RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ZKSCAN2Q63HK3 967 aa25.09■■□□□ 1.61
FAM3A-215ENST00000447601 SBNO1A3KN83 1393 aa25.08■■□□□ 1.6
FAM3A-215ENST00000447601 MAP3K19Q56UN5 1328 aa25.08■■□□□ 1.6
FAM3A-215ENST00000447601 IFT57Q9NWB7 429 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 FLT4P35916 1363 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 GNAI1P63096 354 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 HSP90AB2PQ58FF8 381 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 ZNF428Q96B54 188 aa25.07■■□□□ 1.6
FAM3A-215ENST00000447601 RGPD8O14715 1765 aaPredicted RBP25.07■■□□□ 1.6
FAM3A-215ENST00000447601 SULT6B1Q6IMI4 303 aa25.06■■□□□ 1.6
FAM3A-215ENST00000447601 PEAK1Q9H792 1746 aa25.06■■□□□ 1.6
FAM3A-215ENST00000447601 PIK3C2AO00443 1686 aa25.06■■□□□ 1.6
FAM3A-215ENST00000447601 SOX12O15370 315 aa25.05■■□□□ 1.6
FAM3A-215ENST00000447601 RLBP1P12271 317 aa25.05■■□□□ 1.6
FAM3A-215ENST00000447601 NLRP6P59044 892 aa25.05■■□□□ 1.6
FAM3A-215ENST00000447601 SSH1Q8WYL5 1049 aa25.05■■□□□ 1.6
FAM3A-215ENST00000447601 PHF8Q9UPP1 1060 aa25.05■■□□□ 1.6
FAM3A-215ENST00000447601 ALDH1L2Q3SY69 923 aa25.04■■□□□ 1.6
FAM3A-215ENST00000447601 ARHGEF10O15013 1369 aa25.04■■□□□ 1.6
FAM3A-215ENST00000447601 FTSJ3Q8IY81 847 aaKnown RBP25.03■■□□□ 1.6
FAM3A-215ENST00000447601 LAS1LQ9Y4W2 734 aaKnown RBP25.03■■□□□ 1.6
FAM3A-215ENST00000447601 KIF24Q5T7B8 1368 aa25.03■■□□□ 1.6
FAM3A-215ENST00000447601 AEBP1Q8IUX7 1158 aa25.02■■□□□ 1.6
FAM3A-215ENST00000447601 DZIP1LQ8IYY4 767 aaKnown RBP25.02■■□□□ 1.6
FAM3A-215ENST00000447601 KIF16BQ96L93 1317 aa25.02■■□□□ 1.6
FAM3A-215ENST00000447601 ZNF853P0CG23 659 aa25.02■■□□□ 1.6
FAM3A-215ENST00000447601 AMPHP49418 695 aa25.01■■□□□ 1.59
FAM3A-215ENST00000447601 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
FAM3A-215ENST00000447601 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
FAM3A-215ENST00000447601 TNNQ9UQP3 1299 aa25.01■■□□□ 1.59
FAM3A-215ENST00000447601 RGPD1P0DJD0 1748 aa25■■□□□ 1.59
FAM3A-215ENST00000447601 CFAP44Q96MT7 982 aa25■■□□□ 1.59
FAM3A-215ENST00000447601 USP54Q70EL1 1684 aa24.99■■□□□ 1.59
FAM3A-215ENST00000447601 IPO8O15397 1037 aaKnown RBP24.99■■□□□ 1.59
FAM3A-215ENST00000447601 PDE4AP27815 886 aa24.99■■□□□ 1.59
FAM3A-215ENST00000447601 ATF7IPQ6VMQ6 1270 aa24.99■■□□□ 1.59
FAM3A-215ENST00000447601 ABTB2Q8N961 1025 aa24.99■■□□□ 1.59
FAM3A-215ENST00000447601 PAK3O75914 559 aaPredicted RBP24.98■■□□□ 1.59
FAM3A-215ENST00000447601 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
FAM3A-215ENST00000447601 TRIM27P14373 513 aa24.97■■□□□ 1.59
FAM3A-215ENST00000447601 BRPF1P55201 1214 aaPredicted RBP24.97■■□□□ 1.59
FAM3A-215ENST00000447601 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
FAM3A-215ENST00000447601 BACH2Q9BYV9 841 aa24.97■■□□□ 1.59
FAM3A-215ENST00000447601 MBIPQ9NS73 344 aa24.97■■□□□ 1.59
FAM3A-215ENST00000447601 IGHDP01880 384 aa24.96■■□□□ 1.59
FAM3A-215ENST00000447601 NOB1Q9ULX3 412 aaKnown RBP24.96■■□□□ 1.59
FAM3A-215ENST00000447601 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
FAM3A-215ENST00000447601 SKAP1Q86WV1 359 aa24.95■■□□□ 1.58
FAM3A-215ENST00000447601 FAM83GA6ND36 823 aa24.94■■□□□ 1.58
FAM3A-215ENST00000447601 KDRP35968 1356 aa24.94■■□□□ 1.58
FAM3A-215ENST00000447601 IGSF1Q8N6C5 1336 aa24.93■■□□□ 1.58
FAM3A-215ENST00000447601 VAMP4O75379 141 aa24.93■■□□□ 1.58
FAM3A-215ENST00000447601 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
FAM3A-215ENST00000447601 NUTM2GQ5VZR2 741 aa24.93■■□□□ 1.58
FAM3A-215ENST00000447601 ANP32AP39687 249 aaKnown RBP24.93■■□□□ 1.58
FAM3A-215ENST00000447601 DDX19BQ9UMR2 479 aa24.93■■□□□ 1.58
FAM3A-215ENST00000447601 HOXC9P31274 260 aa24.92■■□□□ 1.58
FAM3A-215ENST00000447601 RTL1A6NKG5 1358 aa24.92■■□□□ 1.58
FAM3A-215ENST00000447601 PSME1Q06323 249 aa24.91■■□□□ 1.58
FAM3A-215ENST00000447601 DCTN1Q14203 1278 aa24.91■■□□□ 1.58
FAM3A-215ENST00000447601 EYA1Q99502 592 aa24.91■■□□□ 1.58
FAM3A-215ENST00000447601 PCDHB15Q9Y5E8 787 aa24.91■■□□□ 1.58
FAM3A-215ENST00000447601 MARF1Q9Y4F3 1742 aaKnown RBP24.9■■□□□ 1.58
FAM3A-215ENST00000447601 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
FAM3A-215ENST00000447601 MSH5O43196 834 aa24.89■■□□□ 1.58
FAM3A-215ENST00000447601 TWISTNBQ3B726 338 aaPredicted RBP24.89■■□□□ 1.58
FAM3A-215ENST00000447601 ITPRIPQ8IWB1 547 aa24.89■■□□□ 1.58
FAM3A-215ENST00000447601 RWDD1Q9H446 243 aaPredicted RBP24.89■■□□□ 1.58
FAM3A-215ENST00000447601 TSPYL6Q8N831 410 aa24.89■■□□□ 1.57
FAM3A-215ENST00000447601 ARHGAP45Q92619 1136 aa24.88■■□□□ 1.57
FAM3A-215ENST00000447601 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
FAM3A-215ENST00000447601 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
FAM3A-215ENST00000447601 MRPL50Q8N5N7 158 aaKnown RBP24.87■■□□□ 1.57
FAM3A-215ENST00000447601 GAS2L2Q8NHY3 880 aa24.86■■□□□ 1.57
FAM3A-215ENST00000447601 CHL1O00533 1208 aa24.85■■□□□ 1.57
FAM3A-215ENST00000447601 RGS3P49796 1198 aa24.85■■□□□ 1.57
FAM3A-215ENST00000447601 TMEM57Q8N5G2 664 aa24.85■■□□□ 1.57
FAM3A-215ENST00000447601 KCNH5Q8NCM2 988 aa24.85■■□□□ 1.57
FAM3A-215ENST00000447601 MTHFSDQ2M296 383 aaKnown RBP24.84■■□□□ 1.57
FAM3A-215ENST00000447601 MCM10Q7L590 875 aa24.84■■□□□ 1.57
FAM3A-215ENST00000447601 C8orf58Q8NAV2 365 aa24.84■■□□□ 1.57
FAM3A-215ENST00000447601 FAM161AQ3B820 660 aa24.84■■□□□ 1.57
FAM3A-215ENST00000447601 RTF1Q92541 710 aaKnown RBP24.84■■□□□ 1.57
FAM3A-215ENST00000447601 ELL2O00472 640 aaPredicted RBP24.83■■□□□ 1.57
FAM3A-215ENST00000447601 NFAT5O94916 1531 aa24.82■■□□□ 1.56
FAM3A-215ENST00000447601 KIAA0232Q92628 1395 aa24.82■■□□□ 1.56
FAM3A-215ENST00000447601 CRB1P82279 1406 aa24.82■■□□□ 1.56
FAM3A-215ENST00000447601 ORAI2Q96SN7 254 aa24.82■■□□□ 1.56
FAM3A-215ENST00000447601 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
FAM3A-215ENST00000447601 IP6K1Q92551 441 aa24.81■■□□□ 1.56
FAM3A-215ENST00000447601 CHMP4BQ9H444 224 aaKnown RBP24.81■■□□□ 1.56
FAM3A-215ENST00000447601 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
FAM3A-215ENST00000447601 HDAC1Q13547 482 aaPredicted RBP24.79■■□□□ 1.56
FAM3A-215ENST00000447601 IPO9Q96P70 1041 aaKnown RBP24.79■■□□□ 1.56
FAM3A-215ENST00000447601 ZBTB40Q9NUA8 1239 aa24.79■■□□□ 1.56
FAM3A-215ENST00000447601 FOXO3O43524 673 aa24.78■■□□□ 1.56
FAM3A-215ENST00000447601 ERICH6Q7L0X2 663 aa24.78■■□□□ 1.56
FAM3A-215ENST00000447601 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
FAM3A-215ENST00000447601 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms