RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 USP6P35125 1406 aa28.56■■■□□ 2.16
PREB-206ENST00000444452 ACEP12821 1306 aa28.56■■■□□ 2.16
PREB-206ENST00000444452 RRS1Q15050 365 aaKnown RBP28.56■■■□□ 2.16
PREB-206ENST00000444452 RWDD1Q9H446 243 aaPredicted RBP28.56■■■□□ 2.16
PREB-206ENST00000444452 TBX22Q9Y458 520 aa28.56■■■□□ 2.16
PREB-206ENST00000444452 VIRMAQ69YN4 1812 aaKnown RBP28.55■■■□□ 2.16
PREB-206ENST00000444452 SLC26A8Q96RN1 970 aa28.55■■■□□ 2.16
PREB-206ENST00000444452 DDX19BQ9UMR2 479 aa28.54■■■□□ 2.16
PREB-206ENST00000444452 BRPF1P55201 1214 aaPredicted RBP28.53■■■□□ 2.16
PREB-206ENST00000444452 NALCNQ8IZF0 1738 aa28.53■■■□□ 2.16
PREB-206ENST00000444452 IPO8O15397 1037 aaKnown RBP28.52■■■□□ 2.16
PREB-206ENST00000444452 NOB1Q9ULX3 412 aaKnown RBP28.52■■■□□ 2.16
PREB-206ENST00000444452 LMOD3Q0VAK6 560 aa28.52■■■□□ 2.16
PREB-206ENST00000444452 IFT57Q9NWB7 429 aa28.52■■■□□ 2.16
PREB-206ENST00000444452 AMOTL2Q9Y2J4 779 aa28.51■■■□□ 2.15
PREB-206ENST00000444452 SSH2Q76I76 1423 aa28.51■■■□□ 2.15
PREB-206ENST00000444452 GNAI1P63096 354 aa28.5■■■□□ 2.15
PREB-206ENST00000444452 THEMISQ8N1K5 641 aaPredicted RBP28.5■■■□□ 2.15
PREB-206ENST00000444452 ZNF853P0CG23 659 aa28.49■■■□□ 2.15
PREB-206ENST00000444452 USP31Q70CQ4 1352 aa28.49■■■□□ 2.15
PREB-206ENST00000444452 ITPRIPQ8IWB1 547 aa28.47■■■□□ 2.15
PREB-206ENST00000444452 PDZRN3Q9UPQ7 1066 aa28.46■■■□□ 2.15
PREB-206ENST00000444452 DLG5Q8TDM6 1919 aa28.45■■■□□ 2.15
PREB-206ENST00000444452 HDAC1Q13547 482 aaPredicted RBP28.45■■■□□ 2.15
PREB-206ENST00000444452 LAS1LQ9Y4W2 734 aaKnown RBP28.45■■■□□ 2.15
PREB-206ENST00000444452 XRN1Q8IZH2 1706 aaKnown RBP28.45■■■□□ 2.14
PREB-206ENST00000444452 THUMPD2Q9BTF0 503 aaKnown RBP28.45■■■□□ 2.14
PREB-206ENST00000444452 TTC21AQ8NDW8 1320 aa28.45■■■□□ 2.14
PREB-206ENST00000444452 TMEM57Q8N5G2 664 aa28.44■■■□□ 2.14
PREB-206ENST00000444452 VAMP4O75379 141 aa28.43■■■□□ 2.14
PREB-206ENST00000444452 EIF4A2Q14240 407 aaKnown RBP28.43■■■□□ 2.14
PREB-206ENST00000444452 NUTM2FA1L443 756 aa28.43■■■□□ 2.14
PREB-206ENST00000444452 CFAP44Q96MT7 982 aa28.43■■■□□ 2.14
PREB-206ENST00000444452 MBIPQ9NS73 344 aa28.42■■■□□ 2.14
PREB-206ENST00000444452 PEAK1Q9H792 1746 aa28.41■■■□□ 2.14
PREB-206ENST00000444452 RIMS1Q86UR5 1692 aaKnown RBP28.41■■■□□ 2.14
PREB-206ENST00000444452 NBR1Q14596 966 aa28.41■■■□□ 2.14
PREB-206ENST00000444452 ARHGAP45Q92619 1136 aa28.41■■■□□ 2.14
PREB-206ENST00000444452 ZBTB40Q9NUA8 1239 aa28.41■■■□□ 2.14
PREB-206ENST00000444452 RGPD1P0DJD0 1748 aa28.4■■■□□ 2.14
PREB-206ENST00000444452 PIK3R4Q99570 1358 aa28.38■■■□□ 2.13
PREB-206ENST00000444452 MRPL50Q8N5N7 158 aaKnown RBP28.38■■■□□ 2.13
PREB-206ENST00000444452 ANKARQ7Z5J8 1434 aa28.36■■■□□ 2.13
PREB-206ENST00000444452 SULT6B1Q6IMI4 303 aa28.36■■■□□ 2.13
PREB-206ENST00000444452 TSPYL6Q8N831 410 aa28.36■■■□□ 2.13
PREB-206ENST00000444452 CEP170BQ9Y4F5 1589 aaPredicted RBP28.35■■■□□ 2.13
PREB-206ENST00000444452 PLPPR3Q6T4P5 718 aa28.35■■■□□ 2.13
PREB-206ENST00000444452 USP19O94966 1318 aa28.35■■■□□ 2.13
PREB-206ENST00000444452 AEBP1Q8IUX7 1158 aa28.35■■■□□ 2.13
PREB-206ENST00000444452 TWISTNBQ3B726 338 aaPredicted RBP28.34■■■□□ 2.13
PREB-206ENST00000444452 SMC5Q8IY18 1101 aa28.34■■■□□ 2.13
PREB-206ENST00000444452 CHMP4BQ9H444 224 aaKnown RBP28.33■■■□□ 2.13
PREB-206ENST00000444452 FAM83GA6ND36 823 aa28.33■■■□□ 2.13
PREB-206ENST00000444452 HSP90AB2PQ58FF8 381 aa28.33■■■□□ 2.13
PREB-206ENST00000444452 ARHGEF10O15013 1369 aa28.32■■■□□ 2.12
PREB-206ENST00000444452 NGDNQ8NEJ9 315 aaKnown RBP28.31■■■□□ 2.12
PREB-206ENST00000444452 SBNO1A3KN83 1393 aa28.3■■■□□ 2.12
PREB-206ENST00000444452 RGPD8O14715 1765 aaPredicted RBP28.3■■■□□ 2.12
PREB-206ENST00000444452 DAXXQ9UER7 740 aaPredicted RBP28.3■■■□□ 2.12
PREB-206ENST00000444452 FMN2Q9NZ56 1722 aa28.3■■■□□ 2.12
PREB-206ENST00000444452 FLT4P35916 1363 aa28.3■■■□□ 2.12
PREB-206ENST00000444452 RTL5Q5HYW3 569 aaPredicted RBP28.3■■■□□ 2.12
PREB-206ENST00000444452 MAP3K19Q56UN5 1328 aa28.29■■■□□ 2.12
PREB-206ENST00000444452 PIK3C2AO00443 1686 aa28.29■■■□□ 2.12
PREB-206ENST00000444452 C8orf58Q8NAV2 365 aa28.29■■■□□ 2.12
PREB-206ENST00000444452 ABCC4O15439 1325 aa28.29■■■□□ 2.12
PREB-206ENST00000444452 SEC24BO95487 1268 aa28.28■■■□□ 2.12
PREB-206ENST00000444452 DCTN1Q14203 1278 aa28.28■■■□□ 2.12
PREB-206ENST00000444452 ZBTB7BO15156 539 aaPredicted RBP28.26■■■□□ 2.12
PREB-206ENST00000444452 KCNA6P17658 529 aa28.26■■■□□ 2.12
PREB-206ENST00000444452 USP35Q9P2H5 1018 aa28.26■■■□□ 2.12
PREB-206ENST00000444452 ELL2O00472 640 aaPredicted RBP28.26■■■□□ 2.11
PREB-206ENST00000444452 HAP1P54257 671 aaPredicted RBP28.25■■■□□ 2.11
PREB-206ENST00000444452 KDRP35968 1356 aa28.25■■■□□ 2.11
PREB-206ENST00000444452 USP54Q70EL1 1684 aa28.24■■■□□ 2.11
PREB-206ENST00000444452 CHL1O00533 1208 aa28.24■■■□□ 2.11
PREB-206ENST00000444452 API5Q9BZZ5 524 aaKnown RBP28.24■■■□□ 2.11
PREB-206ENST00000444452 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
PREB-206ENST00000444452 KIF24Q5T7B8 1368 aa28.22■■■□□ 2.11
PREB-206ENST00000444452 TRHP20396 242 aaPredicted RBP28.22■■■□□ 2.11
PREB-206ENST00000444452 UPF2Q9HAU5 1272 aaKnown RBP28.22■■■□□ 2.11
PREB-206ENST00000444452 SOX12O15370 315 aa28.21■■■□□ 2.11
PREB-206ENST00000444452 SLC4A3P48751 1232 aa28.21■■■□□ 2.11
PREB-206ENST00000444452 NUCB1Q02818 461 aa28.2■■■□□ 2.11
PREB-206ENST00000444452 ZNF142P52746 1687 aaPredicted RBP28.2■■■□□ 2.1
PREB-206ENST00000444452 IGSF1Q8N6C5 1336 aa28.19■■■□□ 2.1
PREB-206ENST00000444452 CRB1P82279 1406 aa28.19■■■□□ 2.1
PREB-206ENST00000444452 MCM10Q7L590 875 aa28.18■■■□□ 2.1
PREB-206ENST00000444452 TBC1D32Q96NH3 1257 aa28.18■■■□□ 2.1
PREB-206ENST00000444452 AMPHP49418 695 aa28.17■■■□□ 2.1
PREB-206ENST00000444452 MARF1Q9Y4F3 1742 aaKnown RBP28.17■■■□□ 2.1
PREB-206ENST00000444452 NLRP6P59044 892 aa28.16■■■□□ 2.1
PREB-206ENST00000444452 GCC1Q96CN9 775 aa28.16■■■□□ 2.1
PREB-206ENST00000444452 CHD2O14647 1828 aaKnown RBP28.16■■■□□ 2.1
PREB-206ENST00000444452 DEKP35659 375 aaKnown RBP28.14■■■□□ 2.1
PREB-206ENST00000444452 ANKLE2Q86XL3 938 aa28.14■■■□□ 2.1
PREB-206ENST00000444452 EYA1Q99502 592 aa28.14■■■□□ 2.09
PREB-206ENST00000444452 CHD1LQ86WJ1 897 aa28.13■■■□□ 2.09
PREB-206ENST00000444452 MTHFSDQ2M296 383 aaKnown RBP28.13■■■□□ 2.09
PREB-206ENST00000444452 BECN1Q14457 450 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms