276 KRT24Q2M2I5 525 aa25.11■■□□□ 1.61
SMARCD2-203ENST00000448276 ABCC3O15438 1527 aa25.11■■□□□ 1.61
SMARCD2-203ENST00000448276 ST18O60284 1047 aa25.1■■□□□ 1.61
SMARCD2-203ENST00000448276 LRSAM1Q6UWE0 723 aa25.1■■□□□ 1.61
SMARCD2-203ENST00000448276 NOL8Q76FK4 1167 aaKnown RBP25.1■■□□□ 1.61
SMARCD2-203ENST00000448276 HDGFL2Q7Z4V5 671 aaPredicted RBP25.1■■□□□ 1.61
SMARCD2-203ENST00000448276 KNDC1Q76NI1 1749 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms