RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TSPYL6Q8N831 410 aa21.53■■□□□ 1.04
LAPTM4B-201ENST00000445593 SIRT1Q96EB6 747 aa21.53■■□□□ 1.04
LAPTM4B-201ENST00000445593 C3P01024 1663 aa21.53■■□□□ 1.04
LAPTM4B-201ENST00000445593 EIF4A2Q14240 407 aaKnown RBP21.52■■□□□ 1.04
LAPTM4B-201ENST00000445593 CDC42BPGQ6DT37 1551 aa21.52■■□□□ 1.04
LAPTM4B-201ENST00000445593 ZBTB7CA1YPR0 619 aa21.51■■□□□ 1.03
LAPTM4B-201ENST00000445593 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
LAPTM4B-201ENST00000445593 MVPQ14764 893 aaKnown RBP21.5■■□□□ 1.03
LAPTM4B-201ENST00000445593 LTV1Q96GA3 475 aaPredicted RBP21.49■■□□□ 1.03
LAPTM4B-201ENST00000445593 SLC4A3P48751 1232 aa21.49■■□□□ 1.03
LAPTM4B-201ENST00000445593 FER1L4A9Z1Z3 1794 aa21.49■■□□□ 1.03
LAPTM4B-201ENST00000445593 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
LAPTM4B-201ENST00000445593 MCM10Q7L590 875 aa21.48■■□□□ 1.03
LAPTM4B-201ENST00000445593 TMEM57Q8N5G2 664 aa21.48■■□□□ 1.03
LAPTM4B-201ENST00000445593 NLRP6P59044 892 aa21.47■■□□□ 1.03
LAPTM4B-201ENST00000445593 ATF7IPQ6VMQ6 1270 aa21.47■■□□□ 1.03
LAPTM4B-201ENST00000445593 MBIPQ9NS73 344 aa21.47■■□□□ 1.03
LAPTM4B-201ENST00000445593 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
LAPTM4B-201ENST00000445593 PLEKHG3A1L390 1219 aa21.46■■□□□ 1.03
LAPTM4B-201ENST00000445593 USP6P35125 1406 aa21.46■■□□□ 1.03
LAPTM4B-201ENST00000445593 AMPHP49418 695 aa21.46■■□□□ 1.03
LAPTM4B-201ENST00000445593 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
LAPTM4B-201ENST00000445593 C8orf34Q49A92 452 aa21.45■■□□□ 1.02
LAPTM4B-201ENST00000445593 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
LAPTM4B-201ENST00000445593 MAP3K19Q56UN5 1328 aa21.44■■□□□ 1.02
LAPTM4B-201ENST00000445593 FOXO3O43524 673 aa21.44■■□□□ 1.02
LAPTM4B-201ENST00000445593 CDK12Q9NYV4 1490 aaPredicted RBP21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 AATKQ6ZMQ8 1374 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 C1orf115Q9H7X2 142 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 IL16Q14005 1332 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 PDZRN3Q9UPQ7 1066 aa21.43■■□□□ 1.02
LAPTM4B-201ENST00000445593 ITSN1Q15811 1721 aa21.42■■□□□ 1.02
LAPTM4B-201ENST00000445593 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
LAPTM4B-201ENST00000445593 ABTB2Q8N961 1025 aa21.41■■□□□ 1.02
LAPTM4B-201ENST00000445593 GNAI1P63096 354 aa21.41■■□□□ 1.02
LAPTM4B-201ENST00000445593 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
LAPTM4B-201ENST00000445593 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
LAPTM4B-201ENST00000445593 MON2Q7Z3U7 1717 aa21.4■■□□□ 1.02
LAPTM4B-201ENST00000445593 RWDD1Q9H446 243 aaPredicted RBP21.4■■□□□ 1.02
LAPTM4B-201ENST00000445593 VAMP4O75379 141 aa21.39■■□□□ 1.02
LAPTM4B-201ENST00000445593 LMOD2Q6P5Q4 547 aa21.39■■□□□ 1.02
LAPTM4B-201ENST00000445593 CT47B1P0C2W7 299 aaPredicted RBP21.39■■□□□ 1.01
LAPTM4B-201ENST00000445593 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
LAPTM4B-201ENST00000445593 ARHGAP23Q9P227 1491 aa21.38■■□□□ 1.01
LAPTM4B-201ENST00000445593 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 SLIT1O75093 1534 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 RGPD8O14715 1765 aaPredicted RBP21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 SEC24BO95487 1268 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 IFT57Q9NWB7 429 aa21.37■■□□□ 1.01
LAPTM4B-201ENST00000445593 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
LAPTM4B-201ENST00000445593 CALD1Q05682 793 aaKnown RBP21.36■■□□□ 1.01
LAPTM4B-201ENST00000445593 AKAP12Q02952 1782 aa21.35■■□□□ 1.01
LAPTM4B-201ENST00000445593 CFAP44Q96MT7 982 aa21.35■■□□□ 1.01
LAPTM4B-201ENST00000445593 RIMS1Q86UR5 1692 aaKnown RBP21.35■■□□□ 1.01
LAPTM4B-201ENST00000445593 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
LAPTM4B-201ENST00000445593 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
LAPTM4B-201ENST00000445593 UBE2Q2Q8WVN8 375 aa21.34■■□□□ 1.01
LAPTM4B-201ENST00000445593 EYA1Q99502 592 aa21.33■■□□□ 1.01
LAPTM4B-201ENST00000445593 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
LAPTM4B-201ENST00000445593 MTHFSDQ2M296 383 aaKnown RBP21.32■■□□□ 1
LAPTM4B-201ENST00000445593 IL27Q8NEV9 243 aa21.32■■□□□ 1
LAPTM4B-201ENST00000445593 PTCH1Q13635 1447 aa21.31■■□□□ 1
LAPTM4B-201ENST00000445593 NECTIN2Q92692 538 aa21.31■■□□□ 1
LAPTM4B-201ENST00000445593 DAXXQ9UER7 740 aaPredicted RBP21.31■■□□□ 1
LAPTM4B-201ENST00000445593 ZNF853P0CG23 659 aa21.31■■□□□ 1
LAPTM4B-201ENST00000445593 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
LAPTM4B-201ENST00000445593 PHF8Q9UPP1 1060 aa21.31■■□□□ 1
LAPTM4B-201ENST00000445593 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
LAPTM4B-201ENST00000445593 TTC21AQ8NDW8 1320 aa21.3■■□□□ 1
LAPTM4B-201ENST00000445593 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
LAPTM4B-201ENST00000445593 PSME1Q06323 249 aa21.29■■□□□ 1
LAPTM4B-201ENST00000445593 LNPKQ9C0E8 428 aa21.29■■□□□ 1
LAPTM4B-201ENST00000445593 ZBTB40Q9NUA8 1239 aa21.29■■□□□ 1
LAPTM4B-201ENST00000445593 PEAK1Q9H792 1746 aa21.28■■□□□ 1
LAPTM4B-201ENST00000445593 ORAI2Q96SN7 254 aa21.28■■□□□ 1
LAPTM4B-201ENST00000445593 FLT4P35916 1363 aa21.27■■□□□ 1
LAPTM4B-201ENST00000445593 SETD1BQ9UPS6 1966 aaKnown RBP21.27■■□□□ 1
LAPTM4B-201ENST00000445593 SSH2Q76I76 1423 aa21.27■■□□□ 1
LAPTM4B-201ENST00000445593 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
LAPTM4B-201ENST00000445593 TOPAZ1Q8N9V7 1692 aa21.26■□□□□ 0.99
LAPTM4B-201ENST00000445593 USP31Q70CQ4 1352 aa21.26■□□□□ 0.99
LAPTM4B-201ENST00000445593 HOXC9P31274 260 aa21.26■□□□□ 0.99
LAPTM4B-201ENST00000445593 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
LAPTM4B-201ENST00000445593 NRKQ7Z2Y5 1582 aa21.25■□□□□ 0.99
LAPTM4B-201ENST00000445593 SBNO1A3KN83 1393 aa21.24■□□□□ 0.99
LAPTM4B-201ENST00000445593 APBB1O00213 710 aa21.23■□□□□ 0.99
LAPTM4B-201ENST00000445593 AAMPQ13685 434 aa21.23■□□□□ 0.99
LAPTM4B-201ENST00000445593 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
LAPTM4B-201ENST00000445593 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
LAPTM4B-201ENST00000445593 ZBTB7BO15156 539 aaPredicted RBP21.21■□□□□ 0.99
LAPTM4B-201ENST00000445593 ANKRD45Q5TZF3 282 aa21.21■□□□□ 0.99
LAPTM4B-201ENST00000445593 PKNOX2Q96KN3 472 aa21.21■□□□□ 0.99
LAPTM4B-201ENST00000445593 CHL1O00533 1208 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms