RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 MSH6P52701 1360 aa19.1■□□□□ 0.65
LINC00299-202ENST00000442956 RIPK4P57078 832 aa19.1■□□□□ 0.65
LINC00299-202ENST00000442956 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
LINC00299-202ENST00000442956 TRIM35Q9UPQ4 493 aa19.09■□□□□ 0.65
LINC00299-202ENST00000442956 KRT28Q7Z3Y7 464 aa19.09■□□□□ 0.65
LINC00299-202ENST00000442956 USP54Q70EL1 1684 aa19.09■□□□□ 0.65
LINC00299-202ENST00000442956 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.64
LINC00299-202ENST00000442956 KIF1AQ12756 1690 aa19.07■□□□□ 0.64
LINC00299-202ENST00000442956 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
LINC00299-202ENST00000442956 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
LINC00299-202ENST00000442956 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
LINC00299-202ENST00000442956 NFE2L2Q16236 605 aa19.06■□□□□ 0.64
LINC00299-202ENST00000442956 HOXC9P31274 260 aa19.06■□□□□ 0.64
LINC00299-202ENST00000442956 LMOD2Q6P5Q4 547 aa19.05■□□□□ 0.64
LINC00299-202ENST00000442956 PPP4R2Q9NY27 417 aa19.05■□□□□ 0.64
LINC00299-202ENST00000442956 KCNH5Q8NCM2 988 aa19.05■□□□□ 0.64
LINC00299-202ENST00000442956 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
LINC00299-202ENST00000442956 ARHGEF10O15013 1369 aa19.03■□□□□ 0.64
LINC00299-202ENST00000442956 PLIN1O60240 522 aa19.02■□□□□ 0.64
LINC00299-202ENST00000442956 DDX17Q92841 729 aaKnown RBP19.02■□□□□ 0.64
LINC00299-202ENST00000442956 NFAT5O94916 1531 aa19.02■□□□□ 0.64
LINC00299-202ENST00000442956 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 IL16Q14005 1332 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 GCP02774 474 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 EYA1Q99502 592 aa19.01■□□□□ 0.63
LINC00299-202ENST00000442956 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
LINC00299-202ENST00000442956 XIRP1Q702N8 1843 aaKnown RBP19■□□□□ 0.63
LINC00299-202ENST00000442956 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
LINC00299-202ENST00000442956 USP19O94966 1318 aa19■□□□□ 0.63
LINC00299-202ENST00000442956 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
LINC00299-202ENST00000442956 IP6K1Q92551 441 aa18.99■□□□□ 0.63
LINC00299-202ENST00000442956 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
LINC00299-202ENST00000442956 FANCIQ9NVI1 1328 aa18.99■□□□□ 0.63
LINC00299-202ENST00000442956 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
LINC00299-202ENST00000442956 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
LINC00299-202ENST00000442956 BRINP3Q76B58 766 aa18.97■□□□□ 0.63
LINC00299-202ENST00000442956 KDRP35968 1356 aa18.97■□□□□ 0.63
LINC00299-202ENST00000442956 SLIT3O75094 1523 aa18.97■□□□□ 0.63
LINC00299-202ENST00000442956 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
LINC00299-202ENST00000442956 BCAR3O75815 825 aa18.96■□□□□ 0.63
LINC00299-202ENST00000442956 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
LINC00299-202ENST00000442956 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
LINC00299-202ENST00000442956 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
LINC00299-202ENST00000442956 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
LINC00299-202ENST00000442956 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
LINC00299-202ENST00000442956 CALD1Q05682 793 aaKnown RBP18.95■□□□□ 0.62
LINC00299-202ENST00000442956 EXOC6Q8TAG9 804 aa18.95■□□□□ 0.62
LINC00299-202ENST00000442956 PELP1Q8IZL8 1130 aaKnown RBP18.95■□□□□ 0.62
LINC00299-202ENST00000442956 C20orf194Q5TEA3 1177 aa18.94■□□□□ 0.62
LINC00299-202ENST00000442956 PXDNQ92626 1479 aa18.93■□□□□ 0.62
LINC00299-202ENST00000442956 LTN1O94822 1766 aa18.93■□□□□ 0.62
LINC00299-202ENST00000442956 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
LINC00299-202ENST00000442956 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
LINC00299-202ENST00000442956 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
LINC00299-202ENST00000442956 EXOSC9Q06265 439 aaKnown RBP18.93■□□□□ 0.62
LINC00299-202ENST00000442956 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
LINC00299-202ENST00000442956 LAS1LQ9Y4W2 734 aaKnown RBP18.92■□□□□ 0.62
LINC00299-202ENST00000442956 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
LINC00299-202ENST00000442956 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
LINC00299-202ENST00000442956 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
LINC00299-202ENST00000442956 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
LINC00299-202ENST00000442956 IFT57Q9NWB7 429 aa18.91■□□□□ 0.62
LINC00299-202ENST00000442956 MTHFSDQ2M296 383 aaKnown RBP18.9■□□□□ 0.62
LINC00299-202ENST00000442956 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
LINC00299-202ENST00000442956 MED1Q15648 1581 aaPredicted RBP18.9■□□□□ 0.62
LINC00299-202ENST00000442956 GNAI1P63096 354 aa18.9■□□□□ 0.62
LINC00299-202ENST00000442956 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
LINC00299-202ENST00000442956 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
LINC00299-202ENST00000442956 USHBP1Q8N6Y0 703 aa18.89■□□□□ 0.61
LINC00299-202ENST00000442956 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
LINC00299-202ENST00000442956 NBPF6Q5VWK0 638 aa18.89■□□□□ 0.61
LINC00299-202ENST00000442956 NBPF4Q96M43 638 aa18.89■□□□□ 0.61
LINC00299-202ENST00000442956 GAS2L2Q8NHY3 880 aa18.88■□□□□ 0.61
LINC00299-202ENST00000442956 CABLES1Q8TDN4 633 aa18.88■□□□□ 0.61
LINC00299-202ENST00000442956 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
LINC00299-202ENST00000442956 BCL2L13Q9BXK5 485 aa18.88■□□□□ 0.61
LINC00299-202ENST00000442956 MCM10Q7L590 875 aa18.87■□□□□ 0.61
LINC00299-202ENST00000442956 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
LINC00299-202ENST00000442956 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
LINC00299-202ENST00000442956 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
LINC00299-202ENST00000442956 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
LINC00299-202ENST00000442956 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
LINC00299-202ENST00000442956 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
LINC00299-202ENST00000442956 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
LINC00299-202ENST00000442956 MBIPQ9NS73 344 aa18.86■□□□□ 0.61
LINC00299-202ENST00000442956 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
LINC00299-202ENST00000442956 PDE3AQ14432 1141 aa18.83■□□□□ 0.61
LINC00299-202ENST00000442956 SMC4Q9NTJ3 1288 aa18.83■□□□□ 0.6
LINC00299-202ENST00000442956 SSH1Q8WYL5 1049 aa18.82■□□□□ 0.6
LINC00299-202ENST00000442956 ERBB3P21860 1342 aa18.81■□□□□ 0.6
LINC00299-202ENST00000442956 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
LINC00299-202ENST00000442956 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
LINC00299-202ENST00000442956 CRB1P82279 1406 aa18.8■□□□□ 0.6
LINC00299-202ENST00000442956 CHL1O00533 1208 aa18.8■□□□□ 0.6
LINC00299-202ENST00000442956 TSPYL6Q8N831 410 aa18.79■□□□□ 0.6
LINC00299-202ENST00000442956 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
LINC00299-202ENST00000442956 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
LINC00299-202ENST00000442956 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms