RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TNNQ9UQP3 1299 aa12.27□□□□□ -0.44
COL6A4P1-201ENST00000446690 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.45
COL6A4P1-201ENST00000446690 SMC4Q9NTJ3 1288 aa12.27□□□□□ -0.45
COL6A4P1-201ENST00000446690 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
COL6A4P1-201ENST00000446690 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.45
COL6A4P1-201ENST00000446690 ANKARQ7Z5J8 1434 aa12.26□□□□□ -0.45
COL6A4P1-201ENST00000446690 FAM83GA6ND36 823 aa12.26□□□□□ -0.45
COL6A4P1-201ENST00000446690 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
COL6A4P1-201ENST00000446690 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 CT47B1P0C2W7 299 aaPredicted RBP12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 PSME1Q06323 249 aa12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
COL6A4P1-201ENST00000446690 RLBP1P12271 317 aa12.24□□□□□ -0.45
COL6A4P1-201ENST00000446690 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
COL6A4P1-201ENST00000446690 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
COL6A4P1-201ENST00000446690 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 ZKSCAN2Q63HK3 967 aa12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
COL6A4P1-201ENST00000446690 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
COL6A4P1-201ENST00000446690 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
COL6A4P1-201ENST00000446690 GNAI1P63096 354 aa12.22□□□□□ -0.45
COL6A4P1-201ENST00000446690 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
COL6A4P1-201ENST00000446690 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 CHD2O14647 1828 aaKnown RBP12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 FLT4P35916 1363 aa12.21□□□□□ -0.45
COL6A4P1-201ENST00000446690 FOXO3O43524 673 aa12.21□□□□□ -0.46
COL6A4P1-201ENST00000446690 IGHDP01880 384 aa12.21□□□□□ -0.46
COL6A4P1-201ENST00000446690 IFT57Q9NWB7 429 aa12.21□□□□□ -0.46
COL6A4P1-201ENST00000446690 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 MCM10Q7L590 875 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 EYA1Q99502 592 aa12.2□□□□□ -0.46
COL6A4P1-201ENST00000446690 TRIM27P14373 513 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 HOXC9P31274 260 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 NALCNQ8IZF0 1738 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 PEAK1Q9H792 1746 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 MS4A1P11836 297 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 RGS3P49796 1198 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 ATF7IPQ6VMQ6 1270 aa12.19□□□□□ -0.46
COL6A4P1-201ENST00000446690 VAMP4O75379 141 aa12.18□□□□□ -0.46
COL6A4P1-201ENST00000446690 ZNF853P0CG23 659 aa12.18□□□□□ -0.46
COL6A4P1-201ENST00000446690 PDE4AP27815 886 aa12.18□□□□□ -0.46
COL6A4P1-201ENST00000446690 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
COL6A4P1-201ENST00000446690 PIK3C2AO00443 1686 aa12.18□□□□□ -0.46
COL6A4P1-201ENST00000446690 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 HSPA2P54652 639 aa12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
COL6A4P1-201ENST00000446690 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
COL6A4P1-201ENST00000446690 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
COL6A4P1-201ENST00000446690 KIF16BQ96L93 1317 aa12.16□□□□□ -0.46
COL6A4P1-201ENST00000446690 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 C19orf44Q9H6X5 657 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 MSH5O43196 834 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 AAMPQ13685 434 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 NPM2Q86SE8 214 aaKnown RBP12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 ZNF428Q96B54 188 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
COL6A4P1-201ENST00000446690 IGSF1Q8N6C5 1336 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 ATF3P18847 181 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
COL6A4P1-201ENST00000446690 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
COL6A4P1-201ENST00000446690 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
COL6A4P1-201ENST00000446690 CHL1O00533 1208 aa12.12□□□□□ -0.47
COL6A4P1-201ENST00000446690 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
COL6A4P1-201ENST00000446690 IP6K1Q92551 441 aa12.12□□□□□ -0.47
COL6A4P1-201ENST00000446690 ANP32AP39687 249 aaKnown RBP12.12□□□□□ -0.47
COL6A4P1-201ENST00000446690 GCP02774 474 aa12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 KDRP35968 1356 aa12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
COL6A4P1-201ENST00000446690 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
COL6A4P1-201ENST00000446690 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms