RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 FAM13BQ9NYF5 915 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
TOP3B-210ENST00000444502 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 AAMPQ13685 434 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 CABLES1Q8TDN4 633 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 PTPRTO14522 1441 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-210ENST00000444502 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 TSPOAP1O95153 1857 aa13.02□□□□□ -0.32
TOP3B-210ENST00000444502 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 POLKQ9UBT6 870 aa13.02□□□□□ -0.32
TOP3B-210ENST00000444502 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 MYL6BP14649 208 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 CABP4P57796 275 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-210ENST00000444502 NSD2O96028 1365 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
TOP3B-210ENST00000444502 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
TOP3B-210ENST00000444502 KLHL34Q8N239 644 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 TRPM2O94759 1503 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 MCCP23508 829 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 LTKP29376 864 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 G3V3G9 751 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 GPATCH3Q96I76 525 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 FOXD4L5Q5VV16 416 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 FOXD4L4Q8WXT5 416 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 PRDM10Q9NQV6 1147 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-210ENST00000444502 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
TOP3B-210ENST00000444502 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.34
TOP3B-210ENST00000444502 UNC13BO14795 1591 aa12.96□□□□□ -0.34
TOP3B-210ENST00000444502 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-210ENST00000444502 NEO1Q92859 1461 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 PPIP5K1Q6PFW1 1433 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
TOP3B-210ENST00000444502 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 SEC24BO95487 1268 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 MSH6P52701 1360 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 CLTCL1P53675 1640 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
TOP3B-210ENST00000444502 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
TOP3B-210ENST00000444502 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 F6X3S4 739 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 MSNP26038 577 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 C8orf58Q8NAV2 365 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 LRRC59Q96AG4 307 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms